Tbca (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 2 | 27,745,985 - 27,800,624 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 2 | 26,011,714 - 26,065,909 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 2 | 26,011,795 - 26,065,907 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 2 | 33,040,787 - 33,094,941 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 2 | 31,141,021 - 31,195,175 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 2 | 25,964,928 - 26,019,082 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 2 | 24,449,498 - 24,505,351 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 2 | 24,449,485 - 24,505,334 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 2 | 43,661,385 - 43,671,792 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | Celera | 2 | 22,083,636 - 22,136,709 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | q12 | NCBI | | | | |
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TBCA (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 5 | 77,691,166 - 77,776,339 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 5 | 77,691,166 - 77,868,780 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 5 | 76,986,991 - 77,072,163 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 5 | 77,022,751 - 77,107,941 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 5 | 77,022,828 - 77,107,886 | NCBI | | | | | Celera | 5 | 72,881,651 - 72,966,197 (-) | NCBI | | Celera | | | Cytogenetic Map | 5 | q14.1 | NCBI | | | | | HuRef | 5 | 72,194,090 - 72,279,072 (-) | NCBI | | HuRef | | | CHM1_1 | 5 | 76,421,166 - 76,506,343 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 5 | 78,173,750 - 78,258,323 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Tbca (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 13 | 94,925,428 - 94,979,431 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 13 | 94,925,418 - 94,979,430 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 13 | 94,788,920 - 94,842,923 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 13 | 94,788,910 - 94,842,922 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 13 | 95,558,898 - 95,612,854 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 13 | 95,889,642 - 95,943,598 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 13 | 98,402,227 - 98,458,103 (+) | NCBI | | Celera | | | Cytogenetic Map | 13 | C3 | NCBI | | | | | cM Map | 13 | 49.22 | NCBI | | | | |
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Tbca (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955425 | 23,300,480 - 23,313,497 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955425 | 23,301,457 - 23,312,740 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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TBCA (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 4 | 37,527,521 - 37,611,910 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 5 | 35,681,134 - 35,765,561 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 5 | 37,530,924 - 37,615,330 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 5 | 38,060,299 - 38,144,457 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 5 | 38,060,398 - 38,144,457 (+) | Ensembl | panpan1.1 | | panPan2 | |
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TBCA (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 3 | 28,972,469 - 29,027,436 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 3 | 28,910,025 - 29,025,297 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 3 | 30,189,342 - 30,265,020 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 3 | 28,873,151 - 28,948,560 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 3 | 28,873,170 - 28,954,090 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 3 | 28,807,711 - 28,882,941 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 3 | 28,785,816 - 28,861,651 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 3 | 29,116,567 - 29,192,256 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Tbca (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024407213 | 185,112,177 - 185,176,324 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936549 | 5,682,630 - 5,746,777 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936549 | 5,682,558 - 5,746,784 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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TBCA (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 2 | 86,579,835 - 86,665,163 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 2 | 86,581,603 - 86,664,994 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 2 | 88,189,131 - 88,273,262 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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TBCA (Chlorocebus sabaeus - green monkey) |
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Tbca (Heterocephalus glaber - naked mole-rat) |
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