Mast4 (microtubule associated serine/threonine kinase family member 4) - Rat Genome Database

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Gene: Mast4 (microtubule associated serine/threonine kinase family member 4) Rattus norvegicus
Analyze
Symbol: Mast4
Name: microtubule associated serine/threonine kinase family member 4
RGD ID: 1310139
Description: Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in cytoskeleton organization and intracellular signal transduction. Predicted to be located in cytoplasm; INTERACTS WITH 17beta-estradiol; 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC310040; microtubule-associated serine/threonine-protein kinase 4; NEWGENE_1310139; RGD1310139; similar to KIAA0303
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2233,893,241 - 34,483,682 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl233,894,436 - 34,483,723 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0232,857,576 - 33,451,802 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl232,859,856 - 33,025,271 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl232,444,565 - 32,518,643 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0251,996,218 - 52,352,571 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.0251,582,787 - 51,662,296 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4233,648,515 - 34,242,153 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera229,878,176 - 30,467,200 (-)NCBICelera
Cytogenetic Map2q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (ISO)
17beta-estradiol  (EXP)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP)
2,3,7,8-Tetrachlorodibenzofuran  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
5-fluorouracil  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
antirheumatic drug  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
atrazine  (EXP)
benzo[a]pyrene  (ISO)
benzo[e]pyrene  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
butanal  (ISO)
cadmium dichloride  (ISO)
caffeine  (ISO)
calcitriol  (ISO)
CGP 52608  (ISO)
cisplatin  (ISO)
clobetasol  (ISO)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
crocidolite asbestos  (ISO)
cyclosporin A  (ISO)
dexamethasone  (ISO)
dibutyl phthalate  (ISO)
dicrotophos  (ISO)
dorsomorphin  (ISO)
Enterolactone  (ISO)
epoxiconazole  (ISO)
ethanol  (ISO)
fluoranthene  (ISO)
folic acid  (ISO)
formaldehyde  (ISO)
fulvestrant  (ISO)
gentamycin  (EXP)
glyphosate  (ISO)
hydrogen peroxide  (ISO)
indometacin  (ISO)
lead(0)  (ISO)
mercury dibromide  (ISO)
methapyrilene  (ISO)
methoxychlor  (EXP)
nitrofen  (EXP)
paracetamol  (EXP,ISO)
phenylmercury acetate  (ISO)
pirinixic acid  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (ISO)
sodium fluoride  (ISO)
sotorasib  (ISO)
testosterone  (ISO)
thioacetamide  (EXP)
trametinib  (ISO)
trichloroethene  (EXP)
triptonide  (ISO)
tungsten  (ISO)
tunicamycin  (ISO)
valproic acid  (EXP,ISO)
vancomycin  (ISO)
vinclozolin  (EXP)
vitamin E  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. GOA pipeline RGD automated data pipeline
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:18206861  


Genomics

Comparative Map Data
Mast4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2233,893,241 - 34,483,682 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl233,894,436 - 34,483,723 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0232,857,576 - 33,451,802 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl232,859,856 - 33,025,271 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl232,444,565 - 32,518,643 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0251,996,218 - 52,352,571 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.0251,582,787 - 51,662,296 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4233,648,515 - 34,242,153 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera229,878,176 - 30,467,200 (-)NCBICelera
Cytogenetic Map2q13NCBI
