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Gene: Lypd2 (Ly6/Plaur domain containing 2) Rattus norvegicus
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Symbol: Lypd2
Name: Ly6/Plaur domain containing 2
Description: Predicted to localize to the integral component of membrane. Orthologous to human LYPD2 (LY6/PLAUR domain containing 2); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; C60 fullerene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC300017; ly6/PLAUR domain-containing protein 2; RGD1307892; similar to Ars component B
Orthologs:
Homo sapiens (human) : LYPD2 (LY6/PLAUR domain containing 2)  HGNC  Alliance
Mus musculus (house mouse) : Lypd2 (Ly6/Plaur domain containing 2)  MGI  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : LYPD2 (LY6/PLAUR domain containing 2)
Canis lupus familiaris (dog) : LYPD2 (LY6/PLAUR domain containing 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Lypd2 (LY6/PLAUR domain containing 2)
Sus scrofa (pig) : LOC110260198 (ly6/PLAUR domain-containing protein 2-like)
Chlorocebus sabaeus (African green monkey) : LYPD2 (LY6/PLAUR domain containing 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07115,967,267 - 115,969,304 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7115,967,273 - 115,969,304 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07115,872,656 - 115,874,781 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47112,846,293 - 112,848,330 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.17112,880,530 - 112,885,063 (-)NCBI
Celera7103,018,710 - 103,020,747 (-)NCBICelera
Cytogenetic Map7q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Lypd2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1307892
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.