Gene: Vcan (versican) Rattus norvegicus
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Symbol: Vcan
Name: versican
Description: ENCODES a protein that exhibits protein phosphatase binding (ortholog); INVOLVED IN axon regeneration; response to wounding; glial cell migration (ortholog); ASSOCIATED WITH myocardial infarction; Myocardial Reperfusion Injury; adenoid cystic carcinoma (ortholog); FOUND IN cell surface; collagen-containing extracellular matrix; synapse; INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2,3,7,8-tetrachlorodibenzodioxine; 2-amino-2-deoxy-D-glucopyranose
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: chondroitin sulfate proteoglycan 2; chondroitin sulfate proteoglycan 2 (versican); chondroitin sulfate proteoglycan core protein 2; Cspg2; GHAP; glial hyaluronate-binding protein; large fibroblast proteoglycan; PG-M; versican core protein
Orthologs:
Homo sapiens (human) : VCAN (versican)  HGNC  Alliance
Mus musculus (house mouse) : Vcan (versican)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Vcan (versican)
Pan paniscus (bonobo/pygmy chimpanzee) : VCAN (versican)
Canis lupus familiaris (dog) : VCAN (versican)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Vcan (versican)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0218,490,102 - 18,587,340 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0218,363,890 - 18,463,115 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4219,712,629 - 19,801,443 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1219,634,740 - 19,688,742 (-)NCBI
Celera216,903,548 - 17,002,158 (-)NCBICelera
Cytogenetic Map2q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Vcan
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 619940
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2018-12-11
Status: ACTIVE