MAST4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38566,596,393 - 67,169,593 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl566,596,380 - 67,169,593 (+)EnsemblGRCh38hg38GRCh38
GRCh37565,892,221 - 66,465,421 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36565,927,932 - 66,498,848 (+)NCBINCBI36Build 36hg18NCBI36
Celera562,890,649 - 63,463,832 (+)NCBICelera
Cytogenetic Map5q12.3NCBI
HuRef562,849,136 - 63,424,533 (+)NCBIHuRef
CHM1_1565,892,076 - 66,465,814 (+)NCBICHM1_1
T2T-CHM13v2.0567,418,473 - 67,991,744 (+)NCBIT2T-CHM13v2.0
Mast4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3913102,868,996 - 103,471,607 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl13102,868,994 - 103,471,005 (-)EnsemblGRCm39 Ensembl
GRCm3813102,732,486 - 103,335,099 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl13102,732,486 - 103,334,497 (-)EnsemblGRCm38mm10GRCm38
MGSCv3713103,522,568 - 104,124,572 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3613103,852,872 - 104,455,486 (-)NCBIMGSCv36mm8
Celera13106,322,570 - 106,925,726 (-)NCBICelera
Cytogenetic Map13D1NCBI
cM Map1354.94NCBI
Mast4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554461,974,363 - 2,514,027 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554461,974,363 - 2,514,161 (-)NCBIChiLan1.0ChiLan1.0
MAST4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1544,900,733 - 45,483,305 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0546,827,595 - 47,414,708 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1548,394,433 - 48,829,645 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl548,396,973 - 48,970,233 (-)Ensemblpanpan1.1panPan2
MAST4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1252,241,621 - 52,633,192 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl252,185,407 - 52,633,243 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha249,060,227 - 49,597,951 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0252,591,450 - 53,135,914 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl252,591,158 - 53,133,614 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1249,656,736 - 50,200,538 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0250,444,848 - 50,983,150 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0251,332,587 - 51,871,159 (+)NCBIUU_Cfam_GSD_1.0
Mast4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213193,209,037 - 193,760,397 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364802,145,495 - 2,696,582 (-)EnsemblSpeTri2.0
SpeTri2.0NW_0049364802,145,515 - 2,307,842 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MAST4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1645,383,207 - 45,561,352 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11644,972,519 - 45,562,100 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21649,238,295 - 49,280,859 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MAST4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1462,774,274 - 63,349,714 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl463,181,153 - 63,349,709 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604911,429,491 - 12,009,589 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mast4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248152,539,785 - 3,139,696 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248152,539,867 - 3,139,943 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Mast4
4282 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:93
Count of miRNA genes:83
Interacting mature miRNAs:89
Transcripts:ENSRNOT00000061024, ENSRNOT00000074941
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631682Bp115Blood pressure QTL 1154.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2137410502Rat
738010Lnnr3Liver neoplastic nodule remodeling QTL 32.94liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)2141244106Rat
61355Bp36Blood pressure QTL 362.9blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)25873687102844969Rat
