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Gene: Cpsf1 (cleavage and polyadenylation specific factor 1) Rattus norvegicus
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Symbol: Cpsf1
Name: cleavage and polyadenylation specific factor 1
Description: Predicted to have enzyme binding activity and mRNA 3'-UTR AU-rich region binding activity. Predicted to be involved in mRNA polyadenylation. Predicted to localize to the mRNA cleavage and polyadenylation specificity factor complex. Orthologous to human CPSF1 (cleavage and polyadenylation specific factor 1); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; mRNA decay pathway; INTERACTS WITH 2,6-dinitrotoluene; amphetamine; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: cleavage and polyadenylation specific factor 1, 160kDa; cleavage and polyadenylation specificity factor subunit 1; LOC366952; MGC188689
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07117,661,779 - 117,672,373 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7117,661,661 - 117,672,373 (-)Ensembl
Rnor_5.07117,649,863 - 117,660,456 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47114,647,975 - 114,658,568 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.17114,682,284 - 114,692,737 (-)NCBI
Celera7104,669,635 - 104,680,226 (-)NCBICelera
Cytogenetic Map7q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Cpsf1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1306406
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.