LOC120093932 (U7 small nuclear RNA) - Rat Genome Database

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Gene: LOC120093932 (U7 small nuclear RNA) Rattus norvegicus
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Symbol: LOC120093932
Name: U7 small nuclear RNA
RGD ID: 41091710
Description:
Type: snrna
RefSeq Status: MODEL
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8788,561,666 - 88,561,729 (-)NCBIGRCr8
mRatBN7.2786,671,918 - 86,671,981 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl786,671,918 - 86,671,981 (-)EnsemblmRatBN7.2 Ensembl
Cytogenetic Map7q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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1 to 10 of 44 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1300179Kidm5Kidney mass QTL 53.51kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)743747012135012528Rat
2293667Bss42Bone structure and strength QTL 427.250.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra cross-sectional area (CMO:0001689)74765143992651439Rat
10053722Scort27Serum corticosterone level QTL 272.410.0083blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)74322875088228750Rat
1331728Bp214Blood pressure QTL 2142.825arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)780221299124373579Rat
2317035Aia16Adjuvant induced arthritis QTL 162.71joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)759238038104238038Rat
2298475Eau6Experimental allergic uveoretinitis QTL 60.0029uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)784257275129257275Rat
71114Niddm14Non-insulin dependent diabetes mellitus QTL 144.5blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)784257275129257275Rat
2293678Bss24Bone structure and strength QTL 246.710.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)74765143992651439Rat
1358361Sradr5Stress Responsive Adrenal Weight QTL 55.55adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)743747012108555253Rat
1357338Stl17Serum triglyceride level QTL 173.23blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)769736356112729554Rat

1 to 10 of 44 rows





RefSeq Transcripts XR_005487644 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000090983
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl786,671,918 - 86,671,981 (-)Ensembl
RefSeq Acc Id: XR_005487644
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8788,561,666 - 88,561,729 (-)NCBI
mRatBN7.2786,671,918 - 86,671,981 (-)NCBI

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



Database
Acc Id
Source(s)
BioCyc Gene G2FUF-33378 BioCyc
Ensembl Genes ENSRNOG00000067964 Ensembl
NCBI Gene LOC120093932 ENTREZGENE
PhenoGen LOC120093932 PhenoGen
RatGTEx ENSRNOG00000067964 RatGTEx
RNAcentral URS000072B412 RNACentral


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-01-27 LOC120093932  U7 small nuclear RNA      Symbol and Name status set to provisional 70820 PROVISIONAL