1600379Mcs18Mammary carcinoma susceptibility QTL 182.6mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)2788777242804738Rat
738012Anxrr3Anxiety related response QTL 33.8exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)2902351954023519Rat
10755430Coatc6Coat color QTL 60.02576coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)21159110056591100Rat
1578664Bmd9Bone mineral QTL density 95femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)21185206249003364Rat
731184Mamtr4Mammary tumor resistance QTL 40.0003mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)21649174061491740Rat
1357990Ael1Aortic elastin QTL 13.10.00091aorta elastin amount (VT:0003905)aortic elastin21907682564076825Rat
731167Glom4Glomerulus QTL 42.40.0082kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)22030467265304672Rat
2300168Bmd47Bone mineral density QTL 476.60.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)22066244865662448Rat
10402051Gdil2Gastrointestinal dilation QTL 2enteric ganglion morphology trait (VT:0001045)length of intestine affected by colonic aganglionosis to total length of colon ratio (CMO:0001836)22490385374786777Rat
1302794Stl27Serum triglyceride level QTL 274.40.0001blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)225413423143657569Rat
1358894Kidm24Kidney mass QTL 244.03kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358899Kidm23Kidney mass QTL 233.88kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358901Cm38Cardiac mass QTL 382heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423157142209Rat
1358904Cm39Cardiac mass QTL 392.26heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423157142209Rat
1358910Kidm27Kidney mass QTL 275.77kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358911Kidm28Kidney mass QTL 285.42kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358913Cm41Cardiac mass QTL 412.73heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423203928301Rat
1358917Cm42Cardiac mass QTL 422.82heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423203928301Rat
1358887Bw50Body weight QTL 502.39body mass (VT:0001259)body weight (CMO:0000012)225413652157142078Rat
1358908Bw49Body weight QTL 493.36body mass (VT:0001259)body weight (CMO:0000012)225413652157142078Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)22691781781754745Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)22691781781754745Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)22691781781754745Rat
1354603Bp243Blood pressure QTL 2433.9arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)226917817127469484Rat
2290453Scl55Serum cholesterol level QTL 552.83blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)226917817136917119Rat
1331764Bp205Blood pressure QTL 2053.476arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)22699957143154682Rat
1643006Pain1Pain QTL 13.630.005mechanical nociception trait (VT:0002734)self mutilation severity score (CMO:0002145)22699957148268661Rat
9590095Sffal3Serum free fatty acids level QTL 36.780.001blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)22715716072157160Rat
1300160Hrtrt3Heart rate QTL 33.62heart pumping trait (VT:2000009)absolute change in heart rate (CMO:0000534)22997159351729300Rat
10755434Coatc7Coat color QTL 70.04794coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)23064806575648065Rat
731179Mamtr3Mammary tumor resistance QTL 30.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)23237377043665178Rat

Markers in Region
D2Rat116  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2234,091,039 - 34,091,161 (+)MAPPERmRatBN7.2
Rnor_6.0233,055,215 - 33,055,336NCBIRnor6.0
Rnor_5.0252,191,413 - 52,191,534UniSTSRnor5.0
RGSC_v3.4233,845,499 - 33,845,620UniSTSRGSC3.4
RGSC_v3.4233,845,498 - 33,845,620RGDRGSC3.4
RGSC_v3.1233,765,868 - 33,765,989RGD
Celera230,074,386 - 30,074,507UniSTS
RH 3.4 Map2133.7RGD
RH 3.4 Map2133.7UniSTS
