Memor9 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Memor9 (Memory QTL 9) Rattus norvegicus

Symbol: Memor9
Name: Memory QTL 9
RGD ID: 1598813
Previously known as: Nav-9
Trait: exploratory behavior trait   (VT:0010471)    
Measurement Type: average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus   (CMO:0002674)    
LOD Score: 2.7
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22199,341,726 - 234,244,620RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.02214,870,793 - 251,212,353RGD_MAPPER_PIPELINERnor6.0
Rnor_5.02234,324,242 - 269,740,088RGDRnor5.0
RGSC_v3.42207,443,643 - 243,502,158RGDRGSC3.4
RGSC_v3.12207,406,398 - 243,488,898RGD
Cross Type: intercross
Strains Crossed: SR/JrHsd SS/JrHsd 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
SR/JrHsd  (IEA)
SS/JrHsd  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Genome-wide scan for quantitative trait loci influencing spatial navigation and social recognition memory in Dahl rats. Ruiz-Opazo N and Tonkiss J, Physiol Genomics. 2006 Jul 12;26(2):145-51.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1583884Tp53-ps2tumor protein p53, pseudogene 22199397087199398062Rat
1583881Hspa8-ps16heat shock protein family A (Hsp70) member 8, pseudogene 162199582946199605242Rat
41387344LOC120101124small nucleolar RNA U32199806611199806680Rat
41286642Ppp1r3b-ps1protein phosphatase 1, regulatory subunit 3b, pseudogene 12199893670199894221Rat
40976050LOC120101345small nucleolar RNA SNORA172200122587200122699Rat
2323099Hmox2-ps1heme oxygenase (decycling) 2, pseudogene 12200299951200302161Rat
1590835Gapdh-ps112Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 1122200476170200499253Rat
2323877Snrpc-ps6small nuclear ribonucleoprotein polypeptide C, pseudogene 62200602408200602863Rat
1590834Amd1-ps1adenosylmethionine decarboxylase 1, pseudogene 12200850782200855868Rat
1582794Amy2a3-ps1amylase 2a3, pseudogene12201099263201133328Rat
1593160Amy2-ps2amylase 2, pancreatic, pseudogene 22201152306201161819Rat
1582784Tcerg1-ps1transcription elongation regulator 1, pseudogene 12201235177201239266Rat
41131609LOC120100609pancreatic alpha-amylase-like2201261621201270188Rat
41125922LOC120100610pancreatic alpha-amylase-like2201290460201299030Rat
1593187Amy2a3amylase 2a32201317916201326487Rat
9468847LOC103689940pancreatic alpha-amylase-like2201344912201353500Rat
2113Amy1amylase alpha 12201382678201397487Rat
1582776Rnpc3RNA-binding region (RNP1, RRM) containing 32201432769201457015Rat
41301904Rpl5-ps7ribosomal protein L5, pseudogene 72201458087201458775Rat
41101626LOC12010061139S ribosomal protein L30, mitochondrial-like2201553021201555037Rat
2372Col11a1collagen type XI alpha 1 chain2201820715202013853Rat
41311726Trnal-aag14transfer RNA leucine (anticodon AAG) 142201994225201994297Rat
41283778LOC120101255small nucleolar RNA SNORA182202424997202425127Rat
41097715LOC120101222U7 small nuclear RNA2202643627202643687Rat
41119654LOC120101352small nucleolar RNA SNORA172202658109202658229Rat
628672Olfm3olfactomedin 32202729610202952120Rat
11462373LOC10835028460S ribosomal protein L19 pseudogene2203104746203105412Rat
41163410LOC120101298small nucleolar RNA SNORA172203244376203244507Rat
61958S1pr1sphingosine-1-phosphate receptor 12203624752203629110Rat
7567274LOC102548358uncharacterized LOC1025483582203696213203716885Rat
41340992LOC120100612uncharacterized LOC1201006122203762980203765924Rat
1307867Dph5diphthamide biosynthesis 52203804620203858196Rat
1307873Slc30a7solute carrier family 30 member 72203855484203922155Rat
1307684Extl2exostosin-like glycosyltransferase 22203922217203946940Rat
41012250LOC120100923uncharacterized LOC1201009232203941591203969841Rat
1559607Rpl13-ps18ribosomal protein L13, pseudogene 182204009986204014698Rat
1597284Rps27a-ps24ribosomal protein S27a, pseudogene 242204026425204026952Rat
3952Vcam1vascular cell adhesion molecule 12204038120204057852Rat
41167949LOC120100924uncharacterized LOC1201009242204129494204143914Rat
61921Gpr88G-protein coupled receptor 882204191443204199576Rat
1304649Cdc14acell division cycle 14A2204225540204380927Rat
41224544LOC120100925uncharacterized LOC1201009252204379721204388113Rat
1303111RtcaRNA 3'-terminal phosphate cyclase2204455175204476450Rat
68403Dbtdihydrolipoamide branched chain transacylase E22204481744204510612Rat
1585106Lrrc39leucine rich repeat containing 392204516122204535463Rat
1565211Trmt13tRNA methyltransferase 13 homolog2204533630204547711Rat
1306255Sass6SAS-6 centriolar assembly protein2204546660204578930Rat
9294064Mfsd14amajor facilitator superfamily domain containing 14A2204579174204611600Rat
7619243LOC102548510uncharacterized LOC1025485102204611673204629458Rat
1308615Slc35a3solute carrier family 35 member A32204620103204659319Rat
1306376Aglamylo-alpha-1,6-glucosidase and 4-alpha-glucanotransferase2204705053204760966Rat
41178598LOC120100926uncharacterized LOC1201009262204765319204791564Rat
