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Gene: Tmem167a (transmembrane protein 167A) Rattus norvegicus

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Symbol:

Tmem167a

Name:

transmembrane protein 167A

RGD ID:

2323318

Description:

Predicted to be involved in constitutive secretory pathway; intracellular transport; and protein secretion. Predicted to be located in Golgi apparatus. Orthologous to human TMEM167A (transmembrane protein 167A); INTERACTS WITH aconitine; alpha-Zearalanol; bisphenol A.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC100359823; protein kish-A; rCG44733-like

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TMEM167A (transmembrane protein 167A)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther
Mus musculus (house mouse):	Tmem167 (transmembrane protein 167)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Tmem167a (transmembrane protein 167A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TMEM167A (transmembrane protein 167A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TMEM167A (transmembrane protein 167A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tmem167a (transmembrane protein 167A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TMEM167A (transmembrane protein 167A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TMEM167A (transmembrane protein 167A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tmem167a (transmembrane protein 167A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	CDKN3 (cyclin dependent kinase inhibitor 3)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	TMEM167A (transmembrane protein 167A)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Mus musculus (house mouse):	Tmem167 (transmembrane protein 167)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	tmem167a (transmembrane protein 167A)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	KSH1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	ksh	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	Y62E10A.2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	tmem167a	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	22,933,027 - 22,951,974 (+)	NCBI		GRCr8
mRatBN7.2	2	21,197,799 - 21,216,746 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	21,197,786 - 21,212,099 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	28,226,450 - 28,245,369 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	26,326,758 - 26,345,683 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	21,122,234 - 21,141,178 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	18,927,544 - 18,946,110 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	18,937,458 - 18,943,561 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	18,803,341 - 18,822,745 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	20,158,559 - 20,176,739 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	2	17,326,098 - 17,344,145 (+)	NCBI		Celera
Cytogenetic Map	2	q12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Neurodevelopmental Disorders (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

1,2-dimethylhydrazine (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

4-hydroxyphenyl retinamide (ISO)

aconitine (EXP)

acrolein (ISO)

aflatoxin B1 (ISO)

aflatoxin M1 (ISO)

all-trans-retinoic acid (ISO)

alpha-pinene (ISO)

alpha-Zearalanol (EXP)

benzo[a]pyrene (ISO)

bisphenol A (EXP)

cadmium dichloride (ISO)

carbon nanotube (ISO)

copper atom (ISO)

copper(0) (ISO)

copper(II) sulfate (ISO)

cyclosporin A (ISO)

cyproconazole (ISO)

decabromodiphenyl ether (EXP)

deguelin (ISO)

Dibutyl phosphate (ISO)

dicrotophos (ISO)

disulfiram (ISO)

doxorubicin (ISO)

epoxiconazole (ISO)

folic acid (ISO)

gentamycin (EXP)

hydrogen peroxide (ISO)

ivermectin (ISO)

methylmercury chloride (ISO)

miconazole (ISO)

ozone (ISO)

paracetamol (ISO)

perfluorooctanoic acid (EXP)

pirinixic acid (ISO)

potassium chromate (ISO)

propiconazole (ISO)

resveratrol (ISO)

silver atom (ISO)

silver(0) (ISO)

T-2 toxin (ISO)

temozolomide (ISO)

testosterone (ISO)

tetrachloromethane (EXP)

thioacetamide (EXP)

thiram (ISO)

titanium dioxide (ISO)

toluene (EXP)

triptonide (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

constitutive secretory pathway (ISO)

intracellular transport (IBA)

protein secretion (IBA)

Cellular Component

Golgi apparatus (ISO)

Golgi membrane (IEA)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:19942856

Genomics

Comparative Map Data

Tmem167a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	22,933,027 - 22,951,974 (+)	NCBI		GRCr8
mRatBN7.2	2	21,197,799 - 21,216,746 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	21,197,786 - 21,212,099 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	28,226,450 - 28,245,369 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	26,326,758 - 26,345,683 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	21,122,234 - 21,141,178 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	18,927,544 - 18,946,110 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	18,937,458 - 18,943,561 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	18,803,341 - 18,822,745 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	20,158,559 - 20,176,739 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	2	17,326,098 - 17,344,145 (+)	NCBI		Celera
Cytogenetic Map	2	q12	NCBI

TMEM167A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	83,052,846 - 83,077,394 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	83,052,846 - 83,077,863 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	5	82,348,665 - 82,373,213 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	82,387,742 - 82,408,935 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	5	78,253,269 - 78,277,876 (-)	NCBI		Celera
Cytogenetic Map	5	q14.2	NCBI
HuRef	5	77,557,054 - 77,581,656 (-)	NCBI		HuRef
CHM1_1	5	81,781,597 - 81,806,180 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	5	83,538,672 - 83,566,523 (-)	NCBI		T2T-CHM13v2.0

Tmem167
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	90,237,843 - 90,263,047 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	90,237,242 - 90,292,026 (+)	Ensembl		GRCm39 Ensembl
GRCm38	13	90,089,667 - 90,114,921 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	90,089,123 - 90,143,907 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	13	90,229,272 - 90,254,526 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	13	90,563,973 - 90,581,561 (+)	NCBI		MGSCv36	mm8
Celera	13	93,691,682 - 93,716,939 (+)	NCBI		Celera
Cytogenetic Map	13	C3	NCBI
cM Map	13	45.5	NCBI

Tmem167a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955418	27,426,354 - 27,444,845 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955418	27,426,354 - 27,444,845 (+)	NCBI	ChiLan1.0	ChiLan1.0

TMEM167A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	32,224,717 - 32,454,748 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	30,378,342 - 30,406,286 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	32,202,349 - 32,238,835 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	32,521,647 - 32,549,605 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	32,534,024 - 32,549,605 (+)	Ensembl	panpan1.1		panPan2

TMEM167A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	3	24,547,518 - 24,569,624 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	3	24,547,630 - 24,566,947 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	3	25,784,899 - 25,807,008 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	3	24,459,886 - 24,482,867 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	3	24,459,898 - 24,481,981 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	3	24,415,887 - 24,437,992 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	3	24,382,729 - 24,405,064 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	3	24,663,479 - 24,685,590 (+)	NCBI		UU_Cfam_GSD_1.0

Tmem167a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	180,377,465 - 180,399,765 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936469	2,229,423 - 2,248,256 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TMEM167A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	91,326,674 - 91,358,164 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	91,321,398 - 91,358,270 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	93,410,337 - 93,441,210 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TMEM167A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1 Ensembl	4	77,156,043 - 77,182,699 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666049	26,058,553 - 26,084,928 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tmem167a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624743	3,281,564 - 3,299,169 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624743	3,279,133 - 3,299,199 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Tmem167a
86 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	880
Count of miRNA genes:	312
Interacting mature miRNAs:	406
Transcripts:	ENSRNOT00000022366, ENSRNOT00000022377
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
10755430	Coatc6	Coat color QTL 6		0.02576	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	2	11591100	56591100	Rat
1600379	Mcs18	Mammary carcinoma susceptibility QTL 18	2.6		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	2	7887772	42804738	Rat
631682	Bp115	Blood pressure QTL 115	4.3	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	1	37410502	Rat
61355	Bp36	Blood pressure QTL 36	2.9		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	2	5873687	102844969	Rat
2300168	Bmd47	Bone mineral density QTL 47	6.6	0.0001	femur mineral mass (VT:0010011)	bone mineral density (CMO:0001226)	2	20662448	65662448	Rat
10755499	Bp389	Blood pressure QTL 389	2.61		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	18960362	228801039	Rat
1578664	Bmd9	Bone mineral QTL density 9	5		femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	2	11852062	49003364	Rat
738010	Lnnr3	Liver neoplastic nodule remodeling QTL 3	2.94		liver integrity trait (VT:0010547)	liver remodeling tumorous lesion number (CMO:0001461)	2	1	41244106	Rat
1357990	Ael1	Aortic elastin QTL 1	3.1	0.00091	aorta elastin amount (VT:0003905)	aortic elastin	2	19076825	64076825	Rat
731167	Glom4	Glomerulus QTL 4	2.4	0.0082	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)	2	20304672	65304672	Rat
738012	Anxrr3	Anxiety related response QTL 3	3.8		exploratory behavior trait (VT:0010471)	percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)	2	9023519	54023519	Rat
61368	Mcs1	Mammary carcinoma susceptibility QTL 1	4.4		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	2	7887772	23319447	Rat
731184	Mamtr4	Mammary tumor resistance QTL 4		0.0003	mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	2	16491740	61491740	Rat

Markers in Region

RH128864

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	21,216,528 - 21,216,719 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	18,946,824 - 18,947,014	NCBI	Rnor6.0
Rnor_5.0	2	18,822,604 - 18,822,794	UniSTS	Rnor5.0
RGSC_v3.4	2	20,177,018 - 20,177,208	UniSTS	RGSC3.4
Celera	2	17,344,859 - 17,345,049	UniSTS

RH143818

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	21,214,197 - 21,214,328 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	18,944,493 - 18,944,623	NCBI	Rnor6.0
Rnor_5.0	2	18,820,273 - 18,820,403	UniSTS	Rnor5.0
RGSC_v3.4	2	20,174,687 - 20,174,817	UniSTS	RGSC3.4
Celera	2	17,342,528 - 17,342,658	UniSTS

BI303647

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	21,195,901 - 21,196,021 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	18,925,682 - 18,925,801	NCBI	Rnor6.0
Rnor_5.0	2	18,801,462 - 18,801,581	UniSTS	Rnor5.0
RGSC_v3.4	2	20,156,675 - 20,156,794	UniSTS	RGSC3.4
Celera	2	17,324,236 - 17,324,355	UniSTS
Cytogenetic Map	2	q12	UniSTS

RH135270

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	21,215,646 - 21,215,846 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	18,945,942 - 18,946,141	NCBI	Rnor6.0
Rnor_5.0	2	18,821,722 - 18,821,921	UniSTS	Rnor5.0
RGSC_v3.4	2	20,176,136 - 20,176,335	UniSTS	RGSC3.4
Celera	2	17,343,977 - 17,344,176	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001399682	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_003753506	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	FQ212803	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ213661	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ214197	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ220007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ227014	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ234672	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000022377 ⟹ ENSRNOP00000022376

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	21,197,786 - 21,212,099 (+)	Ensembl
Rnor_6.0 Ensembl	2	18,937,458 - 18,943,561 (+)	Ensembl

RefSeq Acc Id:

NM_001399682 ⟹ NP_001386611

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	22,933,027 - 22,951,974 (+)	NCBI
mRatBN7.2	2	21,197,799 - 21,216,746 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001386611	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000022376.4
	ENSRNOP00000093488.1

Ensembl Acc Id:

ENSRNOP00000022376 ⟸ ENSRNOT00000022377

RefSeq Acc Id:	NP_001386611 ⟸ NM_001399682
- Peptide Label:	precursor
- UniProtKB:	A6I4N8 (UniProtKB/TrEMBL), A0A8I6AJY0 (UniProtKB/TrEMBL)

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZKR8-F1-model_v2	AlphaFold	D3ZKR8	1-71	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:2323318	AgrOrtholog
BioCyc Gene	G2FUF-54900	BioCyc
Ensembl Genes	ENSRNOG00000016686	Ensembl, UniProtKB/TrEMBL
	ENSRNOG00000062169	UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000022377.6	UniProtKB/TrEMBL
	ENSRNOT00000092839.2	UniProtKB/TrEMBL
InterPro	DUF1242	UniProtKB/TrEMBL
	KISH_domain	UniProtKB/TrEMBL
NCBI Gene	100359823	ENTREZGENE
PANTHER	PROTEIN KISH	UniProtKB/TrEMBL
	PROTEIN KISH-A	UniProtKB/TrEMBL
	PROTEIN KISH-A	UniProtKB/TrEMBL
Pfam	DUF1242	UniProtKB/TrEMBL
PhenoGen	Tmem167a	PhenoGen
RatGTEx	ENSRNOG00000016686	RatGTEx
	ENSRNOG00000062169	RatGTEx
UniProt	A0A8I6AJY0	ENTREZGENE, UniProtKB/TrEMBL
	A6I4N8	ENTREZGENE, UniProtKB/TrEMBL
	D3ZKR8_RAT	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2012-07-26	Tmem167a	transmembrane protein 167A	LOC100359823	rCG44733-like	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2010-05-06	LOC100359823	rCG44733-like			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar