Bmd79 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Bmd79 (Bone mineral density QTL 79) Rattus norvegicus

Symbol: Bmd79
Name: Bone mineral density QTL 79
RGD ID: 2313102
Previously known as: Pqctf7
Trait: tibia mineral mass   (VT:1000283)    
Measurement Type: total volumetric bone mineral density   (CMO:0001728)    
LOD Score: 2.3
P Value: 1.0E-4
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2794,811,085 - 116,738,842RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.07103,815,550 - 126,525,386RGD_MAPPER_PIPELINERnor6.0
Rnor_5.07104,385,465 - 126,236,887RGDRnor5.0
RGSC_v3.47100,273,558 - 123,635,849RGDRGSC3.4
Cross Type: intercross
Strains Crossed: GK/KyoSwe F344/DuCrlSwe 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
osteoporosis  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Vertebrate Trait

Rat Strain
F344/DuCrlSwe  (IEA)
GK/KyoSwe  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Genetic regulation of bone traits is influenced by sex and reciprocal cross in F(2) progeny from GK and F344 rats. Lagerholm S, etal., J Bone Miner Res. 2009 Jun;24(6):1066-74.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
7719983LOC102548624uncharacterized LOC10254862479520888895230371Rat
1587369Idh3b-ps1isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta, pseudogene 179530124495302379Rat
9115372LOC103692910glyceraldehyde-3-phosphate dehydrogenase pseudogene79545070495451612Rat
1308989Gsdmcgasdermin C79559401595606106Rat
1359449Gsdmdl1gasdermin D like 179562005295630546Rat
1307697CyribCYFIP related Rac1 interactor B79563387695760588Rat
41339457LOC120093676uncharacterized LOC12009367679569740995701254Rat
1307379Asap1ArfGAP with SH3 domain, ankyrin repeat and PH domain 179578613096093111Rat
2036Adcy8adenylate cyclase 879641731096665911Rat
1598175Psmb3l3proteasome 20S subunit beta 3 like 379670657996707280Rat
41390682LOC120093969small nucleolar RNA SNORA4879682511896825259Rat
1594487Hspa8-ps9heat shock protein family A (Hsp70) member 8, pseudogene 979690175996904484Rat
41211077LOC120093679uncharacterized LOC12009367979714556297197618Rat
1305976Efr3aEFR3 homolog A79755267797633369Rat
1593441Oc90otoconin 9079763589097669303Rat
15008789Hhla1HHLA1 neighbor of OC9079767094697711308Rat
69222Kcnq3potassium voltage-gated channel subfamily Q member 379773021998025652Rat
11444634Trnak-cuu10transfer RNA lysine (anticodon CUU) 1079805030898050380Rat
1559937Dnaaf11dynein axonemal assembly factor 1179814152598245906Rat
41066261Rabggta-ps2Rab geranylgeranyltransferase subunit alpha, pseudogene 279824576698274427Rat
1593414Tmem71transmembrane protein 7179827697598323161Rat
1560141Phf20l1PHD finger protein 20-like 179833058098396526Rat
41336226LOC120094027U2 spliceosomal RNA79839917098399344Rat
3848Tgthyroglobulin79841829398603210Rat
631373Slasrc-like adaptor79853443198584810Rat
69431Ccn4cellular communication network factor 479864523898677253Rat
1307303Ndrg1N-myc downstream regulated 179868448798725869Rat
7632859LOC102550354uncharacterized LOC10255035479879959198823018Rat
1309373St3gal1ST3 beta-galactoside alpha-2,3-sialyltransferase 179884527098913409Rat
7563506LOC102555324MLV-related proviral Env polyprotein-like79920971699211726Rat
7607396LOC102550565uncharacterized LOC10255056579925710499287329Rat
1592251Hypk-ps1huntingtin interacting protein K, pseudogene 179941289599413276Rat
1594370Nop2-ps3NOP2 nucleolar protein, pseudogene 379944663599449266Rat
1310886Zfatzinc finger and AT hook domain containing799886954100054288Rat
40928179LOC120093680uncharacterized LOC1200936807100100814100116285Rat
7751266LOC102551574uncharacterized LOC1025515747100102553100159947Rat
2325392Mir30bmicroRNA 30b7100132589100132675Rat
2325589Mir30dmicroRNA 30d7100136391100136472Rat
1564548H3-7lH3.7 histone like7100253160100257870Rat
41069368Calm1-ps1calmodulin 1, pseudogene 17100467800100468244Rat
41057908Tox4-ps1TOX high mobility group box family member 4, pseudogene 17100628756100635603Rat
620921Khdrbs3KH RNA binding domain containing, signal transduction associated 37100837707100995644Rat
11479082LOC108351507uncharacterized LOC1083515077100977899100982865Rat
1585982R3hdm2-ps2R3H domain containing 2, pseudogene 27101184273101187188Rat
41311854LOC120094008small nucleolar RNA SNORA177101325223101325349Rat
41089210LOC120093934U7 small nuclear RNA7101328875101328934Rat
41147028LOC120093935U7 small nuclear RNA7102247197102247258Rat
1562153Rps19l1ribosomal protein S19-like 17102435651102436279Rat
2324751Fcf1-ps3Fcf1 rRNA-processing protein, pseudogene 37103065074103065683Rat
11406708Trnap-agg8transfer RNA proline (anticodon AGG) 87103365474103365547Rat
1308133Fam135bfamily with sequence similarity 135, member B7103380981103649802Rat
41389968Trnav-aac32transfer RNA valine (anticodon AAC) 327103459299103459371Rat
41028520Hmgn4-ps2high mobility group nucleosomal binding domain 4, pseudogene 27103596895103602401Rat
1309081Col22a1collagen type XXII alpha 1 chain7103730939103968452Rat
11486846LOC108351508uncharacterized LOC1083515087103732592103735810Rat
40931729LOC120094038small nucleolar RNA U37104110727104110918Rat
621451Kcnk9potassium two pore domain channel subfamily K member 97104429186104473924Rat
1309461Trappc9trafficking protein particle complex subunit 97104521593104998352Rat
40972395LOC120093940U7 small nuclear RNA7104652170104652234Rat
1309321Chrac1chromatin accessibility complex subunit 17105013047105016435Rat
621255Ago2argonaute RISC catalytic component 27105018202105105118Rat
3443Ptk2protein tyrosine kinase 27105126725105331848Rat
2325400Mir151microRNA 1517105172377105172473Rat
4888536Mir151bmicroRNA 151b7105172377105172496Rat
40981668LOC120093952small nucleolar RNA SNORA87105272233105272369Rat
1564268Rpl36l1ribosomal protein L36 like 17105381415105381903Rat
1311559Dennd3DENN domain containing 37105415870105473583Rat
1309971Slc45a4solute carrier family 45, member 47105478886105550160Rat
620034Gpr20G protein-coupled receptor 207105601761105611959Rat
40948151LOC120094044U4 spliceosomal RNA7105633514105633676Rat
1308687Ptp4a3protein tyrosine phosphatase 4A37105650640105660921Rat