7718047LOC102548573uncharacterized LOC1025485732204819203204820797Rat
1306883Frrs1ferric-chelate reductase 12204820898204881487Rat
1305624Palmdpalmdelphin2204889526204941355Rat
7744866LOC102548639uncharacterized LOC1025486392204924820204938252Rat
727806Plppr4phospholipid phosphatase related 42205371317205412302Rat
1309567Plppr5phospholipid phosphatase related 52205525466205737892Rat
1305480Snx7sorting nexin 72205843164205927737Rat
7639661LOC102549046uncharacterized LOC1025490462206058202206073880Rat
40970963LOC120100927uncharacterized LOC1201009272206081120206106846Rat
41373814LOC120100928uncharacterized LOC1201009282206094016206106626Rat
41101793LOC120100929uncharacterized LOC1201009292206158858206168296Rat
41099910LOC120100930uncharacterized LOC1201009302206309782206320787Rat
9134989Rpl29-ps19ribosomal protein L29, pseudogene 192206395238206395694Rat
41283458LOC120100931uncharacterized LOC1201009312206476952206563532Rat
2325570Mir137microRNA 1372206480881206480982Rat
621218Dpyddihydropyrimidine dehydrogenase2206609043207474982Rat
41124880Srsf3-ps10serine and arginine rich splicing factor 3, pseudogene 102207531152207531595Rat
41116120LOC120101052glyceraldehyde-3-phosphate dehydrogenase-like2207573774207574392Rat
9452817LOC10369168340S ribosomal protein S25 pseudogene2207801725207802164Rat
1359267Ptbp2polypyrimidine tract binding protein 22207812659207874019Rat
40963561LOC120101155U6 spliceosomal RNA2208079080208079186Rat
41379236LOC120100933uncharacterized LOC1201009332208145717208160885Rat
11489382LOC108350096uncharacterized LOC1083500962208162382208197773Rat
11461856LOC10835020760S ribosomal protein L7a pseudogene2208226649208229806Rat
41368927LOC120101323small nucleolar RNA SNORA172208691757208691893Rat
7689133LOC102553943uncharacterized LOC1025539432208811155208902561Rat
41204947LOC120101150U6 spliceosomal RNA2209080591209080697Rat
620472Rwdd3RWD domain containing 32209233622209254842Rat
1563041Tlcd4TLC domain containing 42209284873209360156Rat
1312003Alg14ALG14, UDP-N-acetylglucosaminyltransferase subunit2209368285209445425Rat
41047991Rps19-ps5ribosomal protein S19, pseudogene 52209391463209400978Rat
41057139LOC120100935uncharacterized LOC1201009352209455803209471532Rat
9160273LOC103691685uncharacterized LOC1036916852209483062209485542Rat
71044Cnn3calponin 32209518948209550107Rat
1305808Slc44a3solute carrier family 44, member 32209552138209628182Rat
41398164Rps26-ps10ribosomal protein S26, pseudogene 102209609564209609936Rat
41057892LOC120100615uncharacterized LOC1201006152209685919209688475Rat
7725447LOC102554786uncharacterized LOC1025547862209793551209809684Rat
7551151LOC102555482uncharacterized LOC1025554822209814809209826925Rat
2587F3coagulation factor III, tissue factor2209827061209838666Rat
2007Abcd3ATP binding cassette subfamily D member 32209852087209905763Rat
11480249LOC108350099uncharacterized LOC1083500992209905915209913027Rat
11406694LOC108350100uncharacterized LOC1083501002209944515209947600Rat
11513964LOC108350286uncharacterized LOC1083502862210050745210060860Rat
1306185Arhgap29Rho GTPase activating protein 292210060036210132572Rat
1309445Abca4ATP binding cassette subfamily A member 42210164813210302069Rat
7596073LOC102555028uncharacterized LOC1025550282210331569210347164Rat
619871Gclmglutamate cysteine ligase, modifier subunit2210347482210367537Rat
6497192Dnttip2deoxynucleotidyltransferase, terminal, interacting protein 22210374321210386366Rat
11467540Trnar-ucu3transfer RNA arginine (anticodon UCU) 32210391950210392034Rat
2325489Mir760microRNA 7602210392616210392695Rat
7736595Gapdh-ps12Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 122210426206210427137Rat
41285011LOC120100937uncharacterized LOC1201009372210472206210481495Rat
7656864LOC102555173uncharacterized LOC1025551732210479038210503307Rat
1311688Bcar3BCAR3 adaptor protein, NSP family member2210525260210638674Rat
1305386Fnbp1lformin binding protein 1-like2210647241210748203Rat
1560826Gapdhl9glyceraldehyde-3-phosphate dehydrogenase like 92210784633210785652Rat
620995Pde5aphosphodiesterase 5A2210858515211003480Rat
7674945LOC102550474uncharacterized LOC1025504742211033028211055822Rat
2591Fabp2fatty acid binding protein 22211040032211044089Rat
1594660Arlnallregulin2211055925211057685Rat
1306615Usp53ubiquitin specific peptidase 532211059512211120942Rat
1307669Myoz2myozenin 22211141463211168187Rat
1590831Amigo1-ps1adhesion molecule with Ig like domain 1, pseudogene 12211178691211179898Rat
1564779Synpo2synaptopodin 22211217099211371267Rat
1311720Sec24dSEC24 homolog D, COPII coat complex component2211418557211526588Rat
1304822Mettl14methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit2211530598211546845Rat
40933303Rnu6atacRNA, U6atac small nuclear2211550817211550946Rat
1563330Elob-ps2elongin B, pseduogene 22211572027211572374Rat
69238Prss12serine protease 122211624134211684126Rat
