Gene: Tbxt (T-box transcription factor T) Rattus norvegicus
Analyze
Symbol: Tbxt
Name: T-box transcription factor T
Description: ENCODES a protein that exhibits RNA polymerase II activating transcription factor binding (ortholog); RNA polymerase II distal enhancer sequence-specific DNA binding (ortholog); RNA polymerase II proximal promoter sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to retinoic acid; anatomical structure morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); ASSOCIATED WITH Chordoma (ortholog); Neural Tube Defects (ortholog); Sacral Agenesis with Vertebral Anomalies (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nuclear chromatin (ortholog); INTERACTS WITH bisphenol A; 2,3,7,8-tetrachlorodibenzodioxine (ortholog); 5-fluorouracil (ortholog)
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: brachyury; brachyury homolog; brachyury homolog (mouse); LOC292301; T; T brachyury transcription factor; T, brachyury homolog; T, brachyury homolog (mouse)
Orthologs:
Homo sapiens (human) : TBXT (T-box transcription factor T)  HGNC  AGR
Mus musculus (house mouse) : T (brachyury, T-box transcription factor T)  MGI  AGR
Chinchilla lanigera (long-tailed chinchilla) : Tbxt (T-box transcription factor T)
Pan paniscus (bonobo/pygmy chimpanzee) : TBXT (T-box transcription factor T)
Canis lupus familiaris (dog) : TBXT (T-box transcription factor T)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tbxt (T-box transcription factor T)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0152,887,067 - 52,900,691 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0154,139,554 - 54,147,385 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4146,937,223 - 46,944,988 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1146,940,188 - 46,947,933 (-)NCBI
Celera148,061,384 - 48,069,149 (-)NCBICelera
Cytogenetic Map1q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
 
More on Tbxt
AGR Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1310141
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2017-10-03
Status: ACTIVE