Bop1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 7 | 110,052,716 - 110,076,529 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 7 | 108,172,062 - 108,195,875 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 7 | 108,172,066 - 108,195,931 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 7 | 109,916,459 - 109,940,262 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 7 | 112,140,156 - 112,163,959 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 7 | 112,098,544 - 112,122,309 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 7 | 117,514,529 - 117,538,342 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 7 | 117,514,533 - 117,538,342 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 7 | 117,502,160 - 117,525,973 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 7 | 114,500,155 - 114,524,030 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 7 | 114,534,386 - 114,558,260 (-) | NCBI | | | | | Celera | 7 | 104,523,713 - 104,547,502 (-) | NCBI | | Celera | | | Cytogenetic Map | 7 | q34 | NCBI | | | | |
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BOP1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 8 | 144,262,045 - 144,291,438 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 8 | 144,262,045 - 144,291,438 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 8 | 145,316,948 - 145,331,185 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 8 | 145,456,864 - 145,485,928 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 8 | 145,456,863 - 145,485,928 | NCBI | | | | | Celera | 8 | 141,660,871 - 141,689,893 (-) | NCBI | | Celera | | | Cytogenetic Map | 8 | q24.3 | NCBI | | | | | HuRef | 8 | 140,600,632 - 140,629,634 (-) | NCBI | | HuRef | | | CHM1_1 | 8 | 145,538,487 - 145,553,302 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 8 | 145,430,815 - 145,459,890 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Bop1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 15 | 76,337,188 - 76,361,449 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 15 | 76,337,189 - 76,361,477 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 15 | 76,452,988 - 76,477,249 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 15 | 76,452,989 - 76,477,277 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 15 | 76,283,426 - 76,307,699 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 15 | 76,280,251 - 76,304,524 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 15 | 77,953,429 - 77,977,780 (-) | NCBI | | Celera | | | Cytogenetic Map | 15 | D3 | NCBI | | | | | cM Map | 15 | 35.91 | NCBI | | | | |
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Bop1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955454 | 2,882,755 - 2,907,081 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955454 | 2,882,694 - 2,907,177 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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BOP1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 7 | 161,747,719 - 161,778,596 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 8 | 137,277,841 - 137,308,511 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 8 | 141,024,518 - 141,055,173 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 8 | 144,015,518 - 144,043,278 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 8 | 144,015,601 - 144,043,280 (-) | Ensembl | panpan1.1 | | panPan2 | |
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BOP1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 13 | 37,698,635 - 37,723,803 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 13 | 37,698,698 - 37,724,457 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 13 | 37,662,427 - 37,688,100 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 13 | 38,174,993 - 38,200,746 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 13 | 38,174,997 - 38,199,877 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 13 | 37,847,179 - 37,871,825 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 13 | 37,975,815 - 38,001,527 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 13 | 38,452,110 - 38,477,850 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Bop1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405303 | 524,835 - 551,088 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936470 | 7,950,982 - 7,977,540 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936470 | 7,950,952 - 7,977,186 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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BOP1 (Sus scrofa - pig) |
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BOP1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 8 | 138,473,377 - 138,503,715 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 8 | 138,473,441 - 138,503,661 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666039 | 1,360,979 - 1,392,558 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Bop1 (Heterocephalus glaber - naked mole-rat) |
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