41363597LOC120101240small nucleolar RNA SNORA242211685412211685541Rat
1310960Ndst3N-deacetylase and N-sulfotransferase 32211702728211868159Rat
2322330Etv5-ps4ETS variant transcription factor 5, pseudogene 42211924809211961519Rat
1594630Hspd1-ps12heat shock protein family D (Hsp60) member 1, pseudogene 122212006958212007894Rat
41096747Rps6-ps9ribosomal protein S6, pseudogene 92212165073212167335Rat
1594628Rpl19-ps21ribosomal protein L19, pseudogene 212212442681212443245Rat
9137798LOC103691690uncharacterized LOC1036916902212510779212535802Rat
1306398Tram1l1translocation associated membrane protein 1-like 12212511130212513311Rat
13065191700006A11RiklRIKEN cDNA 1700006A11 gene like2212608467212639536Rat
1594621Rpl7-ps8ribosomal protein L7, pseudogene 82212666902212667628Rat
41054813LOC120101312small nucleolar RNA SNORA172212735448212735598Rat
1306704Arhgap20l1Rho GTPase activating protein 20 like 12212831343212839635Rat
41293218Rps24-ps9ribosomal protein S24, pseudogene 92212891720212892135Rat
41349360LOC120101122small nucleolar RNA U32213362635213362846Rat
1594609Gypc-ps1glycophorin C, pseudogene 12213661711213662050Rat
1597150Hspa8-ps6heat shock protein family A (Hsp70) member 8, pseudogene 62213748303213750313Rat
1306531Ndst4N-deacetylase and N-sulfotransferase 42213787010214119514Rat
40969977Rpl7-ps17ribosomal protein L7, pseudogene 172213887491213889898Rat
3938Ugt8UDP glycosyltransferase 82214264483214332769Rat
1591950Hsp90ab1-ps9heat shock protein 90 alpha family class B member 1, pseudogene 92214413390214415054Rat
1307640Arsjarylsulfatase family, member J2214774631214854614Rat
11463850LOC108350105uncharacterized LOC1083501052214785288214802331Rat
1593375Hint1-ps2histidine triad nucleotide binding protein 1, pseudogene 22214895737214904381Rat
2263Camk2dcalcium/calmodulin-dependent protein kinase II delta2215023785215287351Rat
620156Ank2ankyrin 22215378028215954015Rat
41269243LOC120101321small nucleolar RNA SNORA172215462676215462807Rat
41145705LOC120101096uncharacterized LOC1201010962215611948215616858Rat
41024232LOC120101097uncharacterized LOC1201010972215724744215740139Rat
41400624Trnav-aac18transfer RNA valine (anticodon AAC) 182215838478215838559Rat
41176776LOC120101095uncharacterized LOC1201010952215862917215883604Rat
1592474Larp7La ribonucleoprotein 7, transcriptional regulator2215997641216012833Rat
1305834Zgrf1zinc finger, GRF-type containing 12216012911216075608Rat
1309061Neurog2neurogenin 22216092709216095276Rat
1304613Alpk1alpha-kinase 12216126939216247180Rat
9154798Ndufb3l2NADH:ubiquinone oxidoreductase subunit B3 like 22216164030216164560Rat
41077523Rpl29-ps5ribosomal protein L29, pseudogene 52216165804216166270Rat
1359151TifaTRAF-interacting protein with forkhead-associated domain2216257926216267635Rat
1311435Ap1aradaptor-related protein complex 1 associated regulatory protein2216276631216309020Rat
40971331Trnaa-agc70transfer RNA alanine (anticodon AGC) 702216300514216300586Rat
1593351Fam241afamily with sequence similarity 241 member A2216344563216375193Rat
41322125LOC120101099uncharacterized LOC1201010992216394260216402371Rat
1565088Tmem258l1transmembrane protein 258 like 12216443294216443612Rat
11427815Rpl21l2ribosomal protein L21 like 22216500790216501303Rat
41348865LOC120101100histone H3.v1-like2216761898216786397Rat
11446748Rpl29l9ribosomal protein L29 like 92217092889217093275Rat
41007455LOC120101128U4 spliceosomal RNA2217231673217231818Rat
41362352LOC120100617uncharacterized LOC1201006172217253485217281761Rat
2320329Oat-ps1ornithine aminotransferase, pseudogene 12217318433217320112Rat
11389356LOC108350289uncharacterized LOC1083502892217657731217658469Rat
3331Pitx2paired-like homeodomain 22217717738217737293Rat
621228Enpepglutamyl aminopeptidase2217781985217851947Rat
41094358Psmb7-ps1proteasome 20S subunit beta 7, pseudogene 12217969270217970788Rat
628880Dcm5Dcm5 protein2218001929218002696Rat
620585Elovl6ELOVL fatty acid elongase 62218063682218174767Rat
2542Egfepidermal growth factor2218219408218302359Rat
1559637Lrit3leucine-rich repeat, Ig-like and transmembrane domains 32218337215218360318Rat
1308948Rrhretinal pigment epithelium derived rhodopsin homolog2218362195218374387Rat
1563995Gar1GAR1 ribonucleoprotein2218375231218382509Rat
620429Cficomplement factor I2218389079218430565Rat
40944945LOC120100942uncharacterized LOC1201009422218425674218436350Rat
1304662Pla2g12aphospholipase A2, group XIIA2218436497218452742Rat
70967Casp6caspase 62218466063218478503Rat
1305326Mcubmitochondrial calcium uniporter dominant negative subunit beta2218479301218549594Rat
1309358Sec24bSEC24 homolog B, COPII coat complex component2218562670218632753Rat
41155962Trnak-uuutransfer RNA lysine (anticodon UUU)2218650664218650736Rat
1590105Col25a1collagen type XXV alpha 1 chain2218755152219154348Rat
41087078LOC120101132U4 spliceosomal RNA2218893592218893722Rat
9069995LOC103691705uncharacterized LOC1036917052218954901218962050Rat
