Slc52a2 (solute carrier family 52 member 2)

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Gene: Slc52a2 (solute carrier family 52 member 2) Rattus norvegicus

Analyze

Symbol:

Slc52a2

Name:

solute carrier family 52 member 2

RGD ID:

1560410

Description:

Enables riboflavin transmembrane transporter activity. Involved in riboflavin transport. Located in plasma membrane. Human ortholog(s) of this gene implicated in Brown-Vialetto-Van Laere syndrome 2 and riboflavin deficiency. Orthologous to several human genes including SLC52A2 (solute carrier family 52 member 2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; cobalt dichloride.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

G protein-coupled receptor 172A; G protein-coupled receptor 172B; Gpr172a; Gpr172b; LOC362942; porcine endogenous retrovirus A receptor 2; RGD1560410; riboflavin transporter 1; rRFT1; similar to G protein-coupled receptor 172B; solute carrier family 52, riboflavin transporter, member 2

RGD Orthologs

Human

Mouse

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SLC52A2 (solute carrier family 52 member 2)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Slc52a2 (solute carrier protein 52, member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Slc52a2 (solute carrier family 52 member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SLC52A2 (solute carrier family 52 member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SLC52A2 (solute carrier family 52 member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Slc52a2 (solute carrier family 52 member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SLC52A2 (solute carrier family 52 member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SLC52A2 (solute carrier family 52 member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Slc52a2 (solute carrier family 52 member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	SLC52A1 (solute carrier family 52 member 1)	HGNC	Ensembl, Panther, PhylomeDB
Homo sapiens (human):	FURIN (furin, paired basic amino acid cleaving enzyme)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	SLC52A1 (solute carrier family 52 member 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	SLC52A2 (solute carrier family 52 member 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Slc52a2 (solute carrier protein 52, member 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	slc52a2 (solute carrier family 52 member 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	rft-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Rift	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	rft-2	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	slc52a1	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	7	108,246,003 - 108,267,642 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	108,262,612 - 108,268,034 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	110,006,876 - 110,010,278 (+)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	7	112,230,573 - 112,233,981 (+)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	7	112,189,020 - 112,192,430 (+)	NCBI	Rnor_WKY
Rnor_6.0	7	117,605,038 - 117,608,460 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	117,605,050 - 117,608,460 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	117,575,356 - 117,596,091 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	114,590,752 - 114,594,162 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	7	104,613,931 - 104,617,341 (+)	NCBI		Celera
Cytogenetic Map	7	q34	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Brown-Vialetto-Van Laere syndrome (ISO)

Brown-Vialetto-Van Laere syndrome 1 (ISO)

Brown-Vialetto-Van Laere syndrome 2 (ISO)

epidermolysis bullosa simplex with muscular dystrophy (ISO)

genetic disease (ISO)

holoprosencephaly (ISO)

sensorineural hearing loss (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2-methylcholine (ISO)

3,4-methylenedioxymethamphetamine (ISO)

acrolein (ISO)

aflatoxin B1 (ISO)

alpha-pinene (ISO)

antirheumatic drug (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

bisphenol A (EXP,ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

carbon nanotube (ISO)

cobalt dichloride (EXP)

cyclosporin A (ISO)

dextran sulfate (ISO)

dichloroacetic acid (ISO)

epoxiconazole (ISO)

ethanol (ISO)

folic acid (ISO)

gentamycin (EXP)

inulin (ISO)

ketamine (EXP)

methotrexate (ISO)

Monobutylphthalate (EXP)

ozone (ISO)

paracetamol (EXP,ISO)

perfluorooctane-1-sulfonic acid (ISO)

resveratrol (ISO)

Soman (EXP)

temozolomide (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

trichloroethene (EXP)

trovafloxacin (ISO)

tunicamycin (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

flavin adenine dinucleotide biosynthetic process (ISO)

riboflavin metabolic process (ISO)

riboflavin transport (IBA,IDA,ISO)

Cellular Component

plasma membrane (IDA,ISO)

Molecular Function

4-hydroxybutyrate receptor activity (ISO,ISS)

protein binding (ISO)

riboflavin transmembrane transporter activity (IBA,IDA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
5.	Identification and functional characterization of rat riboflavin transporter 2.	Yamamoto S, etal., J Biochem. 2009 Apr;145(4):437-43. doi: 10.1093/jb/mvn181. Epub 2009 Jan 3.
6.	Identification and functional characterization of a novel human and rat riboflavin transporter, RFT1.	Yonezawa A, etal., Am J Physiol Cell Physiol. 2008 Sep;295(3):C632-41. doi: 10.1152/ajpcell.00019.2008. Epub 2008 Jul 16.

