Pdlim5 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405301 | 24,194,484 - 24,421,688 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936687 | 1,944,095 - 2,152,529 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936687 | 1,944,095 - 2,152,501 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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PDLIM5 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 4 | 94,451,942 - 94,668,223 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 4 | 94,451,857 - 94,668,227 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 4 | 95,373,093 - 95,589,374 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 4 | 95,592,061 - 95,808,400 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 4 | 95,730,215 - 95,946,554 | NCBI | | | | | Celera | 4 | 92,670,285 - 92,886,273 (+) | NCBI | | Celera | | | Cytogenetic Map | 4 | q22.3 | NCBI | | | | | HuRef | 4 | 91,110,743 - 91,326,816 (+) | NCBI | | HuRef | | | CHM1_1 | 4 | 95,350,391 - 95,566,419 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 4 | 97,767,448 - 97,983,384 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Pdlim5 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 3 | 141,945,346 - 142,101,480 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 3 | 141,945,351 - 142,101,454 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 3 | 142,239,585 - 142,395,719 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 3 | 142,239,590 - 142,395,696 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 3 | 141,903,568 - 142,058,630 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 3 | 142,180,044 - 142,333,004 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 3 | 148,660,401 - 148,819,753 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | H1 | NCBI | | | | | cM Map | 3 | 66.69 | NCBI | | | | |
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Pdlim5 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 2 | 233,625,478 - 233,793,582 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 2 | 230,952,251 - 231,120,329 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 2 | 230,952,248 - 231,120,275 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 2 | 238,713,360 - 238,878,372 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 2 | 236,606,376 - 236,771,391 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 2 | 231,471,039 - 231,636,044 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 2 | 247,815,214 - 247,989,198 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 2 | 247,818,243 - 247,988,462 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 2 | 266,345,722 - 266,518,817 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 2 | 240,177,301 - 240,304,192 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 2 | 240,164,042 - 240,283,654 (-) | NCBI | | | | | Celera | 2 | 223,009,335 - 223,173,420 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | q44 | NCBI | | | | |
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Pdlim5 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955405 | 5,109,778 - 5,315,092 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955405 | 5,109,778 - 5,312,192 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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PDLIM5 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 3 | 92,478,961 - 92,695,404 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 4 | 92,758,171 - 92,974,628 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 4 | 86,814,136 - 87,030,605 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 4 | 97,486,566 - 97,702,060 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 4 | 97,486,566 - 97,702,060 (+) | Ensembl | panpan1.1 | | panPan2 | |
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PDLIM5 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 32 | 17,294,023 - 17,505,212 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 32 | 17,294,073 - 17,502,409 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 32 | 24,444,240 - 24,655,897 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 32 | 17,472,836 - 17,683,974 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 32 | 17,472,845 - 17,683,970 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 32 | 17,445,268 - 17,656,838 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 32 | 17,266,060 - 17,477,973 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 32 | 22,414,982 - 22,632,647 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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PDLIM5 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 8 | 125,044,028 - 125,259,945 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 8 | 125,044,027 - 125,259,969 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 8 | 134,331,215 - 134,558,541 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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PDLIM5 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 7 | 42,702,175 - 42,912,859 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 7 | 42,819,454 - 42,908,137 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666037 | 21,065,966 - 21,276,910 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Pdlim5 (Heterocephalus glaber - naked mole-rat) |
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