1590098Etnpplethanolamine-phosphate phospho-lyase2219173048219194646Rat
1560708Ostcoligosaccharyltransferase complex non-catalytic subunit2219250549219266076Rat
1309402Rpl34ribosomal protein L342219284373219288108Rat
11382083LOC108350107uncharacterized LOC1083501072219349441219359449Rat
11410644Rpl21l1ribosomal protein L21 like 12219385207219385771Rat
11422469LOC108350291uncharacterized LOC1083502912219431270219437628Rat
41394203LOC120100619uncharacterized LOC1201006192219439426219441145Rat
620241Lef1lymphoid enhancer binding factor 12219666549219779815Rat
9101519Lef1llymphoid enhancer binding factor 1 like2219691441219701617Rat
41380471LOC120100943uncharacterized LOC1201009432219711951219713218Rat
69321Hadhhydroxyacyl-CoA dehydrogenase2219787935219830335Rat
1309433Cyp2u1cytochrome P450, family 2, subfamily u, polypeptide 12219849403219866959Rat
7625966Aimp1-ps1aminoacyl tRNA synthetase complex-interacting multifunctional protein 1, pseudogene 12219855905219864052Rat
1305778Sgms2sphingomyelin synthase 22219889809219967704Rat
11404996LOC108350108uncharacterized LOC1083501082219916828219934897Rat
41260335LOC120100944uncharacterized LOC1201009442219976241219979672Rat
41156518Pbdc1-ps2polysaccharide biosynthesis domain containing 1, pseudogene 22220020063220022513Rat
1308081Papss13'-phosphoadenosine 5'-phosphosulfate synthase 12220040343220114399Rat
40994666Rnvu1-6RNA, variant U1 small nuclear 62220206250220206413Rat
1594188Actr10-ps1actin related protein 10, pseudogene 12220553641220554855Rat
1308639Dkk2dickkopf WNT signaling pathway inhibitor 22220568338220660225Rat
41214852Rnu6-482RNA, U6 small nuclear 4822221038075221038177Rat
7738424LOC102547683uncharacterized LOC1025476832221090549221103890Rat
1563706Gimd1GIMAP family P-loop NTPase domain containing 12221103878221138559Rat
620466Aimp1aminoacyl tRNA synthetase complex-interacting multifunctional protein 12221151907221175458Rat
1307816TbckTBC1 domain containing kinase2221175749221348058Rat
41108173LOC120101311small nucleolar RNA SNORA172221294661221294790Rat
1593709Npntnephronectin2221391151221459527Rat
1590828Meak7-ps1MTOR associated protein, eak-7 homolog, pseudogene 12221459266221464322Rat
7720012LOC102548236uncharacterized LOC1025482362221475058221499118Rat
1311822Gstcdglutathione S-transferase, C-terminal domain containing2221499732221591888Rat
1359136Ints12integrator complex subunit 122221591761221609497Rat
1311728Arhgef38Rho guanine nucleotide exchange factor 382221610212221739841Rat
7572082LOC102546359uncharacterized LOC1025463592221797737221800778Rat
1307965Ppa2inorganic pyrophosphatase 22221800791221878079Rat
1591740Gpbp1l2GC-rich promoter binding protein 1-like 22221964036221967463Rat
1311625Tet2tet methylcytosine dioxygenase 22221988645222072813Rat
41280602LOC120101230small nucleolar RNA SNORA702222110982222111103Rat
2323726Rpl10l4ribosomal protein L10 like 42222111139222111551Rat
40967376LOC120101282small nucleolar RNA SNORA172222114424222114555Rat
11437904LOC108350114glyceraldehyde-3-phosphate dehydrogenase pseudogene2222128067222141244Rat
41224173LOC120100946uncharacterized LOC1201009462222629081222668827Rat
69228Cxxc4CXXC finger protein 42222664148222689365Rat
2323572Dtwd2-ps1DTW domain containing 2, pseudogene 12222787557222789283Rat
3810Tacr3tachykinin receptor 32223266536223363791Rat
41360797LOC12010062140S ribosomal protein S26-like2223598382223598776Rat
1589432Myl12a-ps1myosin light chain 12A, pseudogene 12223610495223611007Rat
1307115Cenpecentromere protein E2223637035223695692Rat
1309898Bdh23-hydroxybutyrate dehydrogenase 22223702410223723076Rat
1598112Slc9b2solute carrier family 9 member B22223726982223761234Rat
1305087Slc9b1solute carrier family 9 member B12223769105223818359Rat
41037515LOC120101362small nucleolar RNA SNORA262223824846223824966Rat
1566242Cisd2CDGSH iron sulfur domain 22223828937223853768Rat
619912Ube2d3ubiquitin-conjugating enzyme E2D 32223868397223899606Rat
1305785Manbamannosidase beta2223910432224002988Rat
40993262LOC120101140U6 spliceosomal RNA2224015573224015679Rat
70498Nfkb1nuclear factor kappa B subunit 12224016214224132135Rat
41144425Rnu2-72RNA, U2 small nuclear 722224145615224145716Rat
1308236Slc39a8solute carrier family 39 member 82224171787224319326Rat
11462118LOC10835011660S ribosomal protein L7 pseudogene2224181434224222483Rat
1564639Bank1B-cell scaffold protein with ankyrin repeats 12224530475224800420Rat
9294131Rpl29l8ribosomal protein L29 like 82224815128224815436Rat
3382Ppp3caprotein phosphatase 3 catalytic subunit alpha2225165981225440978Rat
1588169Pacsin3-ps1protein kinase C and casein kinase substrate in neurons 3, pseudogene 12225474055225475975Rat
40939843LOC120100622uncharacterized LOC1201006222225885497225888436Rat
1303218Emcnendomucin2225891100225970932Rat
41011800LOC120100949uncharacterized LOC1201009492226057178226074795Rat
2322961Ddit4lDNA-damage-inducible transcript 4-like2226128273226131044Rat