Additional References at PubMed

PMID:12477932	PMID:17197387	PMID:20463145	PMID:23413253	PMID:27702554	PMID:27964953	PMID:31601465

Genomics

Comparative Map Data

Slc52a2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	7	108,246,003 - 108,267,642 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	108,262,612 - 108,268,034 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	110,006,876 - 110,010,278 (+)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	7	112,230,573 - 112,233,981 (+)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	7	112,189,020 - 112,192,430 (+)	NCBI	Rnor_WKY
Rnor_6.0	7	117,605,038 - 117,608,460 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	117,605,050 - 117,608,460 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	117,575,356 - 117,596,091 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	114,590,752 - 114,594,162 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	7	104,613,931 - 104,617,341 (+)	NCBI		Celera
Cytogenetic Map	7	q34	NCBI

SLC52A2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	8	144,358,552 - 144,361,272 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p13 Ensembl	8	144,333,957 - 144,361,286 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	8	145,582,212 - 145,584,932 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	145,553,033 - 145,555,753 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	8	145,553,032 - 145,555,754	NCBI
Celera	8	141,757,606 - 141,760,327 (+)	NCBI		Celera
Cytogenetic Map	8	q24.3	NCBI
HuRef	8	140,696,155 - 140,698,884 (+)	NCBI		HuRef
CHM1_1	8	145,620,638 - 145,623,367 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	8	145,527,181 - 145,529,901 (+)	NCBI		T2T-CHM13v2.0

Slc52a2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	76,422,994 - 76,432,078 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	76,423,032 - 76,428,808 (+)	Ensembl		GRCm39 Ensembl
GRCm38	15	76,538,814 - 76,547,878 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	76,538,832 - 76,544,608 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	15	76,369,373 - 76,372,560 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	15	76,366,198 - 76,369,385 (+)	NCBI		MGSCv36	mm8
Celera	15	78,039,389 - 78,042,576 (+)	NCBI		Celera
Cytogenetic Map	15	D3	NCBI
cM Map	15	36.04	NCBI

Slc52a2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955454	2,979,889 - 2,982,203 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955454	2,944,169 - 2,982,203 (+)	NCBI	ChiLan1.0	ChiLan1.0

SLC52A2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1	8	137,375,495 - 137,378,378 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	8	141,122,292 - 141,124,985 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	8	144,111,766 - 144,114,392 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	8	144,112,498 - 144,114,319 (+)	Ensembl	panpan1.1		panPan2

SLC52A2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	13	37,779,896 - 37,786,653 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	13	37,783,562 - 37,786,621 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	13	37,742,477 - 37,749,280 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	13	38,255,411 - 38,262,214 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	13	38,255,350 - 38,262,219 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	13	37,947,241 - 37,954,043 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	13	38,055,893 - 38,062,696 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	13	38,532,243 - 38,539,046 (+)	NCBI		UU_Cfam_GSD_1.0

