PMC313795P1 Marker Search Result - Rat Genome Database

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Marker: PMC313795P1

Symbol: PMC313795P1
Previously known as:
RGD ID: 5504606
Expected Size: 345 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.27108,389,162 - 108,389,507 (+)MAPPERmRatBN7.2
Rnor_6.07117,731,501 - 117,731,845NCBIRnor6.0
Rnor_5.07117,719,584 - 117,719,928UniSTSRnor5.0
RGSC_v3.47114,718,577 - 114,718,921UniSTSRGSC3.4
Celera7104,739,066 - 104,739,410UniSTS
Cytogenetic Map7q34UniSTS
Is Marker For: Genes:   Foxh1  




#
Reference Title
Reference Citation
1. UniSTS Pipeline RGD automated pipelines


 
Forward Primer ATCCGTCAGGTCCAGGCAGTG
Reverse Primer CTTGGCGAAAGCTCTGTG
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1311275Foxh1forkhead box H17108387969108391566Rat
RefSeq Transcripts NM_001130493 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide BC158731 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 35 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1300179Kidm5Kidney mass QTL 53.51kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)743747012135012528Rat
1331728Bp214Blood pressure QTL 2142.825arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)780221299124373579Rat
1331731Bp216Blood pressure QTL 2162.851arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)7102297359133492884Rat
2298475Eau6Experimental allergic uveoretinitis QTL 60.0029uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)784257275129257275Rat
71114Niddm14Non-insulin dependent diabetes mellitus QTL 144.5blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)784257275129257275Rat
1357336Gluco6Glucose level QTL 63.4blood glucose amount (VT:0000188)serum glucose level (CMO:0000543)794811326116294265Rat
1358361Sradr5Stress Responsive Adrenal Weight QTL 55.55adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)743747012108555253Rat
1357338Stl17Serum triglyceride level QTL 173.23blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)769736356112729554Rat
631687Hcas1Hepatocarcinoma susceptibility QTL 13.90.001liver integrity trait (VT:0010547)liver tumorous lesion volume to total liver volume ratio (CMO:0001082)791412594129807172Rat
70159Bp61Blood pressure QTL 610.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)7103146217116738842Rat

1 to 10 of 35 rows


Database
Acc Id
Source(s)
NCBI Gene 300054 UniSTS