1559695Mroh5maestro heat-like repeat family member 57105662737105737820Rat
1562139Rpl29l5ribosomal protein L29 like 57105805032105805521Rat
9421138Tsnare1t-SNARE domain containing 17106226056106407308Rat
1305608Adgrb1adhesion G protein-coupled receptor B17106404827106476902Rat
7630205LOC102550505uncharacterized LOC1025505057106476905106480701Rat
7728252LOC102550355uncharacterized LOC1025503557106479468106511009Rat
1311993Mroh4maestro heat-like repeat family member 47106491305106535473Rat
41134950LOC120093909U6 spliceosomal RNA7106541474106541580Rat
62037Arcactivity-regulated cytoskeleton-associated protein7106555968106559697Rat
1306316JrkJrk helix-turn-helix protein7106590662106595345Rat
1594221Pscaprostate stem cell antigen7106598203106603114Rat
1359378Them6thioesterase superfamily member 67106606570106609747Rat
1308768Slurp1secreted Ly6/Plaur domain containing 17106611949106613365Rat
1307892Lypd2Ly6/Plaur domain containing 27106617561106619598Rat
1308195Slurp2secreted Ly6/Plaur domain containing 27106627775106631655Rat
1312017Lynx1Ly6/neurotoxin 17106632800106638003Rat
1306132Ly6dlymphocyte antigen 6 family member D7106643225106644733Rat
41027941LOC120093891lymphocyte antigen 6D-like7106653721106661132Rat
1307850Gmlglycosylphosphatidylinositol anchored molecule like7106683749106712802Rat
2322953Ly6klymphocyte antigen 6 family member K7106683749106712802Rat
1593012Cyp11b1-ps1cytochrome P450, family 11, subfamily b, polypeptide 1, pseudogene 17106718410106724483Rat
41382688Cyp11b2l1cytochrome P450, family 11, subfamily b, polypeptide 2 like 17106724638106751822Rat
2453Cyp11b1cytochrome P450, family 11, subfamily b, polypeptide 17106772597106780536Rat
727886Cyp11b3cytochrome P450, family 11, subfamily b, polypeptide 37106808559106814048Rat
40929868Timm8a1-ps2translocase of inner mitochondrial membrane 8A1, pseudogene 27106815172106815466Rat
2454Cyp11b2cytochrome P450, family 11, subfamily b, polypeptide 27106838590106845004Rat
2324576Ly6mlymphocyte antigen 6 family member M7106863167106867047Rat
1565342Ly6elymphocyte antigen 6 family member E7106935530106939689Rat
621266Ly6cLy6-C antigen7106959508106963329Rat
1586182Ly6al1lymphocyte antigen 6 complex, locus A like 17107011585107018125Rat
628818Ly6ilymphocyte antigen 6 complex, locus I7107062320107067743Rat
11419888LOC108351510uncharacterized LOC1083515107107069127107107867Rat
1565410Ly6cl1Ly6-C antigen like 17107122197107163755Rat
40992931LOC120093684lymphocyte antigen 6L-like7107141473107147521Rat
1307571Ly6alymphocyte antigen 6 family member A7107177191107189436Rat
1597652Ly6llymphocyte antigen 6 family member L7107220612107222692Rat
1311896Ly6hlymphocyte antigen 6 family member H7107258779107261270Rat
1564237Gpihbp1glycosylphosphatidylinositol anchored high density lipoprotein binding protein 17107285584107288702Rat
1307587Zfp41zinc finger protein 417107307303107320164Rat
1560906Gli4GLI family zinc finger 47107325584107330911Rat
1303177Top1mtDNA topoisomerase I mitochondrial7107338092107368125Rat
1305688Rhpn1rhophilin, Rho GTPase binding protein 17107391948107402713Rat
41247952LOC120093904U6 spliceosomal RNA7107423495107423601Rat
1562627MafaMAF bZIP transcription factor A7107432292107435084Rat
1307276Zc3h3zinc finger CCCH type containing 37107440694107525451Rat
41268187LOC120093992small nucleolar RNA SNORA177107446145107446279Rat
1307261Gsdmdgasdermin D7107542489107547051Rat
2323632Mroh6maestro heat-like repeat family member 67107566212107576469Rat
1302945Naprtnicotinate phosphoribosyltransferase7107576645107580102Rat
621174Eef1deukaryotic translation elongation factor 1 delta7107581930107596735Rat
1311576Tigd5tigger transposable element derived 57107596724107599243Rat
1309115Pycr3pyrroline-5-carboxylate reductase 37107603543107608831Rat
1307028GfusGDP-L-fucose synthase7107612087107617005Rat
7635192Zfp623zinc finger protein 6237107627334107636254Rat
41044122LOC120093815uncharacterized LOC1200938157107641619107650169Rat
1562665Zfp707l1zinc finger protein 707-like 17107650517107661335Rat
1311188Zfp707zinc finger protein 7077107679597107686556Rat
1588167Ccdc166coiled-coil domain containing 1667107693572107695375Rat
628675Mapk15mitogen-activated protein kinase 157107694907107714640Rat
1305866Fam83hfamily with sequence similarity 83, member H7107716431107724619Rat
1563870Iqank1IQ motif and ankyrin repeat containing 17107724962107759163Rat
1565055Scribscribble planar cell polarity protein7107759343107782364Rat
7653288LOC102548315uncharacterized LOC1025483157107782568107789583Rat
621674Puf60poly-U binding splicing factor 607107782799107793759Rat
1591749Nrbp2nuclear receptor binding protein 27107798642107805225Rat
1587023Eppk1epiplakin 17107816919107842946Rat
1587008Dstl1dystonin like 17107838089107847304Rat
7634850LOC102548374uncharacterized LOC1025483747107854542107871168Rat
621649Plecplectin7107887764107949100Rat
7744876Parp10poly (ADP-ribose) polymerase family, member 107107949031107958377Rat
628873Grinaglutamate ionotropic receptor NMDA type subunit associated protein 17107962194107965372Rat
41312805LOC120093816uncharacterized LOC1200938167107974652107982766Rat
1565316Spatc1spermatogenesis and centriole associated 17107980857108007716Rat
40991677Trnal-aag12transfer RNA leucine (anticodon AAG) 127108005044108005124Rat
2323312Smpd5sphingomyelin phosphodiesterase 57108009182108011767Rat
620956Oplah5-oxoprolinase (ATP-hydrolysing)7108011472108051751Rat
1310986Exosc4exosome component 47108047831108050573Rat
1303197Gpaa1glycosylphosphatidylinositol anchor attachment 17108051896108055479Rat
1306597Cyc1cytochrome c-17108067106108069483Rat
631353SharpinSHANK-associated RH domain interactor7108070681108075012Rat
1359315Maf1MAF1 homolog, negative regulator of RNA polymerase III7108075173108078252Rat
1562063Wdr97WD repeat domain 977108078280108087028Rat
1359226Hgh1HGH1 homolog7108091918108094740Rat
1308613Tssk5testis-specific serine kinase 57108094836108102557Rat
1642414Mroh1maestro heat-like repeat family member 17108098708108172146Rat
41036871LOC120093924U6 spliceosomal RNA7108137837108137943Rat
1310589Bop1BOP1 ribosomal biogenesis factor7108172062108195875Rat
