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Gene: Pdlim5 (PDZ and LIM domain 5) Rattus norvegicus
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Symbol: Pdlim5
Name: PDZ and LIM domain 5
Description: Exhibits cytoskeletal protein binding activity; protein N-terminus binding activity; and protein kinase C binding activity. Involved in cell growth involved in cardiac muscle cell development; regulation of dendritic spine morphogenesis; and regulation of synapse assembly. Localizes to the cytosol; membrane; and postsynaptic density. Orthologous to human PDLIM5 (PDZ and LIM domain 5); INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Enh; Enh1; enigma homolog; enigma-like PDZ and LIM domains protein; PDZ and LIM domain protein 5
Orthologs:
Homo sapiens (human) : PDLIM5 (PDZ and LIM domain 5)  HGNC  Alliance
Mus musculus (house mouse) : Pdlim5 (PDZ and LIM domain 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pdlim5 (PDZ and LIM domain 5)
Pan paniscus (bonobo/pygmy chimpanzee) : PDLIM5 (PDZ and LIM domain 5)
Canis lupus familiaris (dog) : PDLIM5 (PDZ and LIM domain 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pdlim5 (PDZ and LIM domain 5)
Sus scrofa (pig) : PDLIM5 (PDZ and LIM domain 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: suggests misassembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02247,815,214 - 247,989,198 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02266,345,722 - 266,518,817 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42240,177,301 - 240,304,192 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12240,164,042 - 240,283,654 (-)NCBI
Celera2223,009,335 - 223,173,420 (-)NCBICelera
Cytogenetic Map2q44NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Pdlim5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 621076
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.