AU048029 Marker Search Result - Rat Genome Database

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Advanced Search (OLGA)

Marker: AU048029

Symbol: AU048029
Previously known as:
RGD ID: 5066992
Expected Size: 126 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.228,166,738 - 8,166,864 (+)MAPPERmRatBN7.2
Rnor_6.025,696,287 - 5,696,412NCBIRnor6.0
Rnor_5.025,673,189 - 5,673,314UniSTSRnor5.0
Celera24,601,789 - 4,601,924UniSTS
Is Marker For: Genes:   LOC100365886  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer TGGCTCAGTGAGGAAAGACA
Reverse Primer AAGATTGTATTCATCTCCCACCC
 

Region

Nucleotide Sequences
GenBank Nucleotide AU048029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
738010Lnnr3Liver neoplastic nodule remodeling QTL 32.94liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)2141244106Rat
1600379Mcs18Mammary carcinoma susceptibility QTL 182.6mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)2788777242804738Rat
731166Mamtr2Mammary tumor resistance QTL 20.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)2788777212654247Rat
61368Mcs1Mammary carcinoma susceptibility QTL 14.4mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)2788777223319447Rat
631682Bp115Blood pressure QTL 1154.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2137410502Rat
61355Bp36Blood pressure QTL 362.9blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)25873687102844969Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene 100365886 UniSTS