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Gene: Ssbp2 (single-stranded DNA binding protein 2) Rattus norvegicus
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Symbol: Ssbp2
Name: single-stranded DNA binding protein 2
Description: Predicted to have single-stranded DNA binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to localize to the cytoplasm and nucleus. Orthologous to human SSBP2 (single stranded DNA binding protein 2); INTERACTS WITH 17beta-estradiol; 6-propyl-2-thiouracil; bisphenol A.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC361877; RGD1562968; similar to Single-stranded DNA-binding protein 2 (Sequence-specific single-stranded-DNA-binding protein 2); single-stranded DNA-binding protein 2
Orthologs:
Homo sapiens (human) : SSBP2 (single stranded DNA binding protein 2)  HGNC  Alliance
Mus musculus (house mouse) : Ssbp2 (single-stranded DNA binding protein 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ssbp2 (single stranded DNA binding protein 2)
Pan paniscus (bonobo/pygmy chimpanzee) : SSBP2 (single stranded DNA binding protein 2)
Canis lupus familiaris (dog) : SSBP2 (single stranded DNA binding protein 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ssbp2 (single stranded DNA binding protein 2)
Sus scrofa (pig) : SSBP2 (single stranded DNA binding protein 2)
Chlorocebus sabaeus (green monkey) : SSBP2 (single stranded DNA binding protein 2)
Heterocephalus glaber (naked mole-rat) : Ssbp2 (single stranded DNA binding protein 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0220,416,795 - 20,707,838 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl220,431,243 - 20,702,515 (+)Ensembl
Rnor_5.0220,291,256 - 20,579,015 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4221,651,784 - 21,926,781 (+)NCBIRGSC3.4rn4RGSC3.4
Celera218,764,608 - 19,037,384 (+)NCBICelera
Cytogenetic Map2q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ssbp2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1562968
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.