11496584LOC108350121uncharacterized LOC1083501212226205496226207736Rat
11399629LOC108350122uncharacterized LOC1083501222226302496226318543Rat
7562111Rpl17-ps6ribosomal protein L17, pseudogene 62226326906226327481Rat
621464H2az1H2A.Z variant histone 12226355668226357984Rat
1591949Dnajb14DnaJ heat shock protein family (Hsp40) member B142226358988226409461Rat
1307133Lamtor3late endosomal/lysosomal adaptor, MAPK and MTOR activator 32226411389226423612Rat
1310189Dapp1dual adaptor of phosphotyrosine and 3-phosphoinositides 12226425890226475445Rat
41077741LOC120100950uncharacterized LOC1201009502226438865226442299Rat
41162421LOC120100951uncharacterized LOC1201009512226480844226485594Rat
1590827Nlk-ps1nemo like kinase, pseudogene 12226517676226519713Rat
1591948Mindy3-ps1MINDY lysine 48 deubiquitinase 3, pseudogene 12226521817226527142Rat
7750470LOC102555623uncharacterized LOC1025556232226558532226578601Rat
7695964C2h4orf54similar to human chromosome 4 open reading frame 542226580582226599354Rat
1308388Mttpmicrosomal triglyceride transfer protein2226613090226654239Rat
1594565Trmt10atRNA methyltransferase 10A2226669445226684166Rat
1309170C2h4orf17similar to human chromosome 4 open reading frame 172226693808226722277Rat
1584721Metap2-ps4methionyl aminopeptidase 2, pseudogene 42226738713226740586Rat
621638Adh7alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide2226748724226763183Rat
2044Adh1calcohol dehydrogenase 1C (class I), gamma polypeptide2226797303226808892Rat
1310029Adh6aalcohol dehydrogenase 6A (class V)2226823775226846005Rat
1595864Adh1-ps1alcohol dehydrogenase 1C (class I), gamma polypeptide, pseudogene 12226862836226881171Rat
11424141LOC108350123uncharacterized LOC1083501232226879275226881249Rat
1306313Adh6alcohol dehydrogenase 6 (class V)2226903208226934564Rat
71028Adh4alcohol dehydrogenase 4 (class II), pi polypeptide2226948717226966747Rat
2292706Adh5alcohol dehydrogenase 5 (class III), chi polypeptide2226975184226987591Rat
1305545Metap1methionyl aminopeptidase 12226991305227024360Rat
7699806LOC102556448uncharacterized LOC1025564482227046507227052126Rat
69647Eif4eeukaryotic translation initiation factor 4E2227066519227099261Rat
9685091Mir1956microRNA 19562227066526227066588Rat
7743957LOC102547266uncharacterized LOC1025472662227238591227271656Rat
1303176Tspan5tetraspanin 52227294180227469361Rat
1560590Hspa8-ps20heat shock protein family A (Hsp70) member 8, pseudogene 202227488250227490321Rat
1308558Rap1gds1Rap1 GTPase-GDP dissociation stimulator 12227500366227645213Rat
41024593LOC120100955uncharacterized LOC1201009552227530080227561990Rat
41206447Nme2-ps3NME/NM23 nucleoside diphosphate kinase 2, pseudogene 32227696512227697495Rat
41129485LOC120101272small nucleolar RNA SNORA482227718981227719125Rat
1591946Stpg2sperm-tail PG-rich repeat containing 22227764266228285664Rat
6496054Cycs-ps2cytochrome c, somatic, pseudogene 22228057525228059101Rat
41210344LOC120101136U6 spliceosomal RNA2228059072228059178Rat
41257633LOC120101162U6 spliceosomal RNA2228169721228169827Rat
1590825Rps10-ps14ribosomal protein S10, pseudogene 142228301082228301564Rat
41331959LOC120101220U7 small nuclear RNA2228491892228491955Rat
41253766LOC120101108U2 spliceosomal RNA2228566040228566192Rat
40946169Trnav-aac23transfer RNA valine (anticodon AAC) 232228767419228767489Rat
2321664Aspscr1-ps1ASPSCR1 tether for SLC2A4, UBX domain containing, pseudogene 12228792286228793721Rat
41096450LOC120100956uncharacterized LOC1201009562229528518229545145Rat
9089379LOC103691720uncharacterized LOC1036917202229741900229876749Rat
620095Pdha2pyruvate dehydrogenase E1 subunit alpha 22229872300229873848Rat
735109Unc5cunc-5 netrin receptor C2230180353230535219Rat
1595863Bmpr1bbone morphogenetic protein receptor type 1B2230538252230871077Rat
621076Pdlim5PDZ and LIM domain 52230952251231120329Rat
41040699Rpl39-ps9ribosomal protein L39, pseudogene 92231154550231158955Rat
1311040Gbp5guanylate binding protein 52231237748231257071Rat
1583235Gbp7guanylate binding protein 72231275521231297289Rat
1310579Gbp4guanylate binding protein 42231304910231318883Rat
621810Gbp2guanylate binding protein 22231332488231348573Rat
1311877Gbp1guanylate binding protein 12231398136231432773Rat
1597766Gbp3guanylate binding protein 32231460032231500266Rat
41121145LOC120101154U6 spliceosomal RNA2231513755231513861Rat
1560801Gbp1-ps1guanylate binding protein 1, pseudogene 12231517485231525865Rat
1584233Gbp6-ps2guanylate binding protein 6, pseudogene 22231643579231672818Rat
1359262Kyat3kynurenine aminotransferase 32231701881231747462Rat
11361756LOC108350125uncharacterized LOC1083501252231759164231767187Rat
619735Gtf2bgeneral transcription factor IIB2231767317231785626Rat
41219769Rnu6-503RNA, U6 small nuclear 5032231776535231776641Rat
620146Pkn2protein kinase N22231793584231898953Rat
7740925LOC102546591uncharacterized LOC1025465912231915170231944275Rat
41182245LOC120100957uncharacterized LOC1201009572231978621231987035Rat
11452044LOC108350126uncharacterized LOC1083501262232084651232087782Rat
41097702LOC120100959uncharacterized LOC1201009592232435038232454741Rat
41187575LOC120100958uncharacterized LOC1201009582232439706232462245Rat
7633711LOC102546938uncharacterized LOC1025469382232552428232604876Rat
41208624LOC120100960uncharacterized LOC1201009602233102614233153460Rat
41287178LOC120100961uncharacterized LOC1201009612233138097233143134Rat
1305670Lmo4LIM domain only 42233264180233280881Rat
11484619LOC108350128uncharacterized LOC1083501282233470949233477899Rat
7597955LOC102549483uncharacterized LOC1025494832233490907233505798Rat
1305366Hs2st1heparan sulfate 2-O-sulfotransferase 12233508018233641769Rat
621291Selenofselenoprotein F2233642075233674853Rat
41169203LOC120100962uncharacterized LOC1201009622233642432233645492Rat
40954943LOC120100963uncharacterized LOC1201009632233732380233740609Rat
1304859Sh3glb1SH3 domain -containing GRB2-like endophilin B12233750838233784817Rat
621100Clca5chloride channel accessory 52233796569233818867Rat
1591945Clca4lchloride channel calcium activated 4-like2233826133233846137Rat
7715322LOC102549543uncharacterized LOC1025495432233826602233865540Rat
1303234Clca4chloride channel accessory 42233883625233904993Rat
1306258Clca1chloride channel accessory 12233938677233964369Rat
1304894Clca2chloride channel accessory 22233993619234022691Rat
1593831Odf2louter dense fiber of sperm tails 2-like2234036049234072751Rat
1565539Col24a1collagen type XXIV alpha 1 chain2234212256234469445Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
34461D2Mgh121492202446871202447032Ratregion
34495D2Mgh291322218414747218414891Ratregion
36031D2Rat543072201835753201836059Ratregion
36081D2Rat2941472227146480227146641Ratregion
36173D10Rat231572215377404215377559Ratregion
37532D2Rat1481752209616310209616482Ratregion
37552D2Rat1851712229059610229059787Ratregion
35290D2Rat601452214226044214226187Ratregion
36876D2Rat881402213594355213594495Ratregion
36962D2Rat631232222436573222436696Ratregion
36994D2Rat581252210769803210769918Ratregion
37796D2Rat1032352231871034231871243Ratregion
36705D2Rat1511252231745742231745867Ratregion
34785D2Rat651562226102309226102471Ratregion
34864D2Rat671712234244455234244620Ratregion
34884D2Rat571672210020726210020885Ratregion
34906D2Rat2461252227573870227573998Ratregion
35064D2Rat641812223265204223265385Ratregion
35100D2Rat851592232448220232448379Ratregion
35599D2Rat821592206312063206312224Ratregion
35613D2Rat591312212549332212549467Ratregion
35693D2Rat551722203928125203928301Ratregion
35755D2Rat661822232634286232634457Ratregion
35849D2Rat621732219753301219753474Ratregion
35887D2Rat561762212072364212072559Ratregion
39878D2Rat2422162211674003211674221Ratregion
38054D2Rat1382332221166836221167075Ratregion
40528D2Rat2401252204671344204671471Ratregion
40540D2Rat2491522226814878226815018Ratregion
40596D2Rat2891742206264652206264828Ratregion
38466D2Rat1182382206665645206665859Ratregion
38554D2Rat1122042232374126232374340Ratregion
38566D2Rat1212002210020720210020912Ratregion
40152D2Rat2431662212719781212719943Ratregion
40254D2Rat2621252204826190204826315Ratregion
40344D2Rat2613602202085716202086074Ratregion
38852D2Rat1652492221035642221035911Ratregion
38942D2Rat1562072219003602219003804Ratregion
39040D2Rat1692092199341726199341941Ratregion
39118D2Rat1391382223490383223490532Ratregion
39240D2Rat922002226936119226936289Ratregion
39526D2Rat2962002230469531230469773Ratregion
41462D2Rat2451252224813322224813458Ratregion
42619D2Rat3582412207975291207975490Ratregion
42620D2Rat3821562211883385211883522Ratregion
42621D2Rat3592182211137871211138097Ratregion
42622D2Rat3602182215641574215641788Ratregion
42623D2Rat2911822216155848216156021Ratregion
42624D2Rat3611432219363866219364017Ratregion
42625D2Rat3622472221122010221122274Ratregion
42626D2Rat3902132217480645217480845Ratregion
42627D2Rat2922482221122010221122275Ratregion
42628D2Rat2931412224786940224787090Ratregion
42629D2Rat2952182230963738230963986Ratregion
42630D2Rat3641122227573883227573998Ratregion
41066D2Rat2471632226277159226277316Ratregion
43300D2Got1912062202824790202824996Ratregion
43309D2Got1681882233624675233624865Ratregion
43578D2Got1401192204360383204360502Ratregion
43579D2Got1352422204574182204574424Ratregion
43579D2Got1352422204574182204574424Ratregion
43581D2Wox82502204499123204499414Ratregion
43582D2Got1452732207071189207071463Ratregion
43583D2Got1431452205849220205849365Ratregion
43583D2Got1431452205849220205849365Ratregion
43588D2Got1472752212281264212281539Ratregion
43590D2Got1461752210525750210525927Ratregion
43591D2Got1942872222842003222842288Ratregion
43592D2Got1571662212516908212517074Ratregion
43594D2Got1512222216688335216688557Ratregion
43595D2Got1931132215707839215707952Ratregion
43596D2Got1541322218214633218214765Ratregion
43598D2Got1522802215185542215185822Ratregion
43599D2Got1502732217254731217255004Ratregion
43600D2Got1482232216633522216633745Ratregion
43601D2Got1551692215169809215169980Ratregion
43603D2Got1531442215983410215983554Ratregion
43604D2Got1922512215185563215185814Ratregion
43606D2Got1632132233098929233099142Ratregion
45595D18Got32812211768247211768497Ratregion
45724DXGot121762204635903204636081Ratregion
60289D2Got1371842205254172205254358Ratregion
60292D2Got1411472204421772204421919Ratregion
60293D2Got1421992206534431206534634Ratregion
60294D2Got1442612206584378206584639Ratregion
60295D2Got1491542213652863213653017Ratregion
60296D2Got1582222231473370231473592Ratregion
60297D2Got1591392227666267227666406Ratregion
60299D2Got1612242230784226230784458Ratregion
60300D2Got1622282228270443228270671Ratregion
60301D2Got1651972233226815233227012Ratregion
62500D2Uia71582211692571211692729Ratregion
66474D2Uia122152220360923220361140Ratregion
66529D2Mco43202206094435206094754Ratregion
66531D2Mco51122223024296223024402Ratregion
67314D2Arb232982209852836209853134Ratregion
67315D2Arb243102212696524212696837Ratregion
67328D2Arb391432210016069210016212Ratregion
67794D2Uwm101442206849322206849464Ratregion
1630255D2Got3551572220302444220302596Ratregion
1630931D2Got3872972226369038226369335Ratregion
1630989D2Got3622212227059234227059455Ratregion
1631332D2Got4032392215894624215894860Ratregion
1631473D2Wox641772210855826210856003Ratregion
1628117D2Got3591662224160255224160421Ratregion
1628308D2Wox672402217853183217853423Ratregion
1629030D2Got3601322224430206224430339Ratregion
1630017D2Got4021932226895574226895771Ratregion
1639353D2Got4242102212510656212510870Ratregion
1639367D2Ulb152892218904568218904859Ratregion
1639714D2Got3572722224792464224792736Ratregion
1641596D2Mco501302224097958224098088Ratregion
1632674D2Got3672072220130961220131168Ratregion
1633066D2Got4112022226263171226263369Ratregion
1633398D2Ulb141712218904568218904741Ratregion
1640232D2Wox693502212696518212696870Ratregion
1640426D2Got4282962222280947222281238Ratregion
1640446D2Got4182752227157054227157329Ratregion
1635199D2Got3581422223887815223887957Ratregion
1635371D2Got3611572224805112224805269Ratregion
1635674D2Got4142362201198472201198705Ratregion
1636228D2Got3821292226302004226302131Ratregion
1637146D2Got395992207207297207207396Ratregion
1633684D2Got3561282220302464220302592Ratregion
7205980MARC_8975-8976:1025019065:38272230560856230561683Ratregion
7206044Tet21032222000938222001041Ratregion
7364904rs10746442802217906389217906389Ratregion
7364906rs6505718602210463377210463377Ratregion
7364907rs1345378602215613858215613858Ratregion
8693312rs1054953062221136523221136523Ratregion
8693316rs1057769942217139753217139753Ratregion
5038618BE1991611002233996311233996411Ratregion
5038786RH1273322162233753013233753229Ratregion
5038790RH1273342042226423312226423516Ratregion
5038792RH1273352052233674367233674572Ratregion
5036135D10Bir123342219564514219564848Ratregion
7206740ksks4431592226357085226357512Ratregion
5039230RH1275871812226426058226426239Ratregion
5039252RH1275991862209549845209550031Ratregion
5036605AU0485752452233464376233464619Ratregion
5036841AU0493801122210161373210161485Ratregion
5036885AU0495122532231483912231484165Ratregion
5035598SHGC-672551062225438449225438555Ratregion
5033847RH1403391432218563243218563384Ratregion
5033965RH1407852212211002694211002915Ratregion
5025952RH1303291872226992561226992748Ratregion
5025968RH1303932032210482073210482276Ratregion
5034013RH1410271802225972027225972207Ratregion
5034019RH1410492202218562765218562985Ratregion
5034119RH1414351912204529202204530490Ratregion
5026130RH1310271992215997862215998061Ratregion
5034327AI5018542062224318762224318968Ratregion
5026318RH1317512112233826314233826525Ratregion
5026392RH1320301812204880878204881059Ratregion
5034478BF415569992225329115225329214Ratregion
5026516RH1325122202221590735221590955Ratregion
5029185RH1438361022207824571207824673Ratregion
5034518BI2742791752211530900211531075Ratregion
5034604AW5209622112207474441207474652Ratregion
5034636BF3905141552215430667215430822Ratregion
5032076D3Mit1421482206489414206489562Ratregion
5032117RH944481272226804370226804497Ratregion
5032117RH944481272226925460226925587Ratregion
5034742BE1009512182204706941204707159Ratregion
5026826RH1336791812218362369218362550Ratregion
5032257AI6624582672209233822209234089Ratregion
5035362BE1151991512203857457203857608Ratregion
5027163WI-215702662214853226214853492Ratregion
5027257AW491075932215378422215378515Ratregion
5027259AF0601781472233510084233510231Ratregion
5032817RH1354112112215861970215862181Ratregion
5030069BI2920691742231468124231468298Ratregion
5030129BI2929911672232513351232513518Ratregion
5030165BF4011251112209714143209714254Ratregion
5030177BF3959051292211004092211004221Ratregion
5032957RH1371001612225970767225970928Ratregion
5032999RH1372391962210386036210386232Ratregion
5024980BB448270862231794764231794850Ratregion
5027665Taf2s2532201239298201239660Ratregion
5033051RH1374091892206719620206719809Ratregion
5025182RH1273312132226808361226808574Ratregion
5025256RH1276171892216276952216277141Ratregion
502782905.MMHAP26FLB2.seq1082207592145207592253Ratregion
502788722.MMHAP18FLH1.seq1532216596777216596931Ratregion
5033203RH1379621282227346410227346538Ratregion
5025324RH1278801822210366861210367043Ratregion
5025362RH1280222012209549320209549521Ratregion
5027993J054791652225438482225438647Ratregion
5030579BI295662982204523884204523982Ratregion
5030629AI5007512012215777572215777773Ratregion
5030647BI3015831512214169569214169720Ratregion
5025484RH1285001872218174330218174517Ratregion
5025484RH1285001872218174330218174517Ratregion
5025528RH1286712092209852127209852336Ratregion
5028089X586361642219778709219778873Ratregion
5025664RH1291871862220114160220114346Ratregion
5030935BF3995452112221367006221367217Ratregion
5033757RH1400091952224530943224531138Ratregion
5033761RH1400231812227500517227500698Ratregion
5033809RH1402012192223862708223862927Ratregion
5025924RH1302202062219787950219788156Ratregion
5025930RH1302421802211685083211685263Ratregion
5028426AI3856171382230541685230541823Ratregion
5031099BF4061861982225444985225445183Ratregion
5051925RH947371662215287052215287219Ratregion
5054993RH1435431312227501692227501823Ratregion
5055139RH1436281022219830486219830588Ratregion
5055173RH1436481452227292606227292751Ratregion
5053427RH1426421002226683955226684055Ratregion
5056119RH1441931792216281745216282551Ratregion
5056317RH1443091652209341565209341730Ratregion
5056873RH1446301722219296403219296575Ratregion
5051801RH946662652218302670218302935Ratregion
5051801RH946662652218302670218302935Ratregion
5052027RH947972742211039803211040077Ratregion
5054067RH1430121242215776176215776300Ratregion
5057504AW5223701332218372715218372848Ratregion
5055419RH1437901222211059276211059398Ratregion
5054639RH1433402432210387166210387408Ratregion
5054671RH1433582062211215382211215588Ratregion
5059444AW5308421832218809153218809336Ratregion
5059498BE0970961972216075369216075566Ratregion
5055539RH1438591302209542595209542725Ratregion
5055543RH1438621522219401750219401902Ratregion
5054795RH1434301822204193594204193776Ratregion
5055001RH1435482422205928522205928764Ratregion
5055995RH1441221772227469022227469199Ratregion
5059622AW5249201622204038603204038765Ratregion
5056715RH1445382182215283280215283498Ratregion
5056423RH1443692582215636683215636941Ratregion
5052365X921221482214266036214266184Ratregion
5058042BE1018481512215402476215402627Ratregion
5058076BF3865651972219205007219205204Ratregion
5058176BF3867561842209912812209912996Ratregion
5056789RH1445811552230965009230965164Ratregion
5059730BI2918081762203826003203826179Ratregion
5059742BE0977251932215678659215678852Ratregion
5052377Z231431522230541635230541787Ratregion
5053139RH1424761562225303513225303669Ratregion
5053155RH1424851742209527968209528142Ratregion
5053167RH1424921302226999790226999920Ratregion
5058488BI2904871902231827639231827829Ratregion
5050408RH1340392092231793678231793887Ratregion
5059304BG3771491272221611055221611182Ratregion
5059308AI0719941822220660460220660642Ratregion
5050680RH1341961842218306543218306727Ratregion
5050680RH1341961842218306543218306727Ratregion
5053809RH1428631422205616430205616573Ratregion
5050020RH1338161932210647337210647530Ratregion
7193034PPP3CA3682225438480225438848Ratregion
5050158RH1338952182217782221217782439Ratregion
5050206RH1339222072219779447219779654Ratregion
5050344RH1340022122210301835210302047Ratregion
5051254RH1345281992209445001209445200Ratregion
5054393RH1431981662210228530210229480Ratregion
5050670RH1341902152222689023222689238Ratregion
5053225RH1425261782204848564204848742Ratregion
5051761RH946431922209838148209838339Ratregion
5051803RH946671542209852706209852860Ratregion
5051807RH946691862210367151210367337Ratregion
5054725RH1433891202233999648233999768Ratregion
5051016RH1343892052202012142202012346Ratregion
5041770RH1290481902225440644225440834Ratregion
5043998RH1303512102225439717225439926Ratregion
5044078RH1303971942226377844226378048Ratregion
5044496RH1306361822226132437226132619Ratregion
5044970RH1309082162211253602211253818Ratregion
5041346RH1288042102221391277221391487Ratregion
5041514RH1289002122233756927233757139Ratregion
5045996RH1314991802232084697232084877Ratregion
5046112RH1315652012210479322210479524Ratregion
5041750RH1290371902231019248231019438Ratregion
5045378RH1311441542216282088216282242Ratregion
5048840RH1331361872215248511215248698Ratregion
5048936RH1331911532230734261230734414Ratregion
5048960RH1332052012204237362204237563Ratregion
5047776RH1325221842204200136204200320Ratregion
5049260RH1333781892210132160210132356Ratregion
5049264RH1333802182218219545218219763Ratregion
5048118RH1327181802204455279204455459Ratregion
5046926RH1320342052230952411230952616Ratregion
8663447rs1065472862227026844227026844Ratregion