RH 2.0 Map2205.7RGD
SHRSP x BN Map212.7498RGD
FHH x ACI Map221.9699RGD
Cytogenetic Map2q12UniSTS
D2Rat195  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2234,203,012 - 34,203,179 (+)MAPPERmRatBN7.2
Rnor_6.0233,167,310 - 33,167,474NCBIRnor6.0
Rnor_5.0252,303,450 - 52,303,614UniSTSRnor5.0
RGSC_v3.4233,957,192 - 33,957,523RGDRGSC3.4
RGSC_v3.4233,957,358 - 33,957,522UniSTSRGSC3.4
RGSC_v3.1233,877,727 - 33,877,891RGD
RH 3.4 Map2119.3RGD
RH 3.4 Map2119.3UniSTS
RH 2.0 Map2205.9RGD
SHRSP x BN Map213.8798RGD
Cytogenetic Map2q12UniSTS
D2Got11  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2234,084,342 - 34,084,616 (+)MAPPERmRatBN7.2
Rnor_6.0233,048,518 - 33,048,791NCBIRnor6.0
Rnor_5.0252,184,716 - 52,184,989UniSTSRnor5.0
RGSC_v3.4233,838,802 - 33,839,075UniSTSRGSC3.4
RGSC_v3.4233,838,802 - 33,839,075RGDRGSC3.4
RGSC_v3.1233,759,170 - 33,759,444RGD
Celera230,067,660 - 30,067,949UniSTS
RH 3.4 Map2120.4UniSTS
RH 3.4 Map2120.4RGD
Cytogenetic Map2q12UniSTS
RH143098  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2234,095,797 - 34,096,004 (+)MAPPERmRatBN7.2
Rnor_6.0233,059,977 - 33,060,183NCBIRnor6.0
Rnor_5.0252,196,175 - 52,196,381UniSTSRnor5.0
RGSC_v3.4233,850,261 - 33,850,467UniSTSRGSC3.4
Celera230,079,148 - 30,079,354UniSTS
RH 3.4 Map2119.3UniSTS
Cytogenetic Map2q12UniSTS
RH144346  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2234,477,133 - 34,477,346 (+)MAPPERmRatBN7.2
Rnor_6.0233,445,338 - 33,445,550NCBIRnor6.0
Rnor_5.0252,577,071 - 52,577,283UniSTSRnor5.0
RGSC_v3.4234,235,771 - 34,235,983UniSTSRGSC3.4
Celera230,460,744 - 30,460,956UniSTS
RH 3.4 Map2129.6UniSTS
Cytogenetic Map2q12UniSTS
AI178590  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2233,955,532 - 33,955,646 (+)MAPPERmRatBN7.2
Rnor_6.0232,919,863 - 32,919,976NCBIRnor6.0
Rnor_6.0232,504,572 - 32,504,685NCBIRnor6.0
Rnor_5.0252,058,505 - 52,058,618UniSTSRnor5.0
Rnor_5.0251,645,074 - 51,645,187UniSTSRnor5.0
RGSC_v3.4233,708,323 - 33,708,436UniSTSRGSC3.4
Celera229,940,428 - 29,940,541UniSTS
RH 3.4 Map2131.7UniSTS
Cytogenetic Map2q12UniSTS
RH142670  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2234,320,625 - 34,320,725 (+)MAPPERmRatBN7.2
Rnor_6.0233,285,474 - 33,285,573NCBIRnor6.0
Rnor_5.0252,421,474 - 52,421,573UniSTSRnor5.0
RGSC_v3.4234,078,579 - 34,078,678UniSTSRGSC3.4
Celera230,305,092 - 30,305,191UniSTS
RH 3.4 Map2126.1UniSTS
Cytogenetic Map2q12UniSTS
RH142694  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2484,177,684 - 84,177,785 (+)MAPPERmRatBN7.2
mRatBN7.2234,201,033 - 34,201,134 (+)MAPPERmRatBN7.2
Rnor_6.0233,165,333 - 33,165,433NCBIRnor6.0
Rnor_6.0485,241,212 - 85,241,312NCBIRnor6.0
Rnor_5.0252,301,473 - 52,301,573UniSTSRnor5.0
Rnor_5.04149,898,456 - 149,898,556UniSTSRnor5.0
Celera479,044,993 - 79,045,093UniSTS
Celera230,185,400 - 30,185,500UniSTS
RH 3.4 Map1819.5UniSTS
Cytogenetic Map2q12UniSTS
Cytogenetic Map4q24UniSTS
BF386598  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2234,126,717 - 34,126,903 (+)MAPPERmRatBN7.2
Rnor_6.0233,091,067 - 33,091,252NCBIRnor6.0
Rnor_5.0252,227,265 - 52,227,450UniSTSRnor5.0
RGSC_v3.4233,881,180 - 33,881,365UniSTSRGSC3.4
Celera230,109,996 - 30,110,181UniSTS
RH 3.4 Map2130.7UniSTS
Cytogenetic Map2q12UniSTS
RH139944  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2233,893,259 - 33,893,476 (+)MAPPERmRatBN7.2
Rnor_6.0232,857,595 - 32,857,811NCBIRnor6.0
Rnor_6.0232,442,304 - 32,442,520NCBIRnor6.0
Rnor_5.0251,996,237 - 51,996,453UniSTSRnor5.0
Rnor_5.0251,582,806 - 51,583,022UniSTSRnor5.0
RGSC_v3.4233,646,055 - 33,646,271UniSTSRGSC3.4
Celera229,878,195 - 29,878,411UniSTS
RH 3.4 Map2136.0UniSTS
Cytogenetic Map2q12UniSTS
BE096959  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2234,250,074 - 34,250,224 (+)MAPPERmRatBN7.2
Rnor_6.0233,214,580 - 33,214,729NCBIRnor6.0
Rnor_5.0252,349,828 - 52,349,977UniSTSRnor5.0
RGSC_v3.4234,008,031 - 34,008,180UniSTSRGSC3.4
Celera230,234,579 - 30,234,728UniSTS
RH 3.4 Map2127.9UniSTS