1588254Scxscleraxis bHLH transcription factor7108176608108178626Rat
620913Hsf1heat shock transcription factor 17108196040108223011Rat
628673Dgat1diacylglycerol O-acyltransferase 17108223860108235413Rat
1306236Scrt1scratch family transcriptional repressor 17108240986108244636Rat
1560410Slc52a2solute carrier family 52 member 27108246003108267642Rat
41317711Trnap-agg52transfer RNA proline (anticodon AGG) 527108251403108251483Rat
6496784Tmem249transmembrane protein 2497108256535108259429Rat
1359687Fbxl6F-box and leucine-rich repeat protein 67108259097108262528Rat
1305504Adck5aarF domain containing kinase 57108301623108319439Rat
1306406Cpsf1cleavage and polyadenylation specific factor 17108319429108330018Rat
1306701Slc39a4solute carrier family 39 member 47108333368108337553Rat
1306537Vps28VPS28 subunit of ESCRT-I7108341989108345837Rat
1307483Tonsltonsoku-like, DNA repair protein7108345704108360792Rat
11425062Zftraf1zinc finger TRAF type containing 17108363989108377428Rat
152995352Tmem276-zftraf1Tmem276-zftraf1 readthrough7108363989108380435Rat
2318728Tmem276Transmembrane protein 2767108378569108380453Rat
735021Kifc2kinesin family member C27108380634108388364Rat
1311275Foxh1forkhead box H17108387969108391566Rat
1307962Ppp1r16aprotein phosphatase 1, regulatory subunit 16A7108391664108414812Rat
621720Gptglutamic--pyruvic transaminase7108416646108419495Rat
1560274Mfsd3major facilitator superfamily domain containing 37108419644108423469Rat
1307732Recql4RecQ like helicase 47108423453108430790Rat
1560202Lrrc14leucine rich repeat containing 147108430755108437118Rat
1308720Lrrc24leucine rich repeat containing 247108437296108444561Rat
1359663C7h8orf82similar to human chromosome 8 open reading frame 827108443772108446116Rat
1593158Arhgap39Rho GTPase activating protein 397108446280108538875Rat
1311138Zfp251zinc finger protein 2517108568564108598593Rat
1310636Zfp7zinc finger protein 77108598666108615740Rat
41212471LOC120093953U1 spliceosomal RNA7108600658108600820Rat
621468Commd5COMM domain containing 57108621766108623616Rat
619827Rpl8ribosomal protein L87108626194108628485Rat
1308203Zfp647zinc finger protein 6477108632248108649264Rat
7613843Znf16l-ps1Zinc finger protein 16 like, pseudogene 17108650889108670242Rat
1597990C7h8orf33similar to human chromosome 8 open reading frame 337108682122108684372Rat
620411Mbmyoglobin7108759903108767134Rat
1311838Rbfox2RNA binding fox-1 homolog 27108810627109054420Rat
41017484LOC120093818uncharacterized LOC1200938187109107379109114380Rat
11460844Apol7al1apolipoprotein L7a like 17109118559109149798Rat
401950492Apol9a-Apol7aApol9a-Apol7a readthrough7109118559109149798Rat
1562332Apol9aapolipoprotein L9a7109140871109149799Rat
1565356Apol7b-ps1apolipoprotein L7b, pseudogene 17109156746109175642Rat
41279919LOC120093819apolipoprotein L3-like7109179086109187091Rat
41340728LOC120093820uncharacterized LOC1200938207109211976109215812Rat
2318353Pole3-ps3DNA polymerase epsilon 3, accessory subunit, pseudogene 37109236108109236813Rat
1309798Apol11aapolipoprotein L11a7109248260109262266Rat
7747383LOC102552424uncharacterized LOC1025524247109264051109268818Rat
1306480Apol3l1apolipoprotein L3 like 17109288725109297728Rat
1309808Apol7bl1apolipoprotein L7b like 17109304895109322867Rat
1309591Apol2apolipoprotein L27109331367109338632Rat
3140Myh9myosin, heavy chain 97109343718109424457Rat
41249524LOC120093913U6 spliceosomal RNA7109422947109423048Rat
7537516LOC102553569uncharacterized LOC1025535697109426036109431271Rat
7560585LOC102553868uncharacterized LOC1025538687109471837109508582Rat
41345827LOC120094023small nucleolar RNA U1097109475385109475522Rat
71040Txn2thioredoxin 27109496772109510378Rat
1306763Foxred2FAD-dependent oxidoreductase domain containing 27109521761109538300Rat
1303255Eif3deukaryotic translation initiation factor 3, subunit D7109539795109552184Rat
7560614LOC102553765uncharacterized LOC1025537657109552295109560604Rat
71095Cacng2calcium voltage-gated channel auxiliary subunit gamma 27109572838109698516Rat
7639901LOC102554213uncharacterized LOC1025542137109698588109722294Rat
1308703Ift27intraflagellar transport 277109738622109754416Rat
3457Pvalbparvalbumin7109772939109787954Rat
1593157Ncf4neutrophil cytosolic factor 47109825420109843389Rat
620189Csf2rbcolony stimulating factor 2 receptor subunit beta7109876919109901589Rat
1592508Cimip4ciliary microtubule inner protein 47109928165109944994Rat
41392094LOC120093821uncharacterized LOC1200938217109945061109946931Rat
3913Tstthiosulfate sulfurtransferase7109948061109955378Rat
620065Mpstmercaptopyruvate sulfurtransferase7109955581109963155Rat
41341494LOC120093822uncharacterized LOC1200938227109971471109976020Rat
1311154Kctd17potassium channel tetramerization domain containing 177109979060110009091Rat
1307138Tmprss6transmembrane serine protease 67109991008110021626Rat
2896Il2rbinterleukin 2 receptor subunit beta7110033341110048054Rat
41173109LOC120093823uncharacterized LOC1200938237110034832110045180Rat
1307057C1qtnf6C1q and TNF related 67110077867110084584Rat
41068402LOC120093686uncharacterized LOC1200936867110085079110087862Rat
620308Sstr3somatostatin receptor 37110092563110109043Rat
1307568Rac2Rac family small GTPase 27110101344110128718Rat
9253647LOC103692944uncharacterized LOC1036929447110108923110111987Rat
1564842Cyth4cytohesin 47110152232110176726Rat
1559693Elfn2extracellular leucine-rich repeat and fibronectin type III domain containing 27110220293110272770Rat
7747746LOC102549375uncharacterized LOC1025493757110225335110229974Rat
735126MfngMFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase7110310810110328653Rat
1304949Card10caspase recruitment domain family, member 107110330460110371551Rat
1311131Cdc42ep1CDC42 effector protein 17110395287110403203Rat
621269Lgals2galectin 27110403171110410046Rat
1307770Gga1golgi associated, gamma adaptin ear containing, ARF binding protein 17110436071110451790Rat
41213034LOC120093687uncharacterized LOC1200936877110443149110457619Rat
1306275Sh3bp1SH3-domain binding protein 17110457626110470201Rat
1586212Pdxppyridoxal phosphatase7110472515110477963Rat
