Lnnr3 QTL Report (Rattus norvegicus) - Rat Genome Database
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QTL: Lnnr3 (Liver neoplastic nodule remodeling QTL 3) Rattus norvegicus

Symbol: Lnnr3
Name: Liver neoplastic nodule remodeling QTL 3
RGD ID: 738010
Also known as: Hcrem3
Trait: liver integrity trait   (VT:0010547)    
Measurement Type: liver remodeling tumorous lesion number   (CMO:0001461)    
LOD Score: 2.94
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.021 - 41,179,397RGD_MAPPER_PIPELINERnor6.0
Rnor_5.021 - 60,242,597RGDRnor5.0
RGSC_v3.421 - 41,032,214RGDRGSC3.4
RGSC_v3.120 - 40,952,583RGD
Cross Type: intercross
Strains Crossed: COP F344/NRrrc 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Vertebrate Trait

Rat Strain
COP  (IEA)
F344/NRrrc  (IEA)

References

References - curated
1. De Miglio MR, etal., Int J Cancer 2004 Aug 10;111(1):9-16.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
619718Sv2csynaptic vesicle glycoprotein 2c22649575726707691Rat
619752Acot12acyl-CoA thioesterase 1222085705620901656Rat
2586F2rcoagulation factor II (thrombin) receptor22611876026135340Rat
3281Pde4dphosphodiesterase 4D24021999941468551Rat
70974Kif2akinesin family member 2A23814550738208765Rat
2403Crhbpcorticotropin releasing hormone binding protein22514147125153334Rat
620058PolkDNA polymerase kappa22730571827364906Rat
3043Map1bmicrotubule-associated protein 1B22967539129768750Rat
62046Thbs4thrombospondin 422234372722385855Rat
69419Ccnhcyclin H21359310013613910Rat
69413Rasgrf2RAS protein-specific guanine nucleotide-releasing factor 222146004121698937Rat
70951Glrxglutaredoxin226060322615944Rat
621496Bhmtbetaine-homocysteine S-methyltransferase22323657323256158Rat
727842LOC252890Z39 small nucleolar RNA21470007814700137Rat
621696Srek1splicing regulatory glutamic acid and lysine rich protein 123380603533841594Rat
620249Cetn3centrin 321210147312115009Rat
2412Hapln1hyaluronan and proteoglycan link protein 121835454218419077Rat
621682Nr2f1nuclear receptor subfamily 2, group F, member 1255699545579894Rat
621571Serinc5serine incorporator 522219550722310289Rat
621281Naip6NLR family, apoptosis inhibitory protein 623037750530418578Rat
628725Homer1homer scaffold protein 122290955023012303Rat
727945Otporthopedia homeobox22454639324554953Rat
620453Dmgdhdimethylglycine dehydrogenase22328937623370360Rat
621587Trim23tripartite motif-containing 2323425530034288140Rat
3156Ndufs6NADH:ubiquinone oxidoreductase subunit S622647117326471587Rat
727976Sgtbsmall glutamine rich tetratricopeptide repeat containing beta23418593834222428Rat
621124Cdk7cyclin-dependent kinase 723071064230735522Rat
2500Dhfrdihydrofolate reductase22193188721958927Rat
621518Nlnneurolysin23408697034185835Rat
1304857Slf1SMC5-SMC6 complex localization factor 1240951264195819Rat
620755Smn1survival of motor neuron 1, telomeric23036010130371147Rat
61977Ckmt2creatine kinase, mitochondrial 222142268021452797Rat
620866F2rl1F2R like trypsin receptor 122522232425235275Rat
620871F2rl2coagulation factor II (thrombin) receptor-like 222624038526245533Rat
621039Rps23ribosomal protein S2321982323419824804Rat
620089Oclnoccludin23052732730577218Rat
621712Foxd1forkhead box D122846006828462488Rat
2272CartptCART prepropeptide23012524930127408Rat
735041Pde8bphosphodiesterase 8B22471854824955533Rat
3537Rasa1RAS p21 protein activator 121361702113696531Rat
1305526Fam172afamily with sequence similarity 172, member A249427955547744Rat
2278Castcalpastatin214521111561669Rat
2803Hmgcr3-hydroxy-3-methylglutaryl-CoA reductase22748022427500654Rat
619940Vcanversican21849010218587340Rat
1306363Wdr41WD repeat domain 4122466810824717280Rat
1305799Depdc1bDEP domain containing 1B23998079640069982Rat
1306438Tent2terminal nucleotidyltransferase 222274629022798252Rat
727861Taf9TATA-box binding protein associated factor 923066440730668414Rat
2845Htr1a5-hydroxytryptamine receptor 1A23624662836247896Rat
1307450Zcchc9zinc finger CCHC-type containing 922090976420919848Rat
1306703Mblac2metallo-beta-lactamase domain containing 2295785019621297Rat
1307607Hexbhexosaminidase subunit beta22798392528003260Rat
1307061Arhgef28Rho guanine nucleotide exchange factor 2822573851426011429Rat
1308512Bdp1B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB23024845830340211Rat
708542Erap1endoplasmic reticulum aminopeptidase 1214108771449734Rat
1306583Trappc13trafficking protein particle complex 1323422339634254995Rat
1309515Rad17RAD17 checkpoint clamp loader component23063435330664618Rat
1305199Mctp1multiple C2 and transmembrane domain containing 1234008834089949Rat
2291Ccnb1cyclin B123078213330791106Rat
3625Scamp1secretory carrier membrane protein 122385802123941128Rat
1310204Ppwd1peptidylprolyl isomerase domain and WD repeat containing 123428885334313094Rat
1308095Btf3basic transcription factor 322841731628424436Rat
1333519Olr1276-psolfactory receptor pseudogene 127623548485335485401Rat
1309315Mrps36mitochondrial ribosomal protein S3623074062030750916Rat
1309131Cert1ceramide transporter 122736514527469797Rat
3329Pik3r1phosphoinositide-3-kinase regulatory subunit 123174232631826882Rat
1310461Cenpkcentromere protein K23431276634373945Rat
1311538Tbcatubulin folding cofactor A22444949824505351Rat
1559647RGD1559647similar to Psmc6 protein21428136014282566Rat
1310992Utp15UTP15, small subunit processome component22835192528370315Rat
2158Arsbarylsulfatase B22338515423543028Rat
1311570Ercc8ERCC excision repair 8, CSA ubiquitin ligase complex subunit23943461739473392Rat
1311752Dimt1DIMT1 rRNA methyltransferase and ribosome maturation factor23812056238144871Rat
1310888Aggf1angiogenic factor with G patch and FHA domains 122506880425095429Rat
1308372Tnpo1transportin 122905621929126882Rat
1310182Arskarylsulfatase family, member K228355682891059Rat
2300145Cox7ccytochrome c oxidase subunit 7C21469987814701903Rat
1306909Marveld2MARVEL domain containing 223061274630634308Rat
1310697Cwc27CWC27 spliceosome associated cyclophilin23471642034923060Rat
1308170Cd180CD180 molecule23282027532833223Rat
1310560Elovl7ELOVL fatty acid elongase 724037321140386643Rat
1308291Spata9spermatogenesis associated 9227298032768162Rat
1309296Ell2elongation factor for RNA polymerase II 2224561892525590Rat
1309854Gfm2GTP dependent ribosome recycling factor mitochondrial 222794919527984045Rat
1306931Slc30a5solute carrier family 30 member 523081568330845796Rat
1307678Adamts6ADAM metallopeptidase with thrombospondin type 1 motif, 623437414234589676Rat
1310308Ptcd2pentatricopeptide repeat domain 222957058129598328Rat
1306624Zswim6zinc finger, SWIM-type containing 623897804239042886Rat
1306062Ttc37tetratricopeptide repeat domain 37228912653037602Rat
1310256Ap3b1adaptor related protein complex 3 subunit beta 122402281524227522Rat
1309869Lhfpl2LHFPL tetraspan subfamily member 222370549123852021Rat
1308284RfesdRieske (Fe-S) domain containing227583822784366Rat
1310279Mccc2methylcrotonoyl-CoA carboxylase 223017501730246028Rat
1309660Tmem161btransmembrane protein 161B21225252212550368Rat
1308805Lysmd3LysM domain containing 3295262139532370Rat
1305356Srek1ip1SREK1-interacting protein 123492318734940410Rat