Cytogenetic Map2q12UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium
Low 1 33 13 3 11 3 7 7 54 22 22 11 7
Below cutoff 2 10 34 22 10 22 1 4 23 14 26 4 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001421273 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008760704 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008760705 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008775057 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008775058 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017591364 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017591403 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017591405 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017591408 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017591409 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017591410 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017597263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017597265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017597266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017597268 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017597273 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017597277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017597278 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017597280 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039103957 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039103958 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039103959 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039103960 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039103961 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039103962 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039103963 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JACYVU010000065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSRNOT00000061032   ⟹   ENSRNOP00000057748
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl233,894,436 - 34,252,792 (-)Ensembl
Rnor_6.0 Ensembl232,444,565 - 32,518,643 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000074941   ⟹   ENSRNOP00000063928
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl233,894,436 - 34,061,207 (-)Ensembl
Rnor_6.0 Ensembl232,859,856 - 33,025,271 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000099238   ⟹   ENSRNOP00000084566
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl233,894,436 - 34,252,862 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000105995   ⟹   ENSRNOP00000091893
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl234,162,589 - 34,483,723 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000106636   ⟹   ENSRNOP00000081279
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl234,291,782 - 34,483,723 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000117246   ⟹   ENSRNOP00000076764
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl233,894,436 - 34,113,382 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000117433   ⟹   ENSRNOP00000087068
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl234,162,329 - 34,483,723 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000117686   ⟹   ENSRNOP00000097115
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl233,894,436 - 34,483,723 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000117830   ⟹   ENSRNOP00000086736
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl233,894,436 - 34,483,723 (-)Ensembl
RefSeq Acc Id: NM_001421273   ⟹   NP_001408202
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2233,893,241 - 34,483,682 (-)NCBI
RefSeq Acc Id: XM_008760704   ⟹   XP_008758926
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2233,893,241 - 34,060,896 (-)NCBI
RefSeq Acc Id: XM_008760705   ⟹   XP_008758927
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2233,893,241 - 34,060,896 (-)NCBI
RefSeq Acc Id: XM_017591403   ⟹   XP_017446892