69355Lgals1galectin 17110485239110488345Rat
1305327Nol12nucleolar protein 127110493294110498908Rat
1308485TriobpTRIO and F-actin binding protein7110505916110569301Rat
2777H1f0H1.0 linker histone7110592834110594694Rat
1307291Gcatglycine C-acetyltransferase7110595126110601474Rat
2658Galr3galanin receptor 37110603525110608429Rat
1309552Ankrd54ankyrin repeat domain 547110614942110627739Rat
41349869Trnav-aac17transfer RNA valine (anticodon AAC) 177110640985110641059Rat
1308230Eif3leukaryotic translation initiation factor 3, subunit L7110652565110663614Rat
1305415Micall1MICAL-like 17110676706110707171Rat
1359634C7h22orf23similar to human chromosome 22 open reading frame 237110704894110712485Rat
708567Polr2fRNA polymerase II, I and III subunit F7110712528110724234Rat
3735Sox10SRY-box transcription factor 107110725274110734651Rat
41375997LOC120093688uncharacterized LOC1200936887110736181110790539Rat
69437Pick1protein interacting with PRKCA 17110796623110816850Rat
69282Slc16a8solute carrier family 16 member 87110818274110822069Rat
1595091Baiap2l2BAR/IMD domain containing adaptor protein 2 like 27110824370110850702Rat
628867Pla2g6phospholipase A2 group VI7110851378110891557Rat
1309531MaffMAF bZIP transcription factor F7110912367110923711Rat
1306591Tmem184btransmembrane protein 184B7110925092110967975Rat
62045Csnk1ecasein kinase 1, epsilon7110983322111006926Rat
621436Kcnj4potassium inwardly-rectifying channel, subfamily J, member 47111047097111074151Rat
1311536Kdelr3KDEL endoplasmic reticulum protein retention receptor 37111079236111089463Rat
1304945Ddx17DEAD-box helicase 177111091127111109353Rat
1307611Dmc1DNA meiotic recombinase 17111124888111167465Rat
1305939Fam227afamily with sequence similarity 227, member A7111174362111216513Rat
708481Cby1chibby 1, beta catenin antagonist7111216835111223305Rat
1303260Tomm22translocase of outer mitochondrial membrane 227111223508111228671Rat
1305388Josd1Josephin domain containing 17111230318111244241Rat
1306758Gtpbp1GTP binding protein 17111248254111272705Rat
1563141Sun2Sad1 and UNC84 domain containing 27111275374111292565Rat
1309099Dnal4dynein, axonemal, light chain 47111312424111325283Rat
628898Nptxrneuronal pentraxin receptor7111336660111354737Rat
1307314Cbx6chromobox 67111372979111383026Rat
41395081LOC120093691uncharacterized LOC1200936917111383224111385984Rat
7637000LOC102547313uncharacterized LOC1025473137111388439111414810Rat
7717188LOC102547383uncharacterized LOC1025473837111423537111436468Rat
41030959LOC120093920U6 spliceosomal RNA7111428754111428817Rat
1307800Apobec3apolipoprotein B mRNA editing enzyme catalytic subunit 37111433789111453032Rat
735027Cbx7chromobox 77111460656111479231Rat
41306094LOC120093692uncharacterized LOC1200936927111463567111467633Rat
41302847LOC120094022small nucleolar RNA U1097111527342111527476Rat
3283Pdgfbplatelet derived growth factor subunit B7111539444111557984Rat
41084078LOC120093929U7 small nuclear RNA7111594864111594927Rat
735105Rpl3ribosomal protein L37111622255111627640Rat
40986000Snord83bsmall nucleolar RNA, C/D box 83B7111622885111622978Rat
41314212LOC120094021small nucleolar RNA U82P7111625088111625142Rat
41020681Snord43small nucleolar RNA, C/D box 437111627136111627199Rat
3801Syngr1synaptogyrin 17111635911111659341Rat
9259035Ube2s-ps3ubiquitin-conjugating enzyme E2S, pseudogene 37111667220111668085Rat
1306216Tab1TGF-beta activated kinase 1/MAP3K7 binding protein 17111675829111707058Rat
3084Mgat3beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase7111708353111761825Rat
1359173Mief1mitochondrial elongation factor 17111786630111802220Rat
621863Atf4activating transcription factor 47111804135111806457Rat
1562823Rps19bp1ribosomal protein S19 binding protein 17111809354111812741Rat
68944Cacna1icalcium voltage-gated channel subunit alpha1 I7111835996111947418Rat
1587874Enthd1ENTH domain containing 17111994775112109246Rat
41314578LOC120093994small nucleolar RNA SNORA177112000881112001015Rat
7499841Banf1-ps5BAF nuclear assembly factor 1, pseudogene 57112070981112072251Rat
7501927Rpl22l1-ps3ribosomal protein L22 like 1, pseudogene 37112099039112099740Rat
1307605Grap2GRB2-related adaptor protein 27112117142112190880Rat
1562089Fam83ffamily with sequence similarity 83, member F7112211164112240454Rat
621428Tnrc6btrinucleotide repeat containing adaptor 6B7112252351112469829Rat
1590264Rpl26-ps1ribosomal protein L26, pseudogene 17112264114112264619Rat
1590254Rpl29-ps1ribosomal protein L29, pseudogene 17112324020112324633Rat
41125667LOC120093695uncharacterized LOC1200936957112338247112343330Rat
1307617Adsladenylosuccinate lyase7112479256112503439Rat
2323713Srek1ip1-ps1SREK1-interacting protein 1, pseudogene 17112482208112484640Rat
735113Sgsm3small G protein signaling modulator 37112514453112544109Rat
1304873Mrtfamyocardin related transcription factor A7112544305112714418Rat
2321025Tmsb10-ps6thymosin, beta 10, pseudogene 67112743871112744335Rat
619841Mchr1melanin-concentrating hormone receptor 17112761554112764746Rat
41314877Trnas-aga50transfer RNA serine (anticodon AGA) 507112821076112821156Rat
41158614LOC120093696uncharacterized LOC1200936967112828249112849186Rat
1311498Slc25a17solute carrier family 25 member 177112844375112887014Rat
621312St13ST13, Hsp70 interacting protein7112891007112925727Rat
1589063Xpnpep3X-prolyl aminopeptidase 37112926154112978793Rat
1589047Dnajb7DnaJ heat shock protein family (Hsp40) member B77112932736112934050Rat
1308453Rbx1ring-box 17112976863113001051Rat
1586668Rpl37a-ps2ribosomal protein L37A, pseudogene 27112980952112981326Rat
41046357Trnap-agg43transfer RNA proline (anticodon AGG) 437112986973112987046Rat
41072219LOC120093697uncharacterized LOC1200936977113066608113104774Rat
620036Ep300E1A binding protein p3007113108476113178529Rat
41098964LOC120093921U6 spliceosomal RNA7113113865113113969Rat
11405140Rps35al1ribosomal protein L35A like 17113132632113133074Rat
1308569L3mbtl2L3MBTL histone methyl-lysine binding protein 27113186303113209706Rat
6504353Chadlchondroadherin-like7113205323113218678Rat
41261889LOC120093698uncharacterized LOC1200936987113218865113221648Rat
