Eef1a1-ps7 (eukaryotic translation elongation factor 1 alpha 1, pseudogene 7) - Rat Genome Database

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Gene: Eef1a1-ps7 (eukaryotic translation elongation factor 1 alpha 1, pseudogene 7) Rattus norvegicus
Analyze
Symbol: Eef1a1-ps7
Name: eukaryotic translation elongation factor 1 alpha 1, pseudogene 7
RGD ID: 1588877
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: LOC688411; similar to eukaryotic translation elongation factor 1 alpha 2
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8222,357,554 - 22,359,224 (-)NCBIGRCr8
mRatBN7.2220,622,397 - 20,623,912 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.0218,345,300 - 18,346,828 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0218,220,703 - 18,222,210 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4219,566,841 - 19,568,305 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera216,765,409 - 16,766,937 (-)NCBICelera
Cytogenetic Map2q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Eef1a1-ps7
23 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631682Bp115Blood pressure QTL 1154.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2137410502Rat
738010Lnnr3Liver neoplastic nodule remodeling QTL 32.94liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)2141244106Rat
61355Bp36Blood pressure QTL 362.9blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)25873687102844969Rat
61368Mcs1Mammary carcinoma susceptibility QTL 14.4mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)2788777223319447Rat
1600379Mcs18Mammary carcinoma susceptibility QTL 182.6mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)2788777242804738Rat
738012Anxrr3Anxiety related response QTL 33.8exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)2902351954023519Rat
10755430Coatc6Coat color QTL 60.02576coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)21159110056591100Rat
1578664Bmd9Bone mineral QTL density 95femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)21185206249003364Rat
731184Mamtr4Mammary tumor resistance QTL 40.0003mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)21649174061491740Rat
1357990Ael1Aortic elastin QTL 13.10.00091aorta elastin amount (VT:0003905)aortic elastin21907682564076825Rat
731167Glom4Glomerulus QTL 42.40.0082kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)22030467265304672Rat

Markers in Region
PMC26240P1   No map positions available.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XR_086160
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_5.0218,220,791 - 18,222,166 (-)NCBI
RGSC_v3.4219,566,841 - 19,568,305 (-)RGD
RefSeq Acc Id: XR_146811
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera216,765,518 - 16,766,893 (-)NCBI

Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-54905 BioCyc
NCBI Gene 688411 ENTREZGENE
PhenoGen Eef1a1-ps7 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Eef1a1-ps7  eukaryotic translation elongation factor 1 alpha 1, pseudogene 7  LOC688411  similar to eukaryotic translation elongation factor 1 alpha 2  Symbol and Name Changed 1299863 APPROVED
2013-05-24 LOC688411  similar to eukaryotic translation elongation factor 1 alpha 2  LOC100363748  eukaryotic translation elongation factor 1 alpha 1-like  Data merged from RGD:2322403 1643240 APPROVED
2010-05-06 LOC100363748  eukaryotic translation elongation factor 1 alpha 1-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2008-01-09 LOC688411  similar to eukaryotic translation elongation factor 1 alpha 2  LOC683079  similar to eukaryotic translation elongation factor 1 alpha 2  Data merged from RGD:1591530 1643240 APPROVED
2006-11-20 LOC683079  similar to eukaryotic translation elongation factor 1 alpha 2      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-19 LOC688411  similar to eukaryotic translation elongation factor 1 alpha 2      Symbol and Name status set to provisional 70820 PROVISIONAL