Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Cyc1 (cytochrome c-1) Rattus norvegicus
Analyze
Symbol: Cyc1
Name: cytochrome c-1
Description: Predicted to have electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity. Involved in response to glucagon. Localizes to the mitochondrion. Human ortholog(s) of this gene implicated in mitochondrial complex III deficiency nuclear type 6. Orthologous to human CYC1 (cytochrome c1); PARTICIPATES IN Alzheimer's disease pathway; Huntington's disease pathway; oxidative phosphorylation pathway; INTERACTS WITH 2,2,2-tetramine; acetylsalicylic acid; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC300047
Orthologs:
Homo sapiens (human) : CYC1 (cytochrome c1)  HGNC  Alliance
Mus musculus (house mouse) : Cyc1 (cytochrome c-1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : LOC102023109 (cytochrome c1, heme protein, mitochondrial)
Pan paniscus (bonobo/pygmy chimpanzee) : LOC100995886 (cytochrome c1, heme protein, mitochondrial)
Canis lupus familiaris (dog) : CYC1 (cytochrome c1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : LOC101954680 (cytochrome c1, heme protein, mitochondrial)
Sus scrofa (pig) : LOC100525869 (cytochrome c1, heme protein, mitochondrial)
more info ...
Related Pseudogenes: Cyc1-ps1  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07117,409,576 - 117,411,953 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7117,409,576 - 117,411,953 (+)Ensembl
Rnor_5.07117,397,206 - 117,399,583 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47114,394,178 - 114,396,563 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.17114,428,409 - 114,430,788 (+)NCBI
Celera7104,419,433 - 104,421,810 (+)NCBICelera
Cytogenetic Map7q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Cyc1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1306597
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.