1310380Rangap1RAN GTPase activating protein 17113224695113250441Rat
1307064Zc3h7bzinc finger CCCH-type containing 7B7113262142113310399Rat
3841TefTEF transcription factor, PAR bZIP family member7113317191113341783Rat
1359722Tob2transducer of ERBB2, 27113362703113371423Rat
621555Phf5aPHD finger protein 5A7113378469113385035Rat
621360Aco2aconitase 27113385677113428794Rat
1305889Polr3hRNA polymerase III subunit H7113429434113439743Rat
7624935Nup160l1nucleoporin 160 like 17113445592113453936Rat
40959951LOC120093958small nucleolar RNA SNORA447113445963113446091Rat
628780Csdc2cold shock domain containing C27113451998113466464Rat
1310897Pmm1phosphomannomutase 17113466632113477004Rat
1306782Ndufb11bNADH:ubiquinone oxidoreductase subunit B11B7113505048113506359Rat
9267311LOC103692950uncharacterized LOC1036929507113513047113519562Rat
1305776Desi1desumoylating isopeptidase 17113519974113542834Rat
2643Xrcc6X-ray repair cross complementing 67113542992113563762Rat
1303103Snu13small nuclear ribonucleoprotein 137113565293113570887Rat
2318773LOC100362109hypothetical protein LOC1003621097113578871113586264Rat
1307210Mei1meiotic double-stranded break formation protein 17113590142113643513Rat
1559657Ccdc134coiled-coil domain containing 1347113644557113659050Rat
1307751Srebf2sterol regulatory element binding transcription factor 27113663202113720850Rat
2325408Mir33microRNA 337113713855113713923Rat
1563996Shisa8shisa family member 87113722408113727858Rat
1560810Tnfrsf13cTNF receptor superfamily member 13C7113736046113738523Rat
1307309Cenpmcentromere protein M7113748026113759296Rat
1586487Smim45small integral membrane protein 457113769175113773952Rat
11358773LOC108351520uncharacterized LOC1083515207113777756113789180Rat
621745Septin3septin 37113783217113811089Rat
1586458Wbp2nlWBP2 N-terminal like7113814793113831974Rat
1306025Nagaalpha-N-acetylgalactosaminidase7113846358113855430Rat
1586415Pheta2PH domain containing endocytic trafficking adaptor 27113855437113861910Rat
1311310Smdt1single-pass membrane protein with aspartate-rich tail 17113862162113865245Rat
1309818Ndufa6NADH:ubiquinone oxidoreductase subunit A67113866382113870239Rat
620640Cyp2d4cytochrome P450, family 2, subfamily d, polypeptide 47113882584113891754Rat
9315147LOC103692951uncharacterized LOC1036929517113891637113897875Rat
628630Cyp2d5cytochrome P450, family 2, subfamily d, polypeptide 57113899905113904458Rat
708427Cyp2d1cytochrome P450, family 2, subfamily d, polypeptide 17113908950113913420Rat
2472Cyp2d3cytochrome P450, family 2, subfamily d, polypeptide 37113917711113922068Rat
2471Cyp2d2cytochrome P450, family 2, subfamily d, polypeptide 27113935138113939209Rat
1594486Tcf20transcription factor 207113953449114104166Rat
1308316Nfam1NFAT activating protein with ITAM motif 17114139318114175395Rat
9413653LOC103692952uncharacterized LOC1036929527114219940114225977Rat
1563386Serhl2serine hydrolase-like 27114246035114266298Rat
1311547Rrp7aribosomal RNA processing 7 homolog A7114262929114272817Rat
1311073Poldip3DNA polymerase delta interacting protein 37114274845114303278Rat
40957660Rnu12RNA, U12 small nuclear7114303546114303696Rat
40984839Trnap-agg38transfer RNA proline (anticodon AGG) 387114303927114304008Rat
2502Cyb5r3cytochrome b5 reductase 37114306686114324247Rat
621583A4galtalpha 1,4-galactosyltransferase7114368525114392872Rat
1560066Arfgap3ARF GTPase activating protein 37114432873114479206Rat
69411Pacsin2protein kinase C and casein kinase substrate in neurons 27114505525114599087Rat
41212995LOC120093699uncharacterized LOC1200936997114598931114602376Rat
1309124Ttll1TTL family tubulin polyglutamylase complex subunit L17114619509114648850Rat
621547BikBCL2-interacting killer7114672277114691296Rat
1306698Mcatmalonyl-CoA-acyl carrier protein transacylase7114693612114705677Rat
2228Tspotranslocator protein7114720188114730450Rat
1305319Ttll12tubulin tyrosine ligase like 127114731890114751237Rat
1309015Scube1signal peptide, CUB domain and EGF like domain containing 17114759016114880995Rat
1308244Mpped1metallophosphoesterase domain containing 17114932221115011797Rat
41270848LOC120093700uncharacterized LOC1200937007114936982114941582Rat
1309065Efcab6EF-hand calcium binding domain 67115018971115200121Rat
7664573LOC102549885uncharacterized LOC1025498857115052178115055047Rat
40964737LOC120093701uncharacterized LOC1200937017115132026115133631Rat
69292Sult4a1sulfotransferase family 4A, member 17115216066115240156Rat
1307495Pnpla5patatin-like phospholipase domain containing 57115246050115257039Rat
1595843Pnpla3patatin-like phospholipase domain containing 37115293538115314077Rat
1303219Samm50SAMM50 sorting and assembly machinery component7115317472115341682Rat
1311485Parvbparvin, beta7115360254115445767Rat
41294035LOC120093972small nucleolar RNA SNORA487115454893115455033Rat
1597417Parvgparvin, gamma7115456183115475707Rat
1566029Shisal1shisa like 17115506947115611518Rat
1306472Rtl6retrotransposon Gag like 67115684812115689897Rat
1560568Btf3l6basic transcription factor 3 like 67115719756115720555Rat
41299699LOC120093900U6 spliceosomal RNA7115732509115732615Rat
1307954Prr5proline rich 57115795351115837880Rat
1303143Arhgap8Rho GTPase activating protein 87115842223115902094Rat
1308739Phf21bPHD finger protein 21B7115913704115984215Rat
3191Nup50nucleoporin 507116047960116065231Rat
1304694Kiaa0930KIAA0930 homolog7116067974116107678Rat
4888573Mir1249microRNA 12497116075593116075712Rat
1310633Upk3auroplakin 3A7116128981116139950Rat
1560783Fam118afamily with sequence similarity 118, member A7116152448116178976Rat
1308791Smc1bstructural maintenance of chromosomes 1B7116180987116242778Rat
1309033Ribc2RIB43A domain with coiled-coils 27116242863116257868Rat
41093664LOC120093910U6 spliceosomal RNA7116245573116245675Rat
41081806LOC120093908U6 spliceosomal RNA7116254588116254694Rat
1308667Fbln1fibulin 17116310582116390075Rat
40973876LOC120093703uncharacterized LOC1200937037116383438116389379Rat
41181053LOC120093704uncharacterized LOC1200937047116398327116412007Rat
621813Atxn10ataxin 107116441768116565093Rat
41280352LOC120094028U2 spliceosomal RNA7116455797116455959Rat
41328920LOC120093968small nucleolar RNA SNORA487116457329116457468Rat
1311441Wnt7bWnt family member 7B7116634817116679459Rat
41321956LOC120093705uncharacterized LOC1200937057116682789116691369Rat
7651247LOC102554082uncharacterized LOC1025540827116698159116711879Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10252D7Mit121367114727471114727581Ratregion
10253D7Wox201807114727449114727593Ratregion
10427D7Wox192577106839225106839474Ratregion
10431D7Wox182507106741074106741295Ratregion
10431D7Wox182507106773255106773476Ratregion
10447D7Wox212657113938271113938544Ratregion
10448D7Mgh32447113915925113916171Ratregion
10449D7Mit161467113886156113886318Ratregion
10472D7Wox301987114321734114321932Ratregion
33816D7Mit11927116738749116738842Ratregion
33969D7Mit422379481108594811326Ratregion
34096D7Mgh41487112729554112729683Ratregion
34511D7Mgh52497109483243109483487Ratregion
33670D7Mit22997116294265116294546Ratregion
33749D7Mit325679973595699736220Ratregion
33755D7Mit132717112308254112308525Ratregion
37360D7Rat682007112982090112982302Ratregion
37374D7Rat992057104237839104238038Ratregion
35264D7Rat1815279801139698011544Ratregion
37064D7Rat101207114108320114108439Ratregion
37760D7Rat591607109150206109150368Ratregion
37814D7Rat1002137100865992100866189Ratregion
37826D7Rat602067116651888116652094Ratregion
36661D7Rat151717101772987101773158Ratregion
36681D7Rat111507112087676112087821Ratregion
35110D7Rat1417879609007796090246Ratregion
35845D7Rat161407102920123102920263Ratregion
35921D7Rat121767111075397111075573Ratregion
39648D7Rat1272057115097879115098078Ratregion
39956D7Rat1312047106074002106074194Ratregion
38208D7Rat912067109572762109572972Ratregion
38306D7Rat971857116677010116677189Ratregion
40472D7Rat1761687105399233105399458Ratregion
38702D7Rat702137110979654110979877Ratregion
40036D7Rat1371757100005580100005753Ratregion
40056D3Rat1701347110020888110021016Ratregion
38886D7Rat962077102322484102322685Ratregion
38926D7Rat542027110282294110282489Ratregion
39058D7Rat532197100874472100874685Ratregion
39144D7Rat882237108555044108555253Ratregion
39254D7Rat672037105699315105699492Ratregion
39464D7Rat1382007102714177102714373Ratregion
39464D7Rat1382007102714177102714575Ratregion
39468D7Rat1591087100963583100963703Ratregion
42205D7Arb102007114727444114727640Ratregion
42207D7Arb122107106010152106010474Ratregion
42209D7Arb1319379747473097474932Ratregion
42838D7Rat2291297110029510110029651Ratregion
42839D7Rat2002497114883940114884192Ratregion
41172D7Rat1292147112419298112419498Ratregion
42343D7Rat21824979588575695886004Ratregion
40784D7Rat1351477102297359102297520Ratregion
40900D7Rat13422979841863998418864Ratregion
40966D7Rat1331537103945484103945643Ratregion
41014D7Rat1282497114527811114528048Ratregion
41130D7Rat1362047102228765102228945Ratregion
41664D7Rat1892007113526368113526566Ratregion
41784D7Rat1752177110260593110260793Ratregion
44282D7Got7817079844989898450068Ratregion
44283D7Got851437100006584100006727Ratregion
44284D7Got8123579796087097961107Ratregion
44285D7Got822377100749587100749814Ratregion
44286D7Got861497101283261101283410Ratregion
44293D7Got921267106539052106539184Ratregion
44294D7Got941977106100259106100454Ratregion
44295D7Wox61307106108321106108463Ratregion
44296D7Got892017102714117102714318Ratregion
44296D7Got892017102714117102714575Ratregion
44296D7Got892017102714262102714318Ratregion
44298D7Got901737103523502103523675Ratregion
44299D7Got882187102969204102969422Ratregion
44300D7Got93857106484369106484454Ratregion
44301D7Got952027107539708107539910Ratregion
44302D7Got871227102741501102741611Ratregion
44303D7Got961347107392709107392841Ratregion
44304D7Got971247109094323109094447Ratregion
44306D7Got981747109265344109265490Ratregion
44307D7Got992827110574849110575131Ratregion
44308D7Got1001387111516829111516967Ratregion
44309D7Wox41437114008785114008926Ratregion
44310D7Got1082057114122124114122326Ratregion
44311D7Got1112357114338684114338919Ratregion
44312D7Got1102647116298664116298928Ratregion
44315D7Got1092937115752253115752544Ratregion
60589D7Got7019079631961696319806Ratregion
60590D7Got7918379992957099929753Ratregion
60553D7Got1011507111524013111524161Ratregion
60554D7Got1021907112075963112076153Ratregion
60556D7Got1042267112522128112522356Ratregion
60557D7Got1052667113323205113323470Ratregion
60559D7Got1071727113442426113442598Ratregion
60567D7Got1511217104996442104996561Ratregion
629584D7Hmgc12357111862692111862898Ratregion
62494D7Uia12987103146217103146515Ratregion
66593D7Mco120179973598299736187Ratregion
66597D7Mco34077111390062111390441Ratregion
67237D7Arb117108446301108446618Ratregion
1630091D7Mco142897105991638105991927Ratregion
1630132D7Mco132927106079598106079890Ratregion
1631297D7Got215917102915988102916080Ratregion
1631395D7Got2481677100749627100749784Ratregion
1631724D7Mco112367106064796106065032Ratregion
1626928D7Mco243497106701452106701801Ratregion
1627028D7Mco202577106581668106581925Ratregion
1627389D7Mco232677106681370106681637Ratregion
1627404D7Mco192587106571501106571759Ratregion
1627428D7Mco212257106618511106618736Ratregion
1627463D7Mco182317106412447106412678Ratregion
1627493D7Mco222877106671821106672108Ratregion
1628403D7Got2331417111516808111516934Ratregion
1628923D7Got2411067104593739104593845Ratregion
1638601D7Mco94607105985375105985835Ratregion
1639323D7Got2161807104542858104543037Ratregion
1639574D7Wox471557110605830110605979Ratregion
1633261D7Got2171397104931313104931452Ratregion
1639954D7Mco122087106023527106023735Ratregion
1640500D7Got2187113037827113038050Ratregion
1640500D7Got2187113037827113038256Ratregion
1635190D7Mco153487106010163106010511Ratregion
1636302D7Mco173057106065119106065424Ratregion
1636780D7Wox451487110100824110100972Ratregion
1633665D7Wox461737106845277106845450Ratregion
1634503D7Got2271297110333109110333238Ratregion
7206010Maf07108077260108077495Ratregion
7191259Wnt7b3857116636793116637178Ratregion
7205758stSG6244665587101076225101076783Ratregion
7206730stSG60748507101953998101954302Ratregion
7206730stSG60748507101954033101954302Ratregion
7206420stm95tctg-3B10777115117948115119025Ratregion
7206478Hsf107108220039108220337Ratregion
