Gene: Trps1 (transcriptional repressor GATA binding 1) Rattus norvegicus
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Symbol: Trps1
Name: transcriptional repressor GATA binding 1
Description: ENCODES a protein that exhibits protein domain specific binding (ortholog); RNA polymerase II regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN chondrocyte differentiation (ortholog); hair follicle development (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH alopecia areata (ortholog); Animal Mammary Neoplasms (ortholog); bone development disease (ortholog); FOUND IN nuclear chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; all-trans-retinoic acid; bis(2-ethylhexyl) phthalate
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC299897; trichorhinophalangeal syndrome I; trichorhinophalangeal syndrome I (human); trichorhinophalangeal syndrome I homolog; trichorhinophalangeal syndrome I homolog (human); zinc finger transcription factor Trps1
Orthologs:
Homo sapiens (human) : TRPS1 (transcriptional repressor GATA binding 1)  HGNC  Alliance
Mus musculus (house mouse) : Trps1 (transcriptional repressor GATA binding 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Trps1 (transcriptional repressor GATA binding 1)
Pan paniscus (bonobo/pygmy chimpanzee) : TRPS1 (transcriptional repressor GATA binding 1)
Canis lupus familiaris (dog) : TRPS1 (transcriptional repressor GATA binding 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Trps1 (transcriptional repressor GATA binding 1)
Sus scrofa (pig) : TRPS1 (transcriptional repressor GATA binding 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0790,085,895 - 90,320,430 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0790,113,508 - 90,343,325 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4786,855,378 - 87,076,668 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1786,876,430 - 87,097,949 (-)NCBI
Celera778,810,727 - 79,029,498 (-)NCBICelera
Cytogenetic Map7q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Trps1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311883
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-02-05
Status: ACTIVE