1309665Zbed3zinc finger, BED-type containing 322503950625052129Rat
1310139Mast4microtubule associated serine/threonine kinase family member 423244228532519052Rat
1310597Poc5POC5 centriolar protein22700030327030646Rat
1309360Rgs7bpregulator of G-protein signaling 7 binding protein23507208135619085Rat
1560462RGD1560462similar to ribosomal protein L10a23680704836807751Rat
1564936Atp6ap1lATPase H+ transporting accessory protein 1 like21978137519809355Rat
1565105Serf1small EDRK-rich factor 123034586130352114Rat
1566212RGD1566212similar to ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9)22601045226086391Rat
1564606RGD1564606similar to 60S ribosomal protein L23a23823069738231287Rat
1562559Arhgef26Rho guanine nucleotide exchange factor 2622710726327236336Rat
1334348Olr204olfactory receptor 204248589074859854Rat
1563954Msh3mutS homolog 322179004821931791Rat
1564672Shisal2bshisa like 2B23494671334965597Rat
1561129Tmem174transmembrane protein 17422874870628750237Rat
1560158Ndufaf2NADH:ubiquinone oxidoreductase complex assembly factor 223932214539434535Rat
1562952Erbinerbb2 interacting protein23388086033952806Rat
1562968Ssbp2single-stranded DNA binding protein 222041679520707838Rat
1334365Olr1270-psolfactory receptor pseudogene 127023535985135360529Rat
1561673Ccdc125coiled-coil domain containing 12523068584530726617Rat
1359492Tmem171transmembrane protein 17122879183128802135Rat
1559914Naip5NLR family, apoptosis inhibitory protein 523042782730478894Rat
1564729Gpr150G protein-coupled receptor 150228102802815991Rat
1303152Enc1ectodermal-neural cortex 122804921728061023Rat
1311133Ipo11importin 1123795298238120451Rat
1359478Arrdc3arrestin domain containing 3287329078745445Rat
1310499Gtf2h2general transcription factor IIH subunit 223049471830522716Rat
1311683Rhobtb3Rho-related BTB domain containing 3226276552683305Rat
1334018Olr205olfactory receptor 205248200164820966Rat
1333885Olr206olfactory receptor 206248003654801312Rat
1561110Fam151bfamily with sequence similarity 151, member B22202303822059166Rat
1333863Olr1803-psolfactory receptor pseudogene 180322098456920985207Rat
1562101Adgrv1adhesion G protein-coupled receptor V1289268439504455Rat
1562395Spz1spermatogenic leucine zipper 122214545722147053Rat
621335Nsa2NSA2 ribosome biogenesis factor22794254627949089Rat
1560076RGD1560076similar to 60S ribosomal protein L29 (P23)23950749039508022Rat
1359418Bhmt2betaine-homocysteine S-methyltransferase 222327232023289266Rat
1311829Mrps27mitochondrial ribosomal protein S2722959834429666711Rat
1359573Xrcc4X-ray repair cross complementing 421867449618927463Rat
1584743LOC679799similar to Nucleophosmin (NPM) (Nucleolar phosphoprotein B23) (Numatrin) (Nucleolar protein NO38)22686940326870466Rat
1587624Atg10autophagy related 1021985354620152918Rat
1585838LOC680951similar to ubiquitin-conjugating enzyme E2 variant 123011686230117784Rat
1583002Mtx3metaxin 322242745322440813Rat
1565396Fcho2FCH and mu domain containing endocytic adaptor 222892791829029271Rat
1582992Cmya5cardiomyopathy associated 522264669422744536Rat
1584363LOC684998hypothetical protein LOC684998255798815633875Rat
1583506Cenphcentromere protein H23076663730780123Rat
1561830Fam81bfamily with sequence similarity 81, member B230046883134667Rat
1560883RGD1560883similar to KIAA0825 protein241958714755065Rat
1563119Mef2cmyocyte enhancer factor 2C21165853411822788Rat
1562902S100zS100 calcium binding protein Z22518838125203627Rat
1588593LOC294635similar to spindlin isoform 221688672716887474Rat
1589594LOC502504similar to CG11883-PB, isoform B23567765635714861Rat
1564784Zfyve16zinc finger FYVE-type containing 1622206087922105822Rat
1587128LOC679555similar to mitochondrial ribosome recycling factor292819509283138Rat
1593792Polr3gRNA polymerase III subunit G295376429578551Rat
1589438LOC680638similar to muscle protein684252991405300495Rat
1589456Pou5f2POU domain class 5, transcription factor 2254370675438301Rat
1590642LOC680518similar to SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1236728013678251Rat
1590822LOC365970similar to 2B28288204688821486Rat
1587155LOC679528similar to peroxiredoxin 122505518425055826Rat
1590565LOC680595hypothetical protein LOC680595243567754357172Rat
1592071LOC309927similar to ribosomal protein L24236577483658332Rat
1587804LOC685971similar to eukaryotic translation elongation factor 1 delta2379027379490Rat
1587780LOC685995similar to discoidin, CUB and LCCL domain containing 121480404614810081Rat
1587831LOC685943similar to family with sequence similarity 51, member A1 homolog21433612014336780Rat
1588877LOC688411similar to eukaryotic translation elongation factor 1 alpha 221834530018346828Rat
1583248LOC685054similar to solute carrier family 25, member 5257457875747053Rat
1590893Fam169afamily with sequence similarity 169, member A22788474827941069Rat
1588887Edil3EGF like repeats and discoidin domains 321761611618128514Rat
1594507LOC365655similar to ribosomal protein L22 like 123052493430525390Rat
1594508LOC365654similar to ATP synthase beta chain, mitochondrial precursor22559936125601401Rat
1594510LOC365650similar to metal response element binding transcription factor 222699388426995373Rat
1596482Rps8-ps1ribosomal protein S8, pseudogene 1285800858580758Rat
1594513LOC365635hypothetical LOC36563521504163115042519Rat
1595695LOC499494similar to tubulin, alpha 1294960279497547Rat
1595696LOC499487hypothetical LOC499487233361393338527Rat
1595697Rpl17-ps1ribosomal protein L17, pseudogene 1221416972142280Rat
1595422LOC681402similar to Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (P18)23231853632319570Rat
1585601Jmyjunction mediating and regulatory protein, p53 cofactor22302650623097702Rat
1590323LOC684444similar to HIStone family member (his-41)22924774829248259Rat
1593816LOC685441similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI)295124319513010Rat
1594381LOC499522similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI)23649054836491169Rat
1594382LOC499517hypothetical LOC49951722983794729838512Rat
1594383Ankrd34bankyrin repeat domain 34B22200010622016764Rat
1594384LOC499500similar to transcriptional adaptor 3-like21345513313456504Rat
1596458Tdg-ps1thymine-DNA glycosylase, pseudogene 1286558628660019Rat
1594512LOC365643hypothetical LOC36564322216774022169128Rat
1595064Rnf180ring finger protein 18023571810035892578Rat
1596440LOC685256similar to small nuclear ribonucleoparticle-associated protein22384172823842540Rat
2320088LOC100361477hypothetical LOC10036147723236504732365923Rat
2320317LOC100361348hypothetical LOC10036134821721271317214856Rat
2320545LOC100361218zinc finger and BTB domain containing 26-like21506752715128039Rat
2320700LOC100361161bolA-like 1-like23059822830599139Rat
2322904Zfp366zinc finger protein 36622941016929498661Rat
2320812LOC100364548hypothetical LOC10036454822894381328947206Rat
2321734Iqgap2IQ motif containing GTPase activating protein 222616162826439067Rat
2322653LOC100360196SNRPN upstream reading frame22384130023841536Rat
2321913LOC100360544fibrillarin-like21007239710163469Rat
2323318Tmem167atransmembrane protein 167A21892754418946110Rat