7206488UniSTS:54663289979666502896665927Ratregion
5038706RH1266971987112770064112770262Ratregion
5038708AW8219841527112544379112544531Ratregion
5038766RH1273201957109496832109497027Ratregion
5038812RH1273472057114505611114505816Ratregion
5036185D15Wsu169e07108446283108446515Ratregion
5038844RH1273651907107401425107401615Ratregion
7206412mMaCIR1807477113011676113012423Ratregion
5036306Foxh13457108389162108389507Ratregion
5036436Nup502737116059555116059828Ratregion
5036490Sla9679853618598536281Ratregion
5039052RH1274851907107011671107011862Ratregion
5039052RH1274851907107062406107062596Ratregion
5035620WI-163131027114944844114944946Ratregion
5026042RH1306802107115508291115508501Ratregion
5026086RH1308572207114265546114265766Ratregion
5028639RH1257142567108813975108814231Ratregion
5028651RH1258232197108069253108069472Ratregion
7206188Atf42497111806080111806329Ratregion
5034051RH1411731927113861609113861801Ratregion
5034103RH1413731847108423264108423448Ratregion
5026158RH1311362187105018318105019995Ratregion
5026214RH1313521967116430908116431104Ratregion
5031546AU0479722657113840235113840500Ratregion
5031558AU0479301547110645256110645410Ratregion
5034183RH1416831977108259660108260110Ratregion
5034245RH1419151967111226069111226265Ratregion
5026368RH1319362027112827852112828331Ratregion
5034434BF4089831137105716625105716738Ratregion
5026564RH1326961907110725302110725492Ratregion
5026624RH1329181857110477583110477768Ratregion
5026722RH1332852007114730161114730361Ratregion
5026738RH1333462077109962874109963081Ratregion
5029263RH1441321167114131208114131324Ratregion
5032129RH944761877109788050109788237Ratregion
5032233X593821357109773294109773429Ratregion
5029607BF38623415179891015498910305Ratregion
5029675BI2778941057112173694112173799Ratregion
5032419C86064897106556107106556196Ratregion
5032421AV014541947114619815114619909Ratregion
5032473RH1272292317111312468111312699Ratregion
5032529STS-R927641247112341689112341813Ratregion
5035368BE1057671647107600559107600723Ratregion
5035494AI0598081507114275105114275255Ratregion
5027093RH667831767113338421113338597Ratregion
5029825BI2785942127110617212110617425Ratregion
5032575D22S12612157113810870113811085Ratregion
5032593RH1345781947100995253100995447Ratregion
5034922AI1786411037111271112111271215Ratregion
5034924AI1720621627112503103112503265Ratregion
5029941BF40003513579796386097963995Ratregion
5030055AW5314921517108437385108437536Ratregion
5032701RH1349791817107636074107636255Ratregion
5027489AW0608689279641752496417616Ratregion
5027491AI835086947111043223111043317Ratregion
5027493AI8487651377112469540112469677Ratregion
5033023RH1373081957114306856114307051Ratregion
5027643BB023497887107401427107401515Ratregion
5027663U182951647110593725110593889Ratregion
5027755RH946141257109344893109345018Ratregion
5033073RH1374902067112996536112996742Ratregion
5025130BB391580987111662491111662589Ratregion
5025132AW5534671267109948305109948431Ratregion
502786115.MHAa64f3.seq1707111116731111116901Ratregion
5030515BF4035112067114157868114158074Ratregion
5033255RH1381582127112630466112630678Ratregion
5025320RH1278632097111806076111806285Ratregion
5025328RH1278952017111222946111223147Ratregion
5033515RH1391101307105165886105166016Ratregion
5025492RH1285281837108446560108446743Ratregion
5028177D15Mit721357115846630115846765Ratregion
5030727BF4109191977105601805105602002Ratregion
5033719RH1398662147100120563100120777Ratregion
5025904RH1301481567110403026110403182Ratregion
5028567C7689123279763190297632134Ratregion
5028567C7689123279763190297632134Ratregion
5028569AU04168607108333545108333844Ratregion
5028571AU0160301747110451512110451686Ratregion
5028573AI4285571707112543635112543805Ratregion
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Position Markers

Flank 1: (D7Mit4)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2794,811,085 - 94,811,326 (+)MAPPER
Rnor_6.07103,815,550 - 103,815,788NCBI
Rnor_6.07103,867,558 - 103,867,802NCBI
Rnor_5.07104,385,465 - 104,385,703UniSTS
Rnor_5.07104,437,473 - 104,437,717UniSTS
RGSC_v3.47100,273,558 - 100,273,797RGD
RGSC_v3.47100,273,559 - 100,273,797UniSTS
RGSC_v3.17100,307,789 - 100,308,027RGD
Celera791,443,180 - 91,443,414UniSTS
RH 3.4 Map7657.0RGD
RH 3.4 Map7657.0UniSTS
RH 2.0 Map7534.0RGD
Cytogenetic Map7 RGD
Flank 2: (D7Mit11)
Rat AssemblyChrPosition (strand)Source
mRatBN7.27116,738,749 - 116,738,842 (+)MAPPER
Rnor_6.07126,525,294 - 126,525,386NCBI
Rnor_5.07126,236,795 - 126,236,887UniSTS
RGSC_v3.47123,635,756 - 123,635,849RGD
RGSC_v3.47123,635,757 - 123,635,849UniSTS
RGSC_v3.17123,669,947 - 123,670,254RGD
Celera7113,031,462 - 113,031,554UniSTS
RH 3.4 Map7908.6UniSTS
RH 3.4 Map7908.6RGD
RH 2.0 Map7689.3RGD
SHRSP x BN Map764.27RGD
Cytogenetic Map7 RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300112Bp183Blood pressure QTL 1833.51arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)7111182207135012528Rat
1331728Bp214Blood pressure QTL 2142.825arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)780221299124373579Rat
1331731Bp216Blood pressure QTL 2162.851arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)7102297359133492884Rat
1357336Gluco6Glucose level QTL 63.4blood glucose amount (VT:0000188)serum glucose level (CMO:0000543)794811326116294265Rat
1358361Sradr5Stress Responsive Adrenal Weight QTL 55.55adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)743747012108555253Rat
70159Bp61Blood pressure QTL 610.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)7103146217116738842Rat
631687Hcas1Hepatocarcinoma susceptibility QTL 13.90.001liver integrity trait (VT:0010547)liver tumorous lesion volume to total liver volume ratio (CMO:0001082)791412594129807172Rat
1357338Stl17Serum triglyceride level QTL 173.23blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)769736356112729554Rat
1357339Stl14Serum triglyceride level QTL 143.450.0001blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)7112729683133492707Rat
10450828Scl79Serum cholesterol level QTL 793.50.001blood HDL cholesterol amount (VT:0000184)blood low density lipoprotein cholesterol level (CMO:0000053)789867376101773158Rat
