Advanced Search (OLGA)

QTL Registration

General

QTL: Bw132 (Body weight QTL 132) Rattus norvegicus

Symbol:

Bw132

Name:

Body weight QTL 132

RGD ID:

7411555

Trait:

body mass (VT:0001259)

Measurement Type:

body weight gain (CMO:0000420)

LOD Score:

Not Available

P Value:

0.001

Variance:

Not Available

Position

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	223,389,739 - 249,053,267	RGD_MAPPER_PIPELINE	mRatBN7.2
Rnor_6.0	2	240,679,103 - 266,435,125	RGD_MAPPER_PIPELINE	Rnor6.0
Rnor_5.0	2	259,350,386 - 285,068,071	RGD_MAPPER_PIPELINE	Rnor5.0
RGSC_v3.4	2	232,433,276 - 258,207,540	RGD_MAPPER_PIPELINE	RGSC3.4

Cross Type:

intercross

Strains Crossed:

F344/IcoCrlf LOU/NimrOlaHsd

Annotation Click to see Annotation Detail View

Candidate Gene Status

Acacb is a candidate Gene for Bw132

Disease Annotations Click to see Annotation Detail View

Body Weight (IAGP)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

increased body weight (IDA)

Experimental Data Annotations Click to see Annotation Detail View

Clinical Measurement

body weight gain (IDA)

Experimental Condition

control condition (IDA)

Measurement Method

body weighing method (IDA)

Vertebrate Trait

body mass (IDA)

Rat Strain

F344/IcoCrlf (IEA)

LOU/NimrOlaHsd (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	QTLs influencing carbohydrate and fat choice in a LOU/CxFischer 344 F2 rat population.	Marissal-Arvy N, etal., Obesity (Silver Spring). 2013 Apr 17. doi: 10.1002/oby.20485.

Region

Markers in Region

The following Markers overlap with this region.

RGD ID

Symbol

Expected Size

Chr

Start

Stop

Species

Match

Position Markers

Peak: (D2Rat70)

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	2	245,889,653 - 245,889,826 (+)	MAPPER
Rnor_6.0	2	263,179,018 - 263,179,188	NCBI
Rnor_5.0	2	281,850,301 - 281,850,471	UniSTS
RGSC_v3.4	2	254,933,192 - 254,933,362	UniSTS
RGSC_v3.4	2	254,933,191 - 254,933,362	RGD
Celera	2	237,707,980 - 237,708,150	UniSTS
RGSC_v3.1	2	254,947,787 - 254,948,141	RGD
RH 3.4 Map	2	1633.1	RGD
RH 3.4 Map	2	1633.1	UniSTS
RH 2.0 Map	2	1203.5	RGD
SHRSP x BN Map	2	112.4798	RGD
FHH x ACI Map	2	113.0199	RGD
Cytogenetic Map	2	q45	UniSTS

Additional Information

RGD Curation Notes

Note Type	Note	Reference
qtl_cross_type	intercross	7401255
qtl_general	weight gain is correlated to the total calorie intake	7401255
qtl_general	software package used: multiple interval mapping (MIM); MultiQTL software (version 2.6); ANOVA	7401255
qtl_general	measurement method: At 16 weeks of age animals were individually housed and given self-selection diet (protein, carbohydrate and fat diet in three separate cups); rats were weighed 3 times per week for 3 weeks	7401255
qtl_general	number of animals used: 94 F₂ females	7401255
qtl_map	spans from 249.4-258.2 Mb; peak at 258.2 Mb	7401255

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Create Name:

Description:

Send us a Message

QTL: Bw132 (Body weight QTL 132) Rattus norvegicus

Mammalian Phenotype