Slc52a2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	460,080 - 462,494 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936470	7,886,169 - 7,888,592 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLC52A2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	421,474 - 424,384 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	421,457 - 429,360 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	509,904 - 517,521 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SLC52A2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	138,570,451 - 138,573,072 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	8	138,571,081 - 138,573,079 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666039	1,287,635 - 1,290,261 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slc52a2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624735	12,486,016 - 12,491,331 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624735	12,465,032 - 12,491,809 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Slc52a2
119 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	887
Count of miRNA genes:	322
Interacting mature miRNAs:	422
Transcripts:	ENSRNOT00000047380
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
634336	Anxrr17	Anxiety related response QTL 17	3.66		locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	7	924703	115097879	Rat
61357	Bp38	Blood pressure QTL 38	1.6	0.052	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	41333674	119109060	Rat
1358361	Sradr5	Stress Responsive Adrenal Weight QTL 5	5.55		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	7	43747012	108555253	Rat
1300179	Kidm5	Kidney mass QTL 5	3.51		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	7	43747012	135012528	Rat
631504	Cm27	Cardiac mass QTL 27	3.45		heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	7	44421311	118198041	Rat
70173	Niddm19	Non-insulin dependent diabetes mellitus QTL 19	4.33	0.00005	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	7	64002457	135012528	Rat
2316947	Rf58	Renal function QTL 58	7.8		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	7	68938720	113886318	Rat
2316952	Pur22	Proteinuria QTL 22	5.2		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	7	68938720	113886318	Rat
2316955	Stl24	Serum triglyceride level QTL 24	7.1		blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	7	68938720	113886318	Rat
631540	Bw9	Body weight QTL 9	4.5		body mass (VT:0001259)	body weight (CMO:0000012)	7	69736226	117455174	Rat
1357338	Stl17	Serum triglyceride level QTL 17	3.23		blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	7	69736356	112729554	Rat
634331	Pia17	Pristane induced arthritis QTL 17	4.7		joint integrity trait (VT:0010548)	arthritic paw count (CMO:0001460)	7	73829340	130221005	Rat
7411654	Foco25	Food consumption QTL 25	9.3	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	7	75918751	120918751	Rat
7411607	Foco15	Food consumption QTL 15		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	7	75918751	120918751	Rat
631529	Tls2	T-lymphoma susceptibility QTL 2	0	0.001	thymus integrity trait (VT:0010555)	percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911)	7	80221299	109401111	Rat
1331746	Kidm9	Kidney mass QTL 9	3.934		kidney mass (VT:0002707)	right kidney wet weight (CMO:0000082)	7	80221299	112308525	Rat
1331728	Bp214	Blood pressure QTL 214	2.825		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	80221299	124373579	Rat
1331768	Kidm10	Kidney mass QTL 10	4.62096		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	7	80221299	125221299	Rat
2317052	Aia17	Adjuvant induced arthritis QTL 17	2.13		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	7	81737938	126737938	Rat
634322	Bw12	Body weight QTL 12	0		body mass (VT:0001259)	body weight (CMO:0000012)	7	83153392	128153392	Rat
1358891	Bp265	Blood pressure QTL 265	2.21		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	83591953	134666232	Rat
1358914	Bp266	Blood pressure QTL 266			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	83591953	134666232	Rat
71114	Niddm14	Non-insulin dependent diabetes mellitus QTL 14	4.5		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	7	84257275	129257275	Rat
2298475	Eau6	Experimental allergic uveoretinitis QTL 6		0.0029	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	7	84257275	129257275	Rat
1558655	Swd4	Spike wave discharge measurement QTL 4	3.68	0.0002	brain electrophysiology trait (VT:0010557)	brain spike-and-wave discharge severity grade (CMO:0001988)	7	86983365	131983365	Rat
1549899	Stresp8	Stress response QTL 8	4.37	0.0008	stress-related behavior trait (VT:0010451)	defensive burying duration (CMO:0001961)	7	90482196	135012528	Rat
2299163	Iddm34	Insulin dependent diabetes mellitus QTL 34	2.71		blood glucose amount (VT:0000188)	age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)	7	91281130	135012528	Rat
631687	Hcas1	Hepatocarcinoma susceptibility QTL 1	3.9	0.001	liver integrity trait (VT:0010547)	liver tumorous lesion volume to total liver volume ratio (CMO:0001082)	7	91412594	129807172	Rat
2313102	Bmd79	Bone mineral density QTL 79	2.3	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	7	94811085	116738842	Rat
1357336	Gluco6	Glucose level QTL 6	3.4		blood glucose amount (VT:0000188)	serum glucose level (CMO:0000543)	7	94811326	116294265	Rat
731176	Glom5	Glomerulus QTL 5	2.5	0.0035	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)	7	96670164	135012528	Rat
1331731	Bp216	Blood pressure QTL 216	2.851		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	102297359	133492884	Rat
70159	Bp61	Blood pressure QTL 61		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	103146217	116738842	Rat
731174	Uae23	Urinary albumin excretion QTL 23	2.4	0.0042	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	7	104603555	135012528	Rat
2306821	Bp335	Blood pressure QTL 335		0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	106571501	135012528	Rat