70173Niddm19Non-insulin dependent diabetes mellitus QTL 194.330.00005blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)764002457135012528Rat
1331723Bw25Body weight QTL 253.348body mass (VT:0001259)body weight (CMO:0000012)79324212394811326Rat
731176Glom5Glomerulus QTL 52.50.0035kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)796670164135012528Rat
1300151Bp181Blood pressure QTL 1813.36arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)753612714103945643Rat
2306821Bp335Blood pressure QTL 3350.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)7106571501135012528Rat
1300149Cm6Cardiac mass QTL 64.09heart mass (VT:0007028)heart left ventricle weight to body weight ratio (CMO:0000530)743747099102228765Rat
631201Panci1Pancreas inflammation QTL 100.001pancreas integrity trait (VT:0010560)percentage of study population displaying chronic pancreatitis at a point in time (CMO:0001214)7116677189127103496Rat
1331768Kidm10Kidney mass QTL 104.62096kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)780221299125221299Rat
731174Uae23Urinary albumin excretion QTL 232.40.0042urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)7104603555135012528Rat
1641908Teswt1Testicular weight QTL 13.28testis mass (VT:1000644)both testes wet weight (CMO:0000175)78022129994811326Rat
2313102Bmd79Bone mineral density QTL 792.30.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)794811085116738842Rat
61357Bp38Blood pressure QTL 381.60.052arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)741333674119109060Rat
1331748Bp215Blood pressure QTL 2154.043arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)7112308254133492884Rat
2316947Rf58Renal function QTL 587.8kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)768938720113886318Rat
1331746Kidm9Kidney mass QTL 93.934kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)780221299112308525Rat
7411654Foco25Food consumption QTL 259.30.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)775918751120918751Rat
1582240Sffal1Serum free fatty acids level QTL 13.40.0021blood free fatty acid amount (VT:0001553)serum free fatty acids level (CMO:0000547)7116677010124049952Rat
2299163Iddm34Insulin dependent diabetes mellitus QTL 342.71blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)791281130135012528Rat
2316955Stl24Serum triglyceride level QTL 247.1blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)768938720113886318Rat
2316952Pur22Proteinuria QTL 225.2urine protein amount (VT:0005160)urine protein level (CMO:0000591)768938720113886318Rat
1358891Bp265Blood pressure QTL 2652.21arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)783591953134666232Rat
1300179Kidm5Kidney mass QTL 53.51kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)743747012135012528Rat
2298475Eau6Experimental allergic uveoretinitis QTL 60.0029uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)784257275129257275Rat
2317035Aia16Adjuvant induced arthritis QTL 162.71joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)759238038104238038Rat
71114Niddm14Non-insulin dependent diabetes mellitus QTL 144.5blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)784257275129257275Rat
1298525Cm1Cardiac mass QTL 12.7heart mass (VT:0007028)heart wet weight (CMO:0000069)799736187103146217Rat
634331Pia17Pristane induced arthritis QTL 174.7joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)773829340130221005Rat
61397Bw17Body weight QTL 176.3body mass (VT:0001259)body weight (CMO:0000012)793595647106839474Rat
1358914Bp266Blood pressure QTL 266arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)783591953134666232Rat
631504Cm27Cardiac mass QTL 273.45heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)744421311118198041Rat
634322Bw12Body weight QTL 120body mass (VT:0001259)body weight (CMO:0000012)783153392128153392Rat
1549899Stresp8Stress response QTL 84.370.0008stress-related behavior trait (VT:0010451)defensive burying duration (CMO:0001961)790482196135012528Rat
2317052Aia17Adjuvant induced arthritis QTL 172.13joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)781737938126737938Rat
631529Tls2T-lymphoma susceptibility QTL 200.001thymus integrity trait (VT:0010555)percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911)780221299109401111Rat
1559283Emca4Estrogen-induced mammary cancer QTL 43.7mammary gland integrity trait (VT:0010552)percentage of study population developing mammary tumors during a period of time (CMO:0000948)762004452101773158Rat
1643004Pain2Pain QTL 21mechanical nociception trait (VT:0002734)self mutilation severity score (CMO:0002145)7946224698011544Rat
631663Bw6Body weight QTL 63.4body mass (VT:0001259)body weight (CMO:0000012)7111075573134976056Rat
7411607Foco15Food consumption QTL 150.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)775918751120918751Rat
1558655Swd4Spike wave discharge measurement QTL 43.680.0002brain electrophysiology trait (VT:0010557)brain spike-and-wave discharge severity grade (CMO:0001988)786983365131983365Rat
634336Anxrr17Anxiety related response QTL 173.66locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)7924703115097879Rat
1298528Bp169Blood pressure QTL 1690.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)761074194106074194Rat
1576303Ept7Estrogen-induced pituitary tumorigenesis QTL 73.7pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)762004452101773158Rat
631540Bw9Body weight QTL 94.5body mass (VT:0001259)body weight (CMO:0000012)769736226117455174Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general software used:one-way ANOVA and MAP MANAGER/QTX 2312767
qtl_general lineage: 2 seperate F2 intercrosses were generated one from grandmaternal GK and grandpaternal F344 other from grandmaternal F344 and grandpaternal GK 2312767
qtl_general number of animals used: 98 females 2312767
qtl_general measurement method: in the last 3 months modified fat-enriched chow was given; animals were killed at 215 days of age; cortical diaphyseal bone was measured and meta total vBMD (g/cm3) determined by pQCT (peripheral quantitative computed tomography) 2312767