Itgb3bp-ps1 (integrin subunit beta 3 binding protein, pseudogene 1) - Rat Genome Database

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Gene: Itgb3bp-ps1 (integrin subunit beta 3 binding protein, pseudogene 1) Rattus norvegicus
Analyze
Symbol: Itgb3bp-ps1
Name: integrin subunit beta 3 binding protein, pseudogene 1
RGD ID: 11364647
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: centromere protein R-like; LOC108350152
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr826,970,888 - 6,978,965 (+)NCBIGRCr8
mRatBN7.225,241,289 - 5,246,557 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.022,505,956 - 2,513,366 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Celera21,710,715 - 1,718,125 (+)NCBICelera
Cytogenetic Map2q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

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Variants in Itgb3bp-ps1
4 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631682Bp115Blood pressure QTL 1154.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2137410502Rat
738010Lnnr3Liver neoplastic nodule remodeling QTL 32.94liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)2141244106Rat


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XR_001836978
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.225,241,289 - 5,246,557 (+)NCBI
Rnor_6.022,505,956 - 2,513,366 (+)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-55094 BioCyc
NCBI Gene LOC108350152 ENTREZGENE
PhenoGen Itgb3bp-ps1 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Itgb3bp-ps1  integrin subunit beta 3 binding protein, pseudogene 1  LOC108350152  centromere protein R-like  Symbol and Name Changed 1299863 APPROVED
2016-08-02 LOC108350152  centromere protein R-like      Symbol and Name status set to provisional 70820 PROVISIONAL