Markers in Region

AI556833

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	108,264,848 - 108,265,066 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	117,607,314 - 117,607,531	NCBI	Rnor6.0
Rnor_5.0	7	117,594,945 - 117,595,162	UniSTS	Rnor5.0
RGSC_v3.4	7	114,593,016 - 114,593,233	UniSTS	RGSC3.4
Celera	7	104,616,195 - 104,616,412	UniSTS
Cytogenetic Map	7	q34	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium	1		1						26	8	8
Low	2	43	56	41	19	41	8	11	48	27	33	11	8
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001109670	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006241826	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039079550	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039079551	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039079552	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039079554	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB362535	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC139605	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC133726	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473950	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000186	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSRNOT00000047380 ⟹ ENSRNOP00000046721

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	7	108,262,612 - 108,268,034 (+)	Ensembl
Rnor_6.0 Ensembl	7	117,605,050 - 117,608,460 (+)	Ensembl

RefSeq Acc Id:

NM_001109670 ⟹ NP_001103140

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	7	108,262,585 - 108,265,995 (+)	NCBI
Rnor_6.0	7	117,605,050 - 117,608,460 (+)	NCBI
Rnor_5.0	7	117,575,356 - 117,596,091 (+)	NCBI
RGSC_v3.4	7	114,590,752 - 114,594,162 (+)	RGD
Celera	7	104,613,931 - 104,617,341 (+)	RGD

Sequence:

