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Gene: Lrrc6 (leucine rich repeat containing 6) Rattus norvegicus
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Symbol: Lrrc6
Name: leucine rich repeat containing 6
Description: Predicted to be involved in several processes, including cilium assembly; epithelial cilium movement involved in extracellular fluid movement; and flagellated sperm motility. Predicted to localize to apical cytoplasm; cilium; and cytosol. Human ortholog(s) of this gene implicated in primary ciliary dyskinesia 19. Orthologous to human LRRC6 (leucine rich repeat containing 6); INTERACTS WITH 2,5-hexanedione; 6-propyl-2-thiouracil; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: leucine rich repeat containing 6 (testis); leucine-rich testis-specific protein; LOC299920; Lrtp; MGC114437; similar to testis specific protein; Tslrp
Orthologs:
Homo sapiens (human) : LRRC6 (leucine rich repeat containing 6)  HGNC  Alliance
Mus musculus (house mouse) : Lrrc6 (leucine rich repeat containing 6 (testis))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Lrrc6 (leucine rich repeat containing 6)
Pan paniscus (bonobo/pygmy chimpanzee) : LRRC6 (leucine rich repeat containing 6)
Canis lupus familiaris (dog) : LRRC6 (leucine rich repeat containing 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Lrrc6 (leucine rich repeat containing 6)
Sus scrofa (pig) : LRRC6 (leucine rich repeat containing 6)
Chlorocebus sabaeus (African green monkey) : LRRC6 (leucine rich repeat containing 6)
Heterocephalus glaber (naked mole-rat) : Lrrc6 (leucine rich repeat containing 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07107,130,402 - 107,231,507 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7107,130,402 - 107,223,047 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07107,265,345 - 107,276,742 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.07107,073,711 - 107,174,936 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47103,747,640 - 103,851,124 (-)NCBIRGSC3.4rn4RGSC3.4
Celera794,698,248 - 94,798,326 (-)NCBICelera
Cytogenetic Map7q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Lrrc6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1559937
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-07-28
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.