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Gene: Scamp1 (secretory carrier membrane protein 1) Rattus norvegicus
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Symbol: Scamp1
Name: secretory carrier membrane protein 1
Description: Exhibits protein domain specific binding activity. Involved in endocytosis. Localizes to clathrin-coated vesicle and integral component of synaptic vesicle membrane. Orthologous to human SCAMP1 (secretory carrier membrane protein 1); INTERACTS WITH 17alpha-ethynylestradiol; 2,6-dinitrotoluene; 3H-1,2-dithiole-3-thione.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: SCAMP 37; secretory carrier-associated membrane protein 1
Orthologs:
Homo sapiens (human) : SCAMP1 (secretory carrier membrane protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Scamp1 (secretory carrier membrane protein 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Scamp1 (secretory carrier membrane protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SCAMP1 (secretory carrier membrane protein 1)
Canis lupus familiaris (dog) : SCAMP1 (secretory carrier membrane protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Scamp1 (secretory carrier membrane protein 1)
Sus scrofa (pig) : SCAMP1 (secretory carrier membrane protein 1)
Chlorocebus sabaeus (African green monkey) : SCAMP1 (secretory carrier membrane protein 1)
Heterocephalus glaber (naked mole-rat) : Scamp1 (secretory carrier membrane protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0223,858,021 - 23,941,128 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl223,857,995 - 23,941,084 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0243,029,910 - 43,112,204 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4224,495,965 - 24,586,869 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1224,417,965 - 24,507,158 (-)NCBI
Celera221,507,437 - 21,588,695 (-)NCBICelera
Cytogenetic Map2q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Scamp1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 3625
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.