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2233,893,241 - 34,483,600 (-)NCBI
RefSeq Acc Id: XM_017591405   ⟹   XP_017446894
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2233,893,241 - 34,483,600 (-)NCBI
RefSeq Acc Id: XM_017591408   ⟹   XP_017446897
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2233,893,241 - 34,252,808 (-)NCBI
RefSeq Acc Id: XM_017591409   ⟹   XP_017446898
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2233,893,241 - 34,064,770 (-)NCBI
RefSeq Acc Id: XM_017591410   ⟹   XP_017446899
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2233,893,241 - 34,252,794 (-)NCBI
RefSeq Acc Id: XM_039103957   ⟹   XP_038959885
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2233,893,241 - 34,483,600 (-)NCBI
RefSeq Acc Id: XM_039103958   ⟹   XP_038959886
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2233,893,241 - 34,483,600 (-)NCBI
RefSeq Acc Id: XM_039103959   ⟹   XP_038959887
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2233,893,241 - 34,483,600 (-)NCBI
RefSeq Acc Id: XM_039103960   ⟹   XP_038959888
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2233,893,241 - 34,120,901 (-)NCBI
RefSeq Acc Id: XM_039103961   ⟹   XP_038959889
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2233,893,241 - 34,079,752 (-)NCBI
RefSeq Acc Id: XM_039103962   ⟹   XP_038959890
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2233,893,241 - 34,049,682 (-)NCBI
RefSeq Acc Id: XM_039103963   ⟹   XP_038959891
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2233,893,241 - 34,050,476 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: ENSRNOP00000057748   ⟸   ENSRNOT00000061032
RefSeq Acc Id: ENSRNOP00000063928   ⟸   ENSRNOT00000074941
RefSeq Acc Id: ENSRNOP00000084566   ⟸   ENSRNOT00000099238
RefSeq Acc Id: ENSRNOP00000076764   ⟸   ENSRNOT00000117246
RefSeq Acc Id: ENSRNOP00000086736   ⟸   ENSRNOT00000117830
RefSeq Acc Id: ENSRNOP00000091893   ⟸   ENSRNOT00000105995
RefSeq Acc Id: ENSRNOP00000081279   ⟸   ENSRNOT00000106636
RefSeq Acc Id: ENSRNOP00000097115   ⟸   ENSRNOT00000117686
RefSeq Acc Id: ENSRNOP00000087068   ⟸   ENSRNOT00000117433
RefSeq Acc Id: XP_038959887   ⟸   XM_039103959
- Peptide Label: isoform X5
- UniProtKB: A0A8I6GEC4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038959886   ⟸   XM_039103958
- Peptide Label: isoform X4
- UniProtKB: A0A8I6GEC4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_017446894   ⟸   XM_017591405
- Peptide Label: isoform X3
- UniProtKB: A0A8I6GEC4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017446892   ⟸   XM_017591403
- Peptide Label: isoform X2
- UniProtKB: A0A8I6GEC4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_038959885   ⟸   XM_039103957
- Peptide Label: isoform X1
- UniProtKB: A0A8I6GEC4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_017446897   ⟸   XM_017591408
- Peptide Label: isoform X8
- UniProtKB: F1M4F3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017446899   ⟸   XM_017591410
- Peptide Label: isoform X11
- UniProtKB: F1M4F3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_038959888   ⟸   XM_039103960
- Peptide Label: isoform X7
- UniProtKB: A0A8I5Y716 (UniProtKB/TrEMBL),   F1M4F3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038959889   ⟸   XM_039103961
- Peptide Label: isoform X12
- UniProtKB: F1M4F3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_017446898   ⟸   XM_017591409
- Peptide Label: isoform X9
- UniProtKB: F1M4F3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008758927   ⟸   XM_008760705
- Peptide Label: isoform X15
- UniProtKB: F1M4F3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008758926   ⟸   XM_008760704
- Peptide Label: isoform X10
- UniProtKB: M0R3L1 (UniProtKB/TrEMBL),   F1M4F3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_038959891   ⟸   XM_039103963
- Peptide Label: isoform X14
- UniProtKB: F1M4F3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038959890   ⟸   XM_039103962
- Peptide Label: isoform X13
- UniProtKB: F1M4F3 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001408202   ⟸   NM_001421273
- UniProtKB: A0A8I6AUJ4 (UniProtKB/TrEMBL),   A0A8I6GEC4 (UniProtKB/TrEMBL)
Protein Domains
AGC-kinase C-terminal   PDZ   Protein kinase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-M0R3L1-F1-model_v2 AlphaFold M0R3L1 1-2425 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSRNOG00000010720 Ensembl
  ENSRNOG00000027002 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000057748 ENTREZGENE
  ENSRNOP00000057748.5 UniProtKB/TrEMBL
  ENSRNOP00000063928 ENTREZGENE
  ENSRNOP00000063928.2 UniProtKB/TrEMBL
  ENSRNOP00000076764 ENTREZGENE
  ENSRNOP00000076764.1 UniProtKB/TrEMBL
  ENSRNOP00000081279.1 UniProtKB/TrEMBL
  ENSRNOP00000084566 ENTREZGENE
  ENSRNOP00000084566.1 UniProtKB/TrEMBL
  ENSRNOP00000086736 ENTREZGENE
  ENSRNOP00000086736.1 UniProtKB/TrEMBL
  ENSRNOP00000087068.1 UniProtKB/TrEMBL
  ENSRNOP00000091893.1 UniProtKB/TrEMBL
  ENSRNOP00000097115 ENTREZGENE
  ENSRNOP00000097115.1 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000061032 ENTREZGENE
  ENSRNOT00000061032.5 UniProtKB/TrEMBL
  ENSRNOT00000074941 ENTREZGENE
  ENSRNOT00000074941.3 UniProtKB/TrEMBL
  ENSRNOT00000099238 ENTREZGENE
  ENSRNOT00000099238.1 UniProtKB/TrEMBL
  ENSRNOT00000105995.1 UniProtKB/TrEMBL
  ENSRNOT00000106636.1 UniProtKB/TrEMBL
  ENSRNOT00000117246 ENTREZGENE
  ENSRNOT00000117246.1 UniProtKB/TrEMBL
  ENSRNOT00000117433.1 UniProtKB/TrEMBL
  ENSRNOT00000117686 ENTREZGENE
  ENSRNOT00000117686.1 UniProtKB/TrEMBL
  ENSRNOT00000117830 ENTREZGENE
  ENSRNOT00000117830.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.1480.20 UniProtKB/TrEMBL
  2.30.42.10 UniProtKB/TrEMBL
  Transferase(Phosphotransferase) domain 1 UniProtKB/TrEMBL
InterPro AGC-kinase_C UniProtKB/TrEMBL
  Kinase-like_dom UniProtKB/TrEMBL
  MA_Ser/Thr_Kinase_dom UniProtKB/TrEMBL
  MAST UniProtKB/TrEMBL
  MAST_pre-PK_dom UniProtKB/TrEMBL
  PDZ UniProtKB/TrEMBL
  PDZ_6 UniProtKB/TrEMBL
  PDZ_sf UniProtKB/TrEMBL
  Peptidase_M50 UniProtKB/TrEMBL
  Prot_kinase_cat_dom UniProtKB/TrEMBL
  Ser/Thr_kinase_AS UniProtKB/TrEMBL
KEGG Report rno:103690045 UniProtKB/TrEMBL
NCBI Gene Mast4 ENTREZGENE
PANTHER MICROTUBULE-ASSOCIATED SERINE/THREONINE-PROTEIN KINASE 4 UniProtKB/TrEMBL
  SERINE/THREONINE-PROTEIN KINASE UniProtKB/TrEMBL
Pfam DUF1908 UniProtKB/TrEMBL
  PDZ_6 UniProtKB/TrEMBL
  Peptidase_M50 UniProtKB/TrEMBL
  Pkinase UniProtKB/TrEMBL
PhenoGen Mast4 PhenoGen
PROSITE AGC_KINASE_CTER UniProtKB/TrEMBL
  PDZ UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/TrEMBL
SMART PDZ UniProtKB/TrEMBL
  S_TKc UniProtKB/TrEMBL
Superfamily-SCOP Kinase_like UniProtKB/TrEMBL
  PDZ UniProtKB/TrEMBL
  SSF140482 UniProtKB/TrEMBL
UniProt A0A8I5Y716 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZUQ7_RAT UniProtKB/TrEMBL
  A0A8I6A2A1_RAT UniProtKB/TrEMBL
  A0A8I6A7S0_RAT UniProtKB/TrEMBL
  A0A8I6AG41_RAT UniProtKB/TrEMBL
  A0A8I6AUJ4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6GEC4 ENTREZGENE, UniProtKB/TrEMBL
  F1M4F3 ENTREZGENE, UniProtKB/TrEMBL
  M0R3L1 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 Mast4  microtubule associated serine/threonine kinase family member 4  NEWGENE_1310139  microtubule associated serine/threonine kinase family member 4  Data Merged 737654 PROVISIONAL
2014-08-25 NEWGENE_1310139  microtubule associated serine/threonine kinase family member 4      Symbol and Name status set to provisional 70820 PROVISIONAL
2008-02-27 Mast4  microtubule associated serine/threonine kinase family member 4  RGD1310139_predicted  similar to KIAA0303 (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-01-20 RGD1310139_predicted  similar to KIAA0303 (predicted)  LOC310040_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC310040_predicted  similar to KIAA0303 (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL