D2Rat1 Marker Search Result - Rat Genome Database

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Advanced Search (OLGA)

Marker: D2Rat1

Symbol: D2Rat1
Previously known as: oxsts6793; R045-B11; R0045-B11; 
RGD ID: 36912
Expected Size: 174 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2211,852,062 - 11,852,238 (+)MAPPERmRatBN7.2
Rnor_6.029,444,679 - 9,444,852NCBIRnor6.0
Rnor_5.029,324,722 - 9,324,895UniSTSRnor5.0
RGSC_v3.429,670,332 - 9,670,680RGDRGSC3.4
RGSC_v3.429,670,413 - 9,670,586UniSTSRGSC3.4
RGSC_v3.129,594,136 - 9,594,484RGD
Celera28,212,273 - 8,212,446UniSTS
RH 2.0 Map20.0RGD
SHRSP x BN Map20.0299RGD
FHH x ACI Map20.0899RGD
Cytogenetic Map2q11UniSTS
Is Marker For: Strains:   BBDP/Rhw   BBDR/Rhw   BC/CpbU   BDIX/Han   BDVII/Cub   BN/SsNHsd   BP/Cub   BUF/Pit   DA/PitN   DON/Melb   F344/Pit   FHH/Eur   IS/Kyo   LE/Mol   LEW/Pit   LH/Mav   MHS/Gib   MNRA/N   WN/N   WKY/OlaHsd   WTC/Kyo   LOU/CHan   MNR/N   MR/Pit   ODU/N   WF/Pit   WIST/Nhg   SR/Jr   MNS/Gib   NP9   OKA/Wsl   OM/Ztm   P5C   PVG/Pit   SD/Rij   SHR/OlaHsd   SHRSP/Riv   WAG/RijKyo   GK/KyoSwe   M520/N   ACI/N   BN-Lx/Cub   LN/Mav   GH/Omr   NEDH/K   SS/Jr   COP/OlaHsd  
QTLs:   Bmd9   Bmd10  
Genes:   Adgrv1  


Annotation



Strains and Sequence

Sequence
 
Forward Primer ATGTTCTCTAGCCGCCACAT
Reverse Primer AGAATCTGGTCACTGGGTGG
 
Template 
CCAGTGCCAAGCTTGCATGCCTGCAGGTCGACTCTAGAGGATCCCCCTGTTCCAAGCCCAGTGT
GGAATTTTCCTGCCACAGTCCCGAAATTATCCAGTTCTTTTGGAAGCCCTGATTTTAAGAAAGT
TATTTAATAAATAGAATCTGGTCACTGGGTGGTTATTGCTATTGCTGGTTATTGCCTTTTAATG
TGCACAGATTGGGAGTATATACACACACACATGGTTACTTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTNCTCACCCATGTATATGCATGTGGCGGCTAGAGAACATTGTTAG
ACGTCATCCTCTAGTGGTTTGTTCATGTTTTGTGAGGTAGGGTCTCTCATTGAACCTCATTCTT
GCAACTTCAGGGTACCGAGCTCGAATTCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTG
TTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAGCCTGGGGTGCTA
A

Region

Nucleotide Sequences
GenBank Nucleotide AC099304 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 100302820 UniSTS
  100303135 UniSTS
  100362255 UniSTS
  685383 UniSTS