show sequence

AGTCAGGAGCATTAGCCGGCGTCTTAATACGGTGCTTGGGCTGGGGTTTGGCTACCTTCCGGGC
AAAGCGGCATTCTCTTGGTGCTGGGCGGGCTGCTCCGGTCCCACGCCCCTGATGCACAACACTT
AGCGGAGGAGCCCTGAATAAAATCAGCCAGCCACGCCCCTCGCCGACCCATGCCGGCTGCCTGG
AGTTCGCTGCCATCCAGTTTGGTTTAGCCGTGCCGAGACTTGGTCCTCCACAAGCATCAAGGAC
TGTTCTTTCGTTGGTCCTCCTCTCCGGAACCACGCTTTAGGCCAGCTTCTTGCTCCTCTGCTTG
CCAGTCCTGTTCTGAGGGGTCCTGGTGCAGGCTTCTTGCTAGAGAAGCTTTGGACCTACGTGGG
GAAAAGAACGAATTGTTACCTTCGCTTTGTCCTGGAGGGCCCTCTTTGACCTTTGACCTAATGG
CAGCACCTCCACTGGGCCGACTGGTGCTGACCCATCTGCTGGTGGCCCTTTTCGGCATGGGCTC
CTGGATTGCGGTCAATGGGATCTGGGTAGAGCTACCTGTAGTGGTGAAAGAGCTCCCGGAGGGT
TGGAGCCTCCCTTCCTACCTCTCAGTGCTTGTGGCACTGGGGAACCTGGGTCTGCTGCTGGTGA
CCCTGTGGAGGCGTCTGGCTCCCGGCAAGAGCGAGCGGATCCCCATCCAAGTGGTTCAGGGGCT
GAGCATAGTGGGCACAGGCCTGCTGGCCCCTCTGTGGAGCAACATGGCCCTGGTGGCAGGACAG
CTCCACTCTGTGGCCTTCCTAACGCTGGCGTTTGTGCTGGCATTGTCCTGCTGTGCTTCCAATG
TCACTTTCCTGCCCTTTCTGAGCCACCTACCGCCTCCCTTTTTACGGTCTTTCTTCCTGGGCCA
GGGCCTGAGTGCCCTGCTGCCCTGTGTGCTGGCTCTGGCGCAGGGGGTGGGCCGCCTGGAGTGC
CTGCATGTGCCTGCCAACGGCACCACCGGGCCTCCGATCAAGGTGTCTCCCATCAATTTCCCTG
AGCGTTTCTCTGCTGGCACATTCTTTTGGGTGTTGACGGCCCTCCTGGGCACTTCAGCCGCCGC
CTTCCAAGGCCTCCTGTTACTACTGCCGTCCCCACCACCTGAAGCCACGATGGGTACCGGGCTT
CGGGTAGAAACACCAGGAACAGAGGAGGAAGAGGAAGAGGAAGAGGCCTCACCATTGCAGGAGC
CACCAGGCCAGGTGGCAAGCATTGTTTCCAGCCCAGACCCTAAGGCCCATCGGCTGTTTTCTTC
CCGAAGTGCCTGTCTACTGGGGCTGCTGGCTATCACCAACGCCCTGACCAACGGTGTGCTGCCC
GCTGTACAGAGCTTTTCCTGCCTGCCCTATGGGCGCCTGGCCTACCACTTGGCTGTCGTACTGG
GTAGCTCTGCCAATCCCCTTGCCTGCTTTCTGGCCATGGCAGTGTTGTGCAGGTCTCTGGCAGG
GCTGTATGGCCTCTGTCTGCTGGGCATGTTCTTTGGCACCTACCTGATGACACTGGCAGTCCTA
AGTCCCTGTCCCCCTCTGGTGGGCACCTCAGCAGGTGTGGTCCTCGTGGTGCTTTCATGGGTAC
TGTGTGCAGGCGTGTTCTCGTACATCAAGGTGGCGACCAGTTCCATGTTACACAGTGGAGGCCG
GCCAGCACTGCTCGCAGCTGGGGTAGCTATTCAGGTGGGCTCTCTGCTGGGCGCCATCGCCATG
TTCCCTCCCACCAGCGTCTACCCTGTGTTTCGCAGTGGAGAGGACTGTGTGGATCAGTGTGGCC
CTTGAACCGGGTCGCGTAGGAGTTACTTCACACTTGTCTCCACCCGGAGGGGGCCACAGCACCT
GCGTCCCGTGGCCCAAGGTGGCCTCCTGACGCACAGATAATATGGATATTTCACACTCCATATA
GAGACCTGGCTTTTGAGGAAAAGACCAGGGTGAGGACCAAAGAGCAGGCCCAGACCCAGGGATA
GGTTGGGGCTGCAGCCTTTCCCCTGGGACCTCTGTGGGATTTGCACAATAAAACATCTTCATCC
AATGGGTTGGTAATCCCACGAGCACAGCTCACTACGCCAGGCCTCCTTCCCTCAGTAGGCATCC
CCTCTTCCCCAAGATCCTAGTTACAGCTTCTGGGCAGATATTCCTCCACTCCCAGCTGGTGTTG
CCGGGCCTTGGGTGGCCTCAGGACTCCTGCGCCATTGCTTCTCTGGAACTACTTTGGGAGATGA
AGGCTGACTCCCAGGGCCCACGCGGGACTGAAGCAGGACAATGCTTCTGGTCGCCTGGACAATC
GGCAGAATCACTGCTCCACTGCAGGTCTTGAGGGCTTGAGGGTCTGGCATGGTTGGGAAGTCAA
TCAACAAGGGAACCTGGGGGAGGGGAGGGGTTTACACACAAGACCCTCTTGCCAAGATCTTCAT
GTCAGAGTTTGGTGCAAGGCCCAGGTGTAAAAGGAGCTCGGTGAAGCTGGCTTTTTATTTGTTT
GCTTTGCTTTTAAAAAAAAAATTACTTTATTCATGTACATGAGTACACTGTCGCTGTCTTCAGA
CACACCAGAAGAGGGCATCAGACCCCATTCCAGATGGTTGTGAGCTACCGTGTGGTTGCTGGGA
ATTGAACTCAGGACCTCTGGAAGAACAGTCAGTGTTCTTAACCCCTAAACCACCTCTCCAGCCC
TTGTTTTACCTTTTTATTTTATGTGCATGGGTGTTTTGCTTGAGGTCACAATTGAATGTCTGAT
CTTCTGGAACTGGAGTTAGACTGTTGTGAGCTGCTATGGGGGTGCTGGGAATTGAACCCTGGTC
CTCTGGAATACCAGTGAGTGATTTTAACCACAGAGCCTTCTCTCCAGCCCCAGGAGCTGGTTTT
TAAGGTTCTGACCCTCTCAGGATCTTTCAACTTGAGAACATTGCTTACCAGCCCTGGAGCTCCT
AGTTTCCAACTCCTGCAGT

hide sequence

RefSeq Acc Id:

XM_006241826 ⟹ XP_006241888

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	7	108,262,543 - 108,267,642 (+)	NCBI
Rnor_6.0	7	117,605,038 - 117,607,547 (+)	NCBI
Rnor_5.0	7	117,575,356 - 117,596,091 (+)	NCBI

Sequence:

show sequence

ACTTCCGCCGAGAGTCAGGAGCATTAGCCGGCGTCTTAATACGGTGCTTGGGCTGGGGTTTGGC
TACCTTCCGGGCAAAGCGGCATTCTCTTGGTGCTGGGCGGGCTGCTCCGGTCCCACGCCCCTGA
TGCACAACACTTAGCGGAGGAGCCCTGAATAAAATCAGCCAGCCACGCCCCTCGCCGACCCATG
CCGGCTGCCTGGAGTTCGCTGCCATCCAGTTTGGTTTAGCCGTGCCGAGACTTGGTCCTCCACA
AGCATCAAGGACTGTTCTTTCGTTGGTCCTCCTCTCCGGAACCACGCTTTAGGCCAGCTTCTTG
CTCCTCTGCTTGCCAGTCCTGTTCTGAGGGGTCCTGGTGCAGGCTTCTTGGTGAAAGAAGCTTG
ACCCTTTTCTCTGGAATAGCTAGAGAAGCTTTGGACCTACGTGGGGAAAAGAACGAATTGTTAC
CTTCGCTTTGTCCTGGAGGGCCCTCTTTGACCTTTGACCTAATGGCAGCACCTCCACTGGGCCG
ACTGGTGCTGACCCATCTGCTGGTGGCCCTTTTCGGCATGGGCTCCTGGATTGCGGTCAATGGG
ATCTGGGTAGAGCTACCTGTAGTGGTGAAAGAGCTCCCGGAGGGTTGGAGCCTCCCTTCCTACC
TCTCAGTGCTTGTGGCACTGGGGAACCTGGGTCTGCTGCTGGTGACCCTGTGGAGGCGTCTGGC
TCCCGGCAAGAGCGAGCGGATCCCCATCCAAGTGGTTCAGGGGCTGAGCATAGTGGGCACAGGC
CTGCTGGCCCCTCTGTGGAGCAACATGGCCCTGGTGGCAGGACAGCTCCACTCTGTGGCCTTCC
TAACGCTGGCGTTTGTGCTGGCATTGTCCTGCTGTGCTTCCAATGTCACTTTCCTGCCCTTTCT
GAGCCACCTACCGCCTCCCTTTTTACGGTCTTTCTTCCTGGGCCAGGGCCTGAGTGCCCTGCTG
CCCTGTGTGCTGGCTCTGGCGCAGGGGGTGGGCCGCCTGGAGTGCCTGCATGTGCCTGCCAACG
GCACCACCGGGCCTCCGATCAAGGTGTCTCCCATCAATTTCCCTGAGCGTTTCTCTGCTGGCAC
ATTCTTTTGGGTGTTGACGGCCCTCCTGGGCACTTCAGCCGCCGCCTTCCAAGGCCTCCTGTTA
CTACTGCCGTCCCCACCACCTGAAGCCACGATGGGTACCGGGCTTCGGGTAGAAACACCAGGAA
CAGAGGAGGAAGAGGAAGAGGAAGAGGCCTCACCATTGCAGGAGCCACCAGGCCAGGTGGCAAG
CATTGTTTCCAGCCCAGACCCTAAGGCCCATCGGCTGTTTTCTTCCCGAAGTGCCTGTCTACTG
GGGCTGCTGGCTATCACCAACGCCCTGACCAACGGTGTGCTGCCCGCTGTACAGAGCTTTTCCT
GCCTGCCCTATGGGCGCCTGGCCTACCACTTGGCTGTCGTACTGGGTAGCTCTGCCAATCCCCT
TGCCTGCTTTCTGGCCATGGCAGTGTTGTGCAGGTCTCTGGCAGGGCTGTATGGCCTCTGTCTG
CTGGGCATGTTCTTTGGCACCTACCTGATGACACTGGCAGTCCTAAGTCCCTGTCCCCCTCTGG
TGGGCACCTCAGCAGGTGTGGTCCTCGTGGTGCTTTCATGGGTACTGTGTGCAGGCGTGTTCTC
GTACATCAAGGTGGCGACCAGTTCCATGTTACACAGTGGAGGCCGGCCAGCACTGCTCGCAGCT
GGGGTAGCTATTCAGGTGGGCTCTCTGCTGGGCGCCATCGCCATGTTCCCTCCCACCAGCGTCT
ACCCTGTGTTTCGCAGTGGAGAGGACTGTGTGGATCAGTGTGGCCCTTGAACCGGGTCGCGTAG
GAGTTACTTCACACTTGTCTCCACCCGGAGGGGGCCACAGCACCTGCGTCCCGTGGCCCAAGGT
GGCCTCCTGACGCACAGATAATATGGATATTTCACACTCCATATAGAGACCTGGCTTTTGAGGA
AAAGACCAGGGTGAGGACCAAAGAGCAGGCCCAGACCCAGGGATAGGTTGGGGCTGCAGCCTTT
CCCCTGGGACCTCTGTGGGATTTGCACAATAAAACATCTTCATCCAA

hide sequence

RefSeq Acc Id:

XM_039079550 ⟹ XP_038935478

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	7	108,246,003 - 108,266,708 (+)	NCBI

RefSeq Acc Id:

XM_039079551 ⟹ XP_038935479

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	7	108,246,600 - 108,266,708 (+)	NCBI

RefSeq Acc Id:

XM_039079552 ⟹ XP_038935480

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	7	108,252,407 - 108,267,642 (+)	NCBI

RefSeq Acc Id:

XM_039079554 ⟹ XP_038935482

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	7	108,246,003 - 108,266,708 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001103140	(Get FASTA)	NCBI Sequence Viewer
	XP_006241888	(Get FASTA)	NCBI Sequence Viewer
	XP_038935478	(Get FASTA)	NCBI Sequence Viewer
	XP_038935479	(Get FASTA)	NCBI Sequence Viewer
	XP_038935480	(Get FASTA)	NCBI Sequence Viewer
	XP_038935482	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI33727	(Get FASTA)	NCBI Sequence Viewer
	B5MEV3	(Get FASTA)	NCBI Sequence Viewer
	BAG71130	(Get FASTA)	NCBI Sequence Viewer
	EDM15963	(Get FASTA)	NCBI Sequence Viewer
	EDM15964	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

NP_001103140 ⟸ NM_001109670

- UniProtKB:

A3KN99 (UniProtKB/Swiss-Prot), B5MEV3 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MAAPPLGRLVLTHLLVALFGMGSWIAVNGIWVELPVVVKELPEGWSLPSYLSVLVALGNLGLLL
VTLWRRLAPGKSERIPIQVVQGLSIVGTGLLAPLWSNMALVAGQLHSVAFLTLAFVLALSCCAS
NVTFLPFLSHLPPPFLRSFFLGQGLSALLPCVLALAQGVGRLECLHVPANGTTGPPIKVSPINF
PERFSAGTFFWVLTALLGTSAAAFQGLLLLLPSPPPEATMGTGLRVETPGTEEEEEEEEASPLQ
EPPGQVASIVSSPDPKAHRLFSSRSACLLGLLAITNALTNGVLPAVQSFSCLPYGRLAYHLAVV
LGSSANPLACFLAMAVLCRSLAGLYGLCLLGMFFGTYLMTLAVLSPCPPLVGTSAGVVLVVLSW
VLCAGVFSYIKVATSSMLHSGGRPALLAAGVAIQVGSLLGAIAMFPPTSVYPVFRSGEDCVDQC
GP

hide sequence

RefSeq Acc Id:	XP_006241888 ⟸ XM_006241826
- Peptide Label:	isoform X1
- UniProtKB:	A3KN99 (UniProtKB/Swiss-Prot), B5MEV3 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MAAPPLGRLVLTHLLVALFGMGSWIAVNGIWVELPVVVKELPEGWSLPSYLSVLVALGNLGLLL VTLWRRLAPGKSERIPIQVVQGLSIVGTGLLAPLWSNMALVAGQLHSVAFLTLAFVLALSCCAS NVTFLPFLSHLPPPFLRSFFLGQGLSALLPCVLALAQGVGRLECLHVPANGTTGPPIKVSPINF PERFSAGTFFWVLTALLGTSAAAFQGLLLLLPSPPPEATMGTGLRVETPGTEEEEEEEEASPLQ EPPGQVASIVSSPDPKAHRLFSSRSACLLGLLAITNALTNGVLPAVQSFSCLPYGRLAYHLAVV LGSSANPLACFLAMAVLCRSLAGLYGLCLLGMFFGTYLMTLAVLSPCPPLVGTSAGVVLVVLSW VLCAGVFSYIKVATSSMLHSGGRPALLAAGVAIQVGSLLGAIAMFPPTSVYPVFRSGEDCVDQC GP hide sequence

RefSeq Acc Id:

ENSRNOP00000046721 ⟸ ENSRNOT00000047380

RefSeq Acc Id:	XP_038935478 ⟸ XM_039079550
- Peptide Label:	isoform X1
- UniProtKB:	A3KN99 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_038935482 ⟸ XM_039079554
- Peptide Label:	isoform X1
- UniProtKB:	A3KN99 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_038935479 ⟸ XM_039079551
- Peptide Label:	isoform X1
- UniProtKB:	A3KN99 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_038935480 ⟸ XM_039079552
- Peptide Label:	isoform X1
- UniProtKB:	A3KN99 (UniProtKB/Swiss-Prot)

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-B5MEV3-F1-model_v2	AlphaFold	B5MEV3	1-450	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13695428

Promoter ID:

EPDNEW_R5951

Type:

initiation region

Name:

Slc52a2_1

Description:

solute carrier family 52 member 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	7	117,605,054 - 117,605,114	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1560410	AgrOrtholog
BioCyc Gene	G2FUF-32923	BioCyc
Ensembl Genes	ENSRNOG00000032561	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein	ENSRNOP00000046721	ENTREZGENE
	ENSRNOP00000046721.3	UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000047380	ENTREZGENE
	ENSRNOT00000047380.5	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7104339	IMAGE-MGC_LOAD
InterPro	Riboflavin_transptr	UniProtKB/Swiss-Prot
KEGG Report	rno:362942	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:156736	IMAGE-MGC_LOAD
NCBI Gene	362942	ENTREZGENE
PANTHER	PTHR12929	UniProtKB/Swiss-Prot
	SOLUTE CARRIER FAMILY 52, RIBOFLAVIN TRANSPORTER, MEMBER 2	UniProtKB/Swiss-Prot
Pfam	DUF1011	UniProtKB/Swiss-Prot
PhenoGen	Slc52a2	PhenoGen
UniProt	A3KN99	ENTREZGENE
	B5MEV3	ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary	A3KN99	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-02-24	Slc52a2	solute carrier family 52 member 2	Slc52a2	solute carrier family 52, riboflavin transporter, member 2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2012-07-16	Slc52a2	solute carrier family 52, riboflavin transporter, member 2	Gpr172a	G protein-coupled receptor 172A	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2011-04-29	Gpr172a	G protein-coupled receptor 172A	Gpr172b	G protein-coupled receptor 172B	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-02-28	Gpr172b	G protein-coupled receptor 172B	RGD1560410_predicted	similar to G protein-coupled receptor 172B (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-07	RGD1560410_predicted	similar to G protein-coupled receptor 172B (predicted)	LOC362942	similar to G protein-coupled receptor 172B	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC362942	similar to G protein-coupled receptor 172B			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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