2323520Ankrd31ankyrin repeat domain 3122757112927743668Rat
4888542Mir3597-2microRNA 3597-221188465811884775Rat
2325413Mir582microRNA 58224086375040863830Rat
2325602Mir9-2microRNA 9-221188467111884757Rat
2324600Smim15small integral membrane protein 1523931471439319874Rat
2325067Ankdd1bankyrin repeat and death domain containing 1B22703029527297045Rat
6488109LOC100912266uncharacterized LOC10091226622500721825016292Rat
6489600LOC100911981G/T mismatch-specific thymine DNA glycosylase-like272302847231267Rat
6486167LOC100912538centrin-3-like296825569696092Rat
6494512LOC100911241serine protease inhibitor Kazal-type 12-like23608882736096583Rat
6491128LOC100911678mRNA turnover protein 4 homolog251584635160188Rat
6490176LOC10091188360S ribosomal protein L6-like261303556132017Rat
6498684LOC100910438ankyrin repeat family A protein 2-like22837038728381268Rat
6498714LOC100910439olfactory receptor 146-like23543478435435719Rat
6498905LOC100910363olfactory receptor 149-like23539794535398880Rat
6495863LOC100910906serine protease inhibitor Kazal-type 14-like23601104536014007Rat
6499188LOC100910282olfactory receptor 8D1-like23538468335385566Rat
6495969LOC100910942serine protease inhibitor Kazal-type 6-like23606413036076039Rat
6499368LOC100910323olfactory receptor 8D1-like23539195035393112Rat
6499419LOC100910216casein kinase I isoform alpha-like21706742517068609Rat
6499443LOC100910217olfactory receptor 8D1-like23533230135333145Rat
6502717LOC10090962560S acidic ribosomal protein P0-like21239502612395825Rat
6499587LOC100910253olfactory receptor 8D1-like23535253035353518Rat
6499648LOC100910145olfactory receptor 147-like23531017035311123Rat
6499826LOC100910187olfactory receptor 8D2-like23532424535325174Rat
6500141LOC100910111olfactory receptor 147-like23529831435299288Rat
6500375LOC100910041olfactory receptor 146-like23522841835229353Rat
6500536LOC100910077olfactory receptor 145-like23528588935286845Rat
6497623LOC100910582ras-related protein Rap-1A-like23556799535568813Rat
6500725LOC100909993olfactory receptor 146-like23520966935210601Rat
6500932LOC100909922olfactory receptor 8D1-like23518582135186747Rat
6501087LOC100909958olfactory receptor 149-like23519158035192515Rat
6498270LOC100910467olfactory receptor 144-like23549782335498758Rat
6501343LOC100909885olfactory receptor 8D1-like23517850735179436Rat
6498423LOC100910500olfactory receptor 144-like23554923135550204Rat
6498517LOC100910402olfactory receptor 146-like23541603535416967Rat
7497054LOC102546726uncharacterized LOC10254672623252665032561153Rat
7387335Ak6adenylate kinase 623066440730676464Rat
7519050LOC102549756inter-alpha-trypsin inhibitor heavy chain H5-like23651892036520037Rat
7524903LOC102554178uncharacterized LOC10255417821242919012435395Rat
7525791LOC102555062uncharacterized LOC10255506221370458613726781Rat
7526937LOC102546885ralA-binding protein 1-like22887104728878264Rat
7505570LOC102551027uncharacterized LOC10255102722541944425466073Rat
7496117LOC10254886060S ribosomal protein L19-like21017432510182703Rat
7509688LOC102548021protein FAM98B-like255304895533098Rat
7532700LOC102548988uncharacterized LOC102548988224344982456418Rat
7517146LOC102546512uncharacterized LOC10254651223827583538340620Rat
7520447LOC102550730uncharacterized LOC10255073022025649020269763Rat
7662514LOC102546965heterogeneous nuclear ribonucleoprotein A3-like240041844008308Rat
7613080LOC102551263uncharacterized LOC10255126322556487525567834Rat
7613395LOC102555263uncharacterized LOC10255526323096716831082183Rat
7650850LOC102547000rho GTPase-activating protein 20-like22883416828836243Rat
7635624LOC102553770uncharacterized LOC10255377022993425829975058Rat
7652976LOC102554243uncharacterized LOC10255424321248568112489203Rat
7638416LOC102550768uncharacterized LOC10255076822524999825299355Rat
7654901LOC102550665uncharacterized LOC10255066522031362220315450Rat
7654966LOC102553545uncharacterized LOC10255354522976912029791616Rat
7627562LOC102557393uncharacterized LOC10255739323061220730625587Rat
7658944LOC102554754uncharacterized LOC10255475423048335030486931Rat
7629600LOC102551390uncharacterized LOC102551390288415908883955Rat
7645336LOC102549789uncharacterized LOC102549789256352365825696Rat
7611657LOC102549574high mobility group protein B1-like21849715218498406Rat
7588235LOC10254651060S ribosomal protein L17-like242349484238255Rat
7593096LOC102556264uncharacterized LOC10255626422834631328349391Rat
7593704LOC102548636uncharacterized LOC10254863622494997224955879Rat
7571143LOC102551152uncharacterized LOC10255115222553931325547937Rat
7594124LOC102548635uncharacterized LOC102548635214027451410759Rat
7572801LOC102548141uncharacterized LOC10254814122313665923143705Rat
7598408LOC102555325NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7-like22789050027891566Rat
7599584LOC102554363uncharacterized LOC10255436321308046013091568Rat
7547936LOC102550568uncharacterized LOC10255056822031717220323924Rat
7563506LOC102555324MLV-related proviral Env polyprotein-like21435803614359895Rat
7566528LOC102555137AT-rich interactive domain-containing protein 4A-like21372691613729803Rat
7567902LOC102549347uncharacterized LOC10254934723928193339314656Rat
7567988LOC102556482uncharacterized LOC10255648223742469437439626Rat
7554204LOC102549076glutathione S-transferase kappa 1-like225341872536718Rat
7691279LOC10255511660S ribosomal protein L29-like23076285930763554Rat
7751753LOC102546727uncharacterized LOC10254672723874315438756298Rat
7694562LOC10254754860S ribosomal protein L29-like22142122821422643Rat
7752683LOC102555389uncharacterized LOC102555389226114942612917Rat
7672686LOC102548891AKT-interacting protein-like23398348634014067Rat
7695496LOC102556361uncharacterized LOC10255636123721144937235682Rat
7676687LOC102546725uncharacterized LOC10254672522880385828809640Rat
7705669LOC102553998stathmin-like21221278012220837Rat
7683938LOC102546661uncharacterized LOC10254666123262688932742573Rat
7684128LOC102555233uncharacterized LOC10255523321415847114161648Rat
7685910LOC102553934uncharacterized LOC10255393423003774730070558Rat
7726444LOC10255547860S ribosomal protein L7a-like22814043828141443Rat
7716052LOC102548698uncharacterized LOC10254869822494996925032755Rat
7667264LOC102552356uncharacterized LOC10255235621118810111210807Rat
7741395LOC102556202uncharacterized LOC10255620223181673731826456Rat
7668930LOC102556051uncharacterized LOC10255605123167718831679963Rat
7701086LOC102548761succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like22498768224988946Rat
7722382LOC102548480low molecular weight phosphotyrosine protein phosphatase-like276108397611277Rat
7722649LOC102548570igE-binding protein-like282629668264768Rat
7679991LOC102554085chromobox protein homolog 3-like22767691727677658Rat
7680557LOC102554306uncharacterized LOC10255430621258642212601062Rat
7710032LOC102556480uncharacterized LOC10255648022852876828534146Rat
7710292LOC102552429uncharacterized LOC10255242921161116011657987Rat
7681003LOC102553999uncharacterized LOC10255399923007068430087433Rat
7681418LOC102554275uncharacterized LOC10255427523046036530465845Rat
9087824LOC103691411uncharacterized LOC10369141121147788211556355Rat
9092848LOC103691424ATP synthase subunit g, mitochondrial pseudogene289144648925512Rat
9093472LOC103691416uncharacterized LOC10369141621708330517087757Rat
9211959LOC103691431succinate dehydrogenase cytochrome b560 subunit, mitochondrial pseudogene22500408725005107Rat
9137253LOC103691419uncharacterized LOC10369141922058007620582987Rat
9139482LOC103691421keratin-associated protein 10-3-like22151983321524566Rat
9069440LOC103691432uncharacterized LOC10369143222539851225401692Rat
9078802LOC103691407uncharacterized LOC103691407277137417720781Rat
9179183LOC10369508940S ribosomal protein S13 pseudogene22571382525714302Rat
9179486LOC10369140360S ribosomal protein L23a pseudogene228052332805739Rat
9150057LOC103691449uncharacterized LOC10369144923890955738932901Rat
9185962LOC103691417uncharacterized LOC10369141722020221220203765Rat
9151583LOC103691446uncharacterized LOC10369144623687578736969702Rat
9106115LOC10369142560S ribosomal protein L7a pseudogene21095645710956924Rat
9191663LOC103691443uncharacterized LOC10369144323229584432298437Rat
9124045LOC103691413DNA-directed RNA polymerase III subunit RPC7-like21212380712131179Rat
9209500LOC103691405uncharacterized LOC103691405240811574089949Rat
9084001LOC103691400ATP synthase-coupling factor 6, mitochondrial pseudogene211222491122632Rat
9307820LOC103691422uncharacterized LOC10369142222282462222847622Rat
9225801LOC103695096uncharacterized LOC10369509623334406333346042Rat
9314470LOC10369142360S ribosomal protein L36 pseudogene22326063323261157Rat
9315610LOC103691410uncharacterized LOC10369141021098086510985183Rat
9322184LOC103691414uncharacterized LOC10369141421251801012519102Rat
9236579LOC103691415uncharacterized LOC10369141521307220713077469Rat
9237775LOC103690771ubiquitin-conjugating enzyme E2 variant 1 pseudogene2398355399827Rat
9247040LOC103691429ferritin light chain 1 pseudogene22419722624199438Rat
9291838LOC103691434uncharacterized LOC10369143422566706425684047Rat
9334188LOC103691402uncharacterized LOC103691402223765142392398Rat
9360496LOC103691430uncharacterized LOC10369143022403618324039307Rat
9251677LOC103691401uncharacterized LOC103691401215528181565494Rat
9292990LOC103691427uncharacterized LOC10369142722279653522812356Rat
9380714LOC103691420uncharacterized LOC10369142022055292320554953Rat
9338880LOC103691442uncharacterized LOC10369144223184504031892537Rat
9370599LOC103691435uncharacterized LOC10369143522625922826269751Rat
9362811LOC103691412uncharacterized LOC10369141221178707611797374Rat
9258212LOC103691409ubiquitin-conjugating enzyme E2 L3 pseudogene292255569230137Rat
9344213NEWGENE_1310139microtubule associated serine/threonine kinase family member 423285757633451802Rat
9344704LOC103691444uncharacterized LOC10369144423325221433253158Rat
9266099LOC103691408uncharacterized LOC103691408292831489293797Rat
9365433LOC103691406ATP synthase-coupling factor 6, mitochondrial pseudogene211110611111521Rat
9463885LOC103691445olfactory receptor 150-like23553133835532285Rat
9219979LOC103690683ATP synthase-coupling factor 6, mitochondrial pseudogene211160851116544Rat
9427709LOC103691418uncharacterized LOC10369141822033162320335848Rat
9429200LOC103691441uncharacterized LOC10369144123183563431840300Rat
9432498LOC103691426uncharacterized LOC10369142621434827614356765Rat
9403084C2H5orf64chromosome 2 open reading frame, human C5orf6423884039138847614Rat
9447147LOC103691439uncharacterized LOC10369143923160255431676754Rat
9447772LOC103691437uncharacterized LOC10369143722754187327558213Rat
9448459LOC103691438uncharacterized LOC10369143823061670730625587Rat
9454656LOC103691436uncharacterized LOC10369143622674374026757267Rat
9458376LOC10369145060S ribosomal protein L29 pseudogene23950258539503082Rat
9218342LOC103691440uncharacterized LOC10369144023182691831829121Rat
10043200Rps27a-ps29ribosomal protein S27a, pseudogene 2921107186011072306Rat
11361775LOC108350164Y-linked testis-specific protein 1-like22106969321071826Rat
11355672LOC108348103serine protease inhibitor Kazal-type 5-like23593202936004966Rat
11364647LOC108350152centromere protein R-like225059562513366Rat
11449327LOC108349941uncharacterized LOC10834994123854585238563501Rat
11454346LOC108350209uncharacterized LOC10835020923289626832896891Rat
11463100LOC108349913ribosome-recycling factor, mitochondrial pseudogene292819439284793Rat
11362376LOC108349926low-density lipoprotein receptor class A domain-containing protein 1-like22838760228413055Rat
11458063LOC108350222uncharacterized LOC10835022222245926622462659Rat
11367373LOC108350221histone H2A.Z pseudogene21443900014439437Rat
11369145LOC108349923uncharacterized LOC10834992322532575225344987Rat
11437895LOC108349934uncharacterized LOC10834993423277872732800328Rat
11440417LOC108350165peptidyl-prolyl cis-trans isomerase A-like22231496222317399Rat
11452898LOC108349910uncharacterized LOC108349910210940411096659Rat
11452971LOC108349942uncharacterized LOC10834994223880472738811850Rat
11453353LOC108349912uncharacterized LOC108349912227844202792010Rat
11413279LOC108349939uncharacterized LOC10834993923839028738427188Rat
11415567LOC108349929uncharacterized LOC10834992922952789529538665Rat
11419093LOC108350211uncharacterized LOC10835021124037440140382706Rat
11419886LOC108349937uncharacterized protein C11orf98 homolog23456863634570258Rat
11423879LOC108350223uncharacterized LOC10835022322455723224558675Rat
11426016LOC108350163Y-linked testis-specific protein 1-like22094458520955000Rat
11426534LOC10834991660S ribosomal protein L7a pseudogene21233295512333748Rat
11374184LOC108349924NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 pseudogene22788708027891588Rat
11374962LOC108349922uncharacterized LOC10834992222434504824360810Rat
11375584LOC108349925uncharacterized LOC10834992522834978428351756Rat
11375591LOC10835015340S ribosomal protein S6 pseudogene21887115118881235Rat
11408211LOC10835015440S ribosomal protein S26-like22757142227572862Rat
11410256LOC108349909uncharacterized LOC1083499092480088496073Rat
11388888LOC108349921uncharacterized LOC10834992122254814022554551Rat
11378949LOC108349930uncharacterized LOC10834993022970959829719005Rat
11412145LOC108349931uncharacterized LOC10834993122984227429846186Rat
11402434LOC108349917uncharacterized LOC10834991721244154812469810Rat
11380414LOC108349915uncharacterized LOC10834991521095910610991448Rat
11390954LOC108350224uncharacterized LOC10835022423197949731981431Rat
11402573LOC108349911small nuclear ribonucleoprotein Sm D1 pseudogene224680762471438Rat
11381588LOC108349935uncharacterized LOC10834993523280774832815404Rat
11392956LOC108350220endogenous retrovirus group K member 8 Pol protein-like282657698268151Rat
11478535LOC108349933uncharacterized LOC10834993323248097732481600Rat
11503988LOC108349927uncharacterized LOC10834992722878504028789883Rat
11506640LOC108349914uncharacterized LOC108349914297481129798819Rat
11507003LOC108349919uncharacterized LOC10834991922033046820347863Rat
11495474LOC108349928uncharacterized LOC10834992822946207629476461Rat
11498057LOC108349918uncharacterized LOC10834991821800997818016484Rat
11498521LOC108350161glyceraldehyde-3-phosphate dehydrogenase pseudogene21323583613238120Rat
11513946LOC108349940uncharacterized LOC10834994023832846238336929Rat
11514529LOC10834993660S ribosomal protein L21 pseudogene23441891434419428Rat
11483651LOC108350162zinc finger protein 180-like21542812915428771Rat
11484249LOC108349908uncharacterized LOC1083499082174726264579Rat
11486323LOC108349907uncharacterized LOC1083499072149993153034Rat
11487276LOC108350210uncharacterized LOC10835021024089716240970497Rat
11488271LOC108349920uncharacterized LOC10834992022150519521514903Rat
11490900LOC10834993840S ribosomal protein S29-like23470043234700645Rat
11494182LOC10834993260S ribosomal protein L21 pseudogene23137874331379318Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10966D2Uwm3420022647448626474685Ratregion
33822D2Mit29246254173365417577Ratregion
33943D2Mit1202231274413127638Ratregion
34397D2Mgh213324017183440171978Ratregion
34425D2Mgh113423408817534088303Ratregion
34514D2Mit3116523624786936248033Ratregion
36089D2Rat416821919091719191094Ratregion
36145D2Rat7317022626799526268162Ratregion
36171D2Rat715022778465227784801Ratregion
36205D2Rat217321423783014237997Ratregion
37520D2Rat11612023305521533055336Ratregion
37558D2Rat11423523624522336245442Ratregion
35250D2Rat1313623786147937861614Ratregion
35292D2Rat1817624106343941063603Ratregion
35427D2Rat812522934711629347240Ratregion
36896D2Rat913023270909632709219Ratregion
36912D2Rat1174294446799444852Ratregion
37880D2Rat9422023039349130393710Ratregion
36428D2Rat1018623496726934967461Ratregion
36532D2Rat1112723389190733892027Ratregion
36546D2Rat515022397618523976331Ratregion
35699D2Rat614222744309627443254Ratregion
35901D2Rat3136285792808579404Ratregion
35941D2Rat1215423914143439141586Ratregion
39728D2Rat19220622742296927423175Ratregion
39834D2Rat25218922328064723280826Ratregion
39946D2Rat251227261551326155358Ratregion
38414D2Rat9012123060576830605894Ratregion
38576D2Rat18224322383749123837719Ratregion
38770D2Rat18421923970344639703664Ratregion
38770D2Rat18421923970312839703664Ratregion
40024D2Rat18917521462132814621464Ratregion
40024D2Rat18917521456401714564153Ratregion
40242D2Rat19417522872786728728041Ratregion
38976D2Rat12421522618631826186520Ratregion
38976D2Rat12421522618609726186520Ratregion
39112D2Rat12828123108320331083484Ratregion
39280D2Rat15410322977551529775617Ratregion
39554D2Rat19013622298822122988322Ratregion
39558D2Rat25316422501297425013162Ratregion
42104D2Arb124023830587538306157Ratregion
42284D2Rat368202294488999449097Ratregion
42285D2Rat36924021150281911503048Ratregion
41158D2Rat19724824017172540171984Ratregion
41380D2Rat19515523316731033167474Ratregion
41402D2Rat19116022032143620321615Ratregion
42556D2Rat305168288391538839326Ratregion
42559D2Rat30821621937974619379944Ratregion
42561D2Rat30921722295636422956561Ratregion
42562D2Rat37820322829093428291134Ratregion
42564D2Rat31210823923522939235334Ratregion
42592D2Rat37722222075513920755374Ratregion
42592D2Rat37722222035523520355470Ratregion
40786D2Rat187146288471368847267Ratregion
41016D2Rat19310123055590730556013Ratregion
41538D2Rat19913324117925541179397Ratregion
43462D2Got1275285240598524333Ratregion
43463D2Got1422323590649635906723Ratregion
43464D2Got2119823786308237863289Ratregion
43465D2Got2018523786147437861662Ratregion
43466D2Got2328323712963237129923Ratregion
43468D2Got1918323764205337642223Ratregion
43469D2Got1717323999388839994060Ratregion
43470D2Got1819223912982539130016Ratregion
43471D2Got2223923904326739043505Ratregion
43472D2Got1613723880114038801276Ratregion
43473D2Got1511223511777835117879Ratregion
43474D2Got319622482037224820567Ratregion
43475D2Got18014922517786125178009Ratregion
43477D2Got417022513420425134373Ratregion
43479D2Got519422591498425915177Ratregion
43480D2Got722322862227928622501Ratregion
43481D2Wox3220623086096630861159Ratregion
43483D2Got19511423196722931967332Ratregion
43484D2Got617323109793731098127Ratregion
43485D2Got1014423170733231707485Ratregion
43486D2Got1210823371871433718819Ratregion
60790D2Wox1195231274413127635Ratregion
60750D2Rat31711224108829141088396Ratregion
60344D2Got822323060621830606432Ratregion
60282D2Got1129223304851833048791Ratregion
60288D2Got1329223353141633531706Ratregion
60316D2Got220522170278421702988Ratregion
61289D2Mco1920023923642339236609Ratregion
61291D2Uwm1513922165730921657459Ratregion
62486D2Uia522121332894713329167Ratregion
66385D2Mco4320023195264331952856Ratregion
66484D2Uia1727621266692112667200Ratregion
66656D2Mco1517423589954935899729Ratregion
66695D2Mco2522423371866933718888Ratregion
66701D2Mco2720124092443440924648Ratregion
66701D2Mco2720124092426540924648Ratregion
66732D2Mco3720023371862733718831Ratregion
67797D2Uwm1320121152247811522696Ratregion
67798D2Uwm1414721024631210246458Ratregion
67799D2Uwm1613022730716727307280Ratregion
67800D2Uwm1733023122461231224929Ratregion
1358020D2Chm4620422716115827161361Ratregion
1631604D2Ulb520023372791133728110Ratregion
1631679D10Ulb1149521887317518874669Ratregion
1632280D2Wox5619822514152725141724Ratregion
1632335D2Got37110723256258932562695Ratregion
1628275D2Ulb2521221633203316332244Ratregion
1628835D2Ulb1162223542152354376Ratregion
1629134D2Got37819421142982411430017Ratregion
1629481D2Got364258215557611556018Ratregion
1629938D2Got3689823025518030255279Ratregion
1638815D2Mco49258264437766444033Ratregion
1638933D2Ulb3310023078334530783444Ratregion
1639066D2Wox6323624531336245519Ratregion
1639378D2Ulb428823198901631989303Ratregion
1641309D2Ulb2214822690738726907534Ratregion
1633195D2Got392207281290378129243Ratregion
1633560D2Mco46887284880808488966Ratregion
1633622D2Ulb2313022766082427660953Ratregion
1639891D2Wox5122296810622968420Ratregion
1640519D2Got430167277587047758870Ratregion
1636434D2Got389132222564682256601Ratregion
1637446D2Wox6513123624531336245417Ratregion
1634602D2Got37411723484980434849938Ratregion
9685045rs6569782023899084838990848Ratregion
7364903rs641142880241248714124871Ratregion
7206266F2rl212022624440526244524Ratregion
7206386fb98c02.x1109224108213641083227Ratregion
7206416mEgCIR3792022070429720704326Ratregion
5038692RH12683922022392611923926338Ratregion
5039300RH127627203214523811452583Ratregion
5036416Mtap1b18022976845229768631Ratregion
5036450Pik3r118423174615731746340Ratregion
5039080RH127501201226154952615695Ratregion
5039114RH12752019222364320023643391Ratregion
5039114RH12752019222338446123384652Ratregion
5036769AU049142249215163991516647Ratregion
5035504ATP5B13722559972425599860Ratregion
5035661STS-Z400676321182267411822736Ratregion
5033925RH140637212224573262457537Ratregion
5026336RH13181619021210024312100432Ratregion
5026336RH131816190296813269681515Ratregion
5028991RH14309820223305997733060183Ratregion
5031702AU04743514321166408111664223Ratregion
5026458RH132292183297683949768576Ratregion
5029091RH14348916322042074620420907Ratregion
5029139RH143666110226276742627783Ratregion
5029143RH14368017722070762920707805Ratregion
5031906AU04675226723649519036495456Ratregion
5031924AU04668714022371841123718550Ratregion
5034664BF39085716723180132431801490Ratregion
5026748RH13338119722323668323236879Ratregion
5029265RH14413916422577990925780072Ratregion
5029271RH14416316922349402623494194Ratregion
5029319RH14434621323344533833445550Ratregion
5034796AI23233510222576943925769540Ratregion
5032277AI98785611721345649113456607Ratregion
5032413AI38563214022846192628462065Ratregion
5029891BE09746415522740688327407037Ratregion
5032669RH13485918622196118021961365Ratregion
5029951BE10354818521841624518416429Ratregion
5032791RH13531218722070762020707806Ratregion
5035270AI17859011823291986332919976Ratregion
5035270AI17859011823250457232504685Ratregion
5035318BM38701619723912964939129845Ratregion
5027465AW5586848422070248920702572Ratregion
5027467U504138423174616431746247Ratregion
5030089BE110197168230046013004768Ratregion
5032887RH13685121622385972323859938Ratregion
5032913RH13694718122327156223271742Ratregion
5025116AU02174920722905646929056675Ratregion
5030333BE10591718622145711921457304Ratregion
5030337BF40261824221995241119952653Ratregion
5027805RH9481217123174847331748733Ratregion
502794138.MMHAP15FLE5.seq18123149687931497059Ratregion
5033399RH13869414022520182925201968Ratregion
5025516RH12862220123388152033881720Ratregion
5025592RH128917211227646102764820Ratregion
5028157D13Mit25811322454477424544886Ratregion
5025646RH129115023947141039471593Ratregion
5031017BE12102417023048398830484157Ratregion
5031039BE12139814922193499021935138Ratregion
5028555C7839515122422496224225112Ratregion
5028557X5139610422967878029678883Ratregion
5053517RH14269410123316533333165433Ratregion
5055853RH14404018323428896634289148Ratregion
5056307RH14430320823901976639019973Ratregion
5056547RH144441124238626953862818Ratregion
5056811RH14459416522744463927444803Ratregion
5054213RH14309529523446351434463808Ratregion
5057478AI0305669021211470812114797Ratregion
5057478AI03056690296957919695880Ratregion
5055247RH14369111921849043618490554Ratregion
5059496BE09707620723571811135718317Ratregion
5057810BE10159415122732194927322099Ratregion
5055467RH14381813121894449318944623Ratregion
5055013RH14355511023174273431742843Ratregion
5057886BE10164516222530591425306075Ratregion
5058612BE10219119223149601931496210Ratregion
5055887RH14406018823034757430347761Ratregion
5056263RH14427714522157803421578178Ratregion
5059548BE09728015922575561025755768Ratregion
5059666BE09757621723420865234208868Ratregion
5056521RH14442611523475056734750681Ratregion
5056879RH14463320421985213219852335Ratregion
5058086BF38659818623309106733091252Ratregion
5058146BF38669819923468774434687942Ratregion
5056777RH14457416423931389639314059Ratregion
5059806BI28544116223912363039123791Ratregion
5059876BF40005912622611692526117050Ratregion
5059908BF3947799123031904130319131Ratregion
5050044RH133830214287449808745193Ratregion
5050086RH13385421522392611223926326Ratregion
5053183RH142501108290813489081455Ratregion
5059088AI07131720123070395630704156Ratregion
5050218RH13392921121181988111820091Ratregion
5053373RH14261113423458735834587491Ratregion
5053409RH14263212723383354533833671Ratregion
5053475RH14267010023328547433285573Ratregion
5057722BE10140616023061226530612424Ratregion
5050606RH13415322022145614621456375Ratregion
5053681RH14278914521978147019781614Ratregion
5053781RH14284711423066498530665098Ratregion
5049994RH13380120023078215630782355Ratregion
5050818RH13427619322966133529661527Ratregion
5051158RH13447319022264692522647114Ratregion
5050576RH13413619222195924021959431Ratregion
5053151RH14248315323807702138077173Ratregion
5053253RH142542104288836628883765Ratregion
5053269RH142551286225287372529022Ratregion
5051533AW5550948322195935021959432Ratregion
505166913.MMHAP86FRE7.seq18524107883341079017Ratregion
5054703RH14337715721361643113616587Ratregion
5041678RH12899519923066801730668215Ratregion
5041854RH12909715623078340230783557Ratregion
5043346RH129973182228344882834669Ratregion
5043496RH13005818022337014123370320Ratregion
5044278RH13051119322746955127469743Ratregion
5044768RH13079318022354476023544939Ratregion
5041452RH12886419121894682418947014Ratregion
5041584RH12894122023957433539574554Ratregion
5041620RH12896215523494673934946893Ratregion
5048730RH13307220821985413119854338Ratregion
5046414RH13173920522070253320702737Ratregion
5044432RH13059921823897816338978380Ratregion
5044528RH13065518721360674913606941Ratregion
5044580RH13068521223814015438140365Ratregion
5045284RH13108918823017514830175335Ratregion
5045348RH13112620022624596526246164Ratregion
5046516RH13179819323388061333880805Ratregion
5046542RH13181318222243058722430768Ratregion
5047436RH132327023061098430611166Ratregion
5045230RH13105918022274658722746766Ratregion
5047586RH13241319222385818823858379Ratregion
5047770RH13251818021812818218128361Ratregion
5049036RH13324921223947303439473245Ratregion
5049242RH13336719424006964740069840Ratregion
5046624RH13186121222506892825069139Ratregion
5046660RH13188115022234383722344513Ratregion
5046754RH13193521123471941734719627Ratregion
5047982RH13264020122957060929570809Ratregion
5048152RH13273821523501783435018048Ratregion
5047024RH13209020122611792926118129Ratregion
5048338RH13284619222514171525141906Ratregion
5047132RH13215118622244053722440722Ratregion
5039420RH12769618123081604030816220Ratregion
5039488RH12773420622798776227987967Ratregion
5039624RH12781218623074214630742331Ratregion
5042032RH12919918022748065527480834Ratregion
5047272RH13223219223814577038145961Ratregion
5047280RH132237181295863229586502Ratregion
5039920RH12798421923174553231745750Ratregion
5042478RH12945818022892611428926293Ratregion
5048514RH132947023418459134185644Ratregion
5048628RH13301321123042602030426230Ratregion
5048642RH13302120222874496028745161Ratregion
5049530RH133534023857471838574898Ratregion
5049642RH13359818122532176825321948Ratregion
5040558RH12835219522202320122023395Ratregion
5039868RH12795319123380822633808419Ratregion
5039890RH12796621922560121025601425Ratregion
5039950RH12800220022385163923851838Ratregion
5043568RH13010020422966643529666638Ratregion
5041236RH12874118023422347034223649Ratregion
5042878RH129699023428785334288033Ratregion
5042886RH12970318323832729338327475Ratregion
5042952RH12974322022422729924227518Ratregion
5074934RH13830317522635452826354702Ratregion
5071968RH13538920022145901021459209Ratregion
5072024RH135421211290807269080936Ratregion
5072138RH13667315523025042930250583Ratregion
5073862RH13768220722906125029061456Ratregion
5075402RH138573233214613921461624Ratregion
5072472RH13686915123067613930676289Ratregion
5072504RH13688719922616172226161920Ratregion
5074176RH13786514222224923222249373Ratregion
9685048rs105751187024038452140384521Ratregion
5075872RH13884613622902490129025036Ratregion
5075936RH13888315224116546441165615Ratregion
5076104RH13898121822964606429646281Ratregion
5072736RH13702318523408706334087247Ratregion
5076958RH13947720622670065626700861Ratregion
5074800RH138225249230268503027098Ratregion
5077160RH13959619623814547838145673Ratregion
5079394RH14097018522611910026119284Ratregion
5077190RH13961418322798515427985336Ratregion
5078006RH14008720822901543429015641Ratregion
5078048RH14011221822835390628354123Ratregion
5078088RH14013720821812788018128087Ratregion
5076504RH13921414423078342330783566Ratregion
5077428RH139751206230065193006724Ratregion
5077502RH13979321821867462118674838Ratregion
5078410RH14032624823814692738147174Ratregion
5079748RH14118021421182242311822636Ratregion
5079784RH14120118122201582222016002Ratregion
5077762RH13994421723285759532857811Ratregion
5077762RH13994421723244230432442520Ratregion
5078602RH14043912522303336123033485Ratregion
5079906RH14127118323507564035075822Ratregion
5079958RH14130118323422237934222561Ratregion
5080110RH14138819722402386824024064Ratregion
5080168RH14142420522210627722106481Ratregion
5078578RH14042512421841847318418596Ratregion
5079196RH14079113922794073727940875Ratregion
5070792RH13470818923024858830248776Ratregion
5070868RH134751220244889394489158Ratregion
5071134RH13490621823380619733806417Ratregion
5073254RH13732918022505185425052033Ratregion
5078654RH14047110622798515427985259Ratregion
5071370RH13504318022702854527028724Ratregion
5071678RH13522120522455927124559475Ratregion
5071102RH134887183227694212769603Ratregion
5073352RH13738615423283293932833092Ratregion
5073356RH13738916222091036420910525Ratregion
5073458RH13744821022975456729754776Ratregion
5072050RH13543620823948417139484378Ratregion
5072076RH135451127224709832471109Ratregion
5074396RH13799313323424790934248041Ratregion
5074460RH13802912023492540434925523Ratregion
5071284RH13499420223035186730352068Ratregion
5072200RH136711126228358152835940Ratregion
5074552RH13808315323179625831796410Ratregion
5074718RH13817812023179986731799986Ratregion
5071752RH13526419623076672130766916Ratregion
5071762RH13527020021894594218946141Ratregion
5063368BI30171219323451855234518744Ratregion
5063480BF39890718522984564829845832Ratregion
5066686AU04821117523911695039117124Ratregion
5066714AU04819419622553281525532985Ratregion
5066714AU04819419622553279025532985Ratregion
5066810AU04813713722290108022901216Ratregion
5066992AU048029126256962875696412Ratregion
5067132AU04794313723015443630154572Ratregion
5068096AU04735019323959870739598894Ratregion
5068376AU04718414823960958039609722Ratregion
5068692AU04699120021479014214790341Ratregion
5068836AU046895187226734932673679Ratregion
5069384AU04653417122031429120314458Ratregion
5070055RH9444319923624862036248818Ratregion
5070189RH9452417922611967526119853Ratregion
5069614AU04638219324055796340558155Ratregion
5070474AV01117214221181988111820022Ratregion
5069262AU04661318123062093730621108Ratregion
5062140BF39749615223905180439051955Ratregion
5060530BE11029717723947082139470997Ratregion
5065628BI30364712021892568218925801Ratregion
5062674BF40377422024072976340729982Ratregion
5064250BE12088315422905680129056954Ratregion
5063650BE10790516422001596020016123Ratregion
5065168BE12106115522702424627024400Ratregion
5063892BE12017915222798334527983496Ratregion
5064080BE11400916022940321429403373Ratregion
5065668BF41272519523094877830948972Ratregion
5065780BE109854151255943635594513Ratregion
5060882BE10465220121841884218419042Ratregion
5066068BE11670415622852586228526017Ratregion
5066072BE11673415823035923930359397Ratregion
5062914AA95555318624037148640371671Ratregion
5064518BI30223615022215417322154322Ratregion
5064594BE10816919023076465630764844Ratregion
5066124BF41348520722342464623424859Ratregion
5066238PMC123630P1650254375565438205Ratregion
5063122BE1137769222906031429060405Ratregion
5064756BE10845516222669424026694401Ratregion
5066376AU048394263238560683856330Ratregion
5064866BE108652164255937595593922Ratregion
5064910BF39990515422826726328267414Ratregion
5064958BF405334182236246923624873Ratregion
5066452AU04834822422898211228983652Ratregion
5066530AU048302148247160454716192Ratregion
5061648BF39698512922835252128352649Ratregion
5082007BF40904122122314336623143586Ratregion
5082099BF40950112922650077726500905Ratregion
5082247BE11901519022296918222969371Ratregion
5086080AI17931415022656869326568848Ratregion
5087161AI22869819722794133427941531Ratregion
5087270AW53220916522941398329414147Ratregion
5087724Ccnb1-rs113823078407130784388Ratregion
5088285AU04847817223170325231703415Ratregion
5089509AU04919826123274870832748966Ratregion
5090625AU04986515622340163223401787Ratregion
5083783AI41290013022196209721962226Ratregion
5089663AU049289237289120838912319Ratregion
5090415AU04973722723022027130220497Ratregion
5090445AU049754207240185524018758Ratregion
5090643AU04987518623264320532643368Ratregion
5084194AA94506720623799856937998776Ratregion
5081499BI299099177252601465260322Ratregion
5081499BI299099177251185565118732Ratregion
5084652AI00817122023908693239087151Ratregion
5081929BE11877215821182116311821320Ratregion
5084812AI1793779123361286633612957Ratregion
5084858AI10299919921464476814644966Ratregion
5087781D13Die2516723044547830445644Ratregion
5087781D13Die2516723039662630396792Ratregion
5088011UniSTS:14392820522968495329685157Ratregion
5082203BI27412420323928675139286953Ratregion
5082429BE11937216822509429425094461Ratregion
5085487BE09695915123321458033214729Ratregion
5090745AU04993813523270452632704646Ratregion
5081030RH14192418021360929813609477Ratregion
5085286AI59920615022469786124698010Ratregion
5081152RH14199518822151411521514302Ratregion
5081316RH14209018822245931922459506Ratregion
5090073AU04953421521801277118012980Ratregion
5082633BE11988616822306247323062640Ratregion
5085960AI01400616022617239826172557Ratregion
5080724RH14174518622997481329974998Ratregion
5086217BQ20606221822710608127106298Ratregion
5086357AA89158519022838077728380967Ratregion
5081124RH14197820523507217835072382Ratregion
5083147BF39087815623624842136248576Ratregion
5083171BF39091816123507445835074618Ratregion
5081434AI54811418223275274432752925Ratregion
5081747BE11801116622790411527904280Ratregion
5081999BG37253615122730821927308369Ratregion
5082001BG37254013822146119021461327Ratregion
5085792BM39231216523457873934578903Ratregion
5085840BF38818520323048247830482680Ratregion
5085842BM38290715223408834734088498Ratregion
5083881AI01065111623932025039320365Ratregion
5507547G1064723721181882011819056Ratregion
5503877CRTL124621840806618408311Ratregion
5505271Hmgcr022748142227482257Ratregion
5505901UniSTS:4960186322238170722381769Ratregion
5506054UniSTS:49824518622192812721928312Ratregion
5506254G35939126721339359613394862Ratregion
5506915G4794025523916851239168766Ratregion
5506505D16S506135322345358823454940Ratregion
5506853G4646529623282311532823410Ratregion
5499575D4Ertd639e22223078405130784896Ratregion
5500133UniSTS:23708520122793842227938622Ratregion
5500135UniSTS:23709011522905648029056594Ratregion
5499715UniSTS:234165229292825859282813Ratregion
5501229PMC156147P911022612133326121442Ratregion
5500129UniSTS:237062215295351249535338Ratregion
5500143UniSTS:23709610723064027630640382Ratregion
5500318GDB:187013120022980574129806940Ratregion
5500615RH136262022794722927947516Ratregion
5501518G0732917123388086933881039Ratregion
5501620REN122C19023794333037944390Ratregion
5501844MARC_15693-15694:1017691889:161923428332234283940Ratregion
5505839UniSTS:49593395214218691421963Ratregion
5506183UniSTS:49873717523078399030784344Ratregion
5506210Mbd333822392598423926321Ratregion
5502110MARC_4375-4376:966894539:1200236736163673811Ratregion
5502551RH125269125288206768820800Ratregion
5502760THBS4022235477822355126Ratregion
5502873Foxd185122846151828462368Ratregion
10755484rs10581240221667927216679272Ratregion
Position Markers

Peak: (D2Rat187)
Rat AssemblyChrPosition (strand)Source
Rnor_6.028,847,136 - 8,847,267NCBI
Rnor_5.028,732,147 - 8,732,278UniSTS
Celera27,620,839 - 7,620,970UniSTS
SHRSP x BN Map20.0RGD
SHRSP x BN Map20.0UniSTS
Flank 2: (D2Rat199)
Rat AssemblyChrPosition (strand)Source
Rnor_6.0241,179,255 - 41,179,397NCBI
Rnor_5.0260,242,455 - 60,242,597UniSTS
RGSC_v3.4241,032,071 - 41,032,214RGD
RGSC_v3.4241,032,072 - 41,032,214UniSTS
RGSC_v3.1240,952,440 - 40,952,583RGD
Celera237,077,901 - 37,078,043UniSTS
Cytogenetic Map2q16UniSTS
SHRSP x BN Map218.4498UniSTS
SHRSP x BN Map218.4498RGD


QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631682Bp115Blood pressure QTL 1154.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2135167060Rat
738010Lnnr3Liver neoplastic nodule remodeling QTL 32.94liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)2141179397Rat
61355Bp36Blood pressure QTL 362.9blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)23127638105149020Rat
9590080Insglur4Insulin/glucose ratio QTL 428.70.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)2368630848686308Rat
731166Mamtr2Mammary tumor resistance QTL 20.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)2541733610246458Rat
61368Mcs1Mammary carcinoma susceptibility QTL 14.4mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)2541733621657459Rat
1600379Mcs18Mammary carcinoma susceptibility QTL 182.6mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)2541733642777046Rat
738012Anxrr3Anxiety related response QTL 33.8exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)2789360052893600Rat
1578664Bmd9Bone mineral QTL density 95femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)2944467949615930Rat
1578671Bmd10Bone mineral density QTL 105.4femur mineral mass (VT:0010011)cortical volumetric bone mineral density (CMO:0001730)2944467968866454Rat
10755430Coatc6Coat color QTL 60.02576coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)21055527555555275Rat
731184Mamtr4Mammary tumor resistance QTL 40.0003mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)21423783059237830Rat
10755499Bp389Blood pressure QTL 3892.61arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)216679272245624402Rat
1357990Ael1Aortic elastin QTL 13.10.00091aorta elastin amount (VT:0003905)aortic elastin21901646564016465Rat
731167Glom4Glomerulus QTL 42.40.0082kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)22027698165276981Rat
2300168Bmd47Bone mineral density QTL 476.60.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)22064137165641371Rat
7387318Stl32Serum triglyceride level QTL 323.20.0003blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)22261295267612952Rat
10402051Gdil2Gastrointestinal dilation QTL 2enteric ganglion morphology trait (VT:0001045)length of intestine affected by colonic aganglionosis to total length of colon ratio (CMO:0001836)22328064775687607Rat
1302794Stl27Serum triglyceride level QTL 274.40.0001blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)223837491149614623Rat
1358894Kidm24Kidney mass QTL 244.03kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)223837491169852800Rat
1358899Kidm23Kidney mass QTL 233.88kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)223837491169852800Rat
1358901Cm38Cardiac mass QTL 382heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)223837491169852800Rat
1358904Cm39Cardiac mass QTL 392.26heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)223837491169852800Rat
1358910Kidm27Kidney mass QTL 275.77kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)223837491169852800Rat
1358911Kidm28Kidney mass QTL 285.42kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)223837491169852800Rat
1358913Cm41Cardiac mass QTL 412.73heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)223837491218957222Rat
1358917Cm42Cardiac mass QTL 422.82heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)223837491218957222Rat
1358887Bw50Body weight QTL 502.39body mass (VT:0001259)body weight (CMO:0000012)223837719169852670Rat
1358908Bw49Body weight QTL 493.36body mass (VT:0001259)body weight (CMO:0000012)223837719169852670Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)22618609783819822Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)22618609783819822Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)22618609783819822Rat
1354603Bp243Blood pressure QTL 2433.9arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)226186097135654963Rat
2290453Scl55Serum cholesterol level QTL 552.83blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)226186097142053534Rat
1331764Bp205Blood pressure QTL 2053.476arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)22626799543133606Rat
1643006Pain1Pain QTL 13.630.005mechanical nociception trait (VT:0002734)self mutilation severity score (CMO:0002145)22626799548676716Rat
12879841Cm87Cardiac mass QTL 870.026heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)227161361148295267Rat
12879842Cm88Cardiac mass QTL 880.042heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)227161361148295267Rat
12879843Am3Aortic mass QTL 30.016aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)227161361148295267Rat
12879844Kidm62Kidney mass QTL 620.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)227161361148295267Rat
9590095Sffal3Serum free fatty acids level QTL 36.780.001blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)22776030172760301Rat
1300160Hrtrt3Heart rate QTL 33.62heart pumping trait (VT:2000009)absolute change in heart rate (CMO:0000534)22872786752507805Rat
731179Mamtr3Mammary tumor resistance QTL 30.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)23122461243643900Rat
10755434Coatc7Coat color QTL 70.04794coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)23127237976272379Rat
61371Edpm1Estrogen-dependent pituitary mass QTL 140.05pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)23408817591101903Rat
10755436Coatc8Coat color QTL 80.02431coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)23513320280133202Rat
2306903Bp336Blood pressure QTL 3360.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)236245223112175725Rat
9685065Swd6Spike wave discharge measurement QTL 65.80.01brain electrophysiology trait (VT:0010557)brain spike-and-wave discharge rate (CMO:0001739)23899084849401197Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)240171834105089682Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)240171834105089682Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)240171834105089682Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)240171834105089682Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)240171834105089682Rat
12879863Bp402Blood pressure QTL 4020.003arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)24106343956736627Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Lnnr3

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
 



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.