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Gene: Srek1 (splicing regulatory glutamic acid and lysine rich protein 1) Rattus norvegicus
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Symbol: Srek1
Name: splicing regulatory glutamic acid and lysine rich protein 1
Description: Predicted to have RNA binding activity. Predicted to be involved in RNA splicing; mRNA processing; and regulation of alternative mRNA splicing, via spliceosome. Predicted to localize to the nuclear speck. Orthologous to human SREK1 (splicing regulatory glutamic acid and lysine rich protein 1); INTERACTS WITH 2,4-dinitrotoluene; 2,6-dinitrotoluene; ammonium chloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: serine-arginine-rich splicing regulatory protein 86; serine-arginine-rich-splicing regulatory protein 86; serine/arginine-rich splicing factor 12; serine/arginine-rich-splicing regulatory protein 86; Sfrs12; splicing factor, arginine/serine-rich 12; splicing regulatory glutamic acid/lysine-rich protein 1; splicing regulatory glutamine/lysine-rich protein 1; SR-related protein of 86 kDa; Srrp86; Srsf12
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0233,806,035 - 33,841,594 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0252,935,275 - 52,970,575 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4234,690,996 - 34,710,132 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1234,611,364 - 34,630,501 (+)NCBI
Celera230,833,959 - 30,852,836 (-)NCBICelera
Cytogenetic Map2q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Srek1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 621696
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.