BE119208 Marker Search Result - Rat Genome Database

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Marker: BE119208

Symbol: BE119208
Previously known as:
RGD ID: 5082353
Expected Size: 150 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.224,439,827 - 4,439,977 (-)MAPPERmRatBN7.2
Rnor_6.0291,452,619 - 91,452,768NCBIRnor6.0
Rnor_5.022,307,280 - 2,307,429UniSTSRnor5.0
Rnor_5.02111,213,560 - 111,213,709UniSTSRnor5.0
RGSC_v3.421,967,632 - 1,967,781UniSTSRGSC3.4
Celera2930,312 - 930,461UniSTS
Cytogenetic Map2q11-q12UniSTS
Is Marker For: Genes:   Pcsk1   LOC100911216  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer TGAAGGACATTATAATCACAGGAAGC
Reverse Primer CTGCAAGCACTCATGGACATTC
 

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
3272Pcsk1proprotein convertase subtilisin/kexin type 1243955434442434Rat



QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631682Bp115Blood pressure QTL 1154.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2137410502Rat
738010Lnnr3Liver neoplastic nodule remodeling QTL 32.94liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)2141244106Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene 100911216 UniSTS
  25204 UniSTS
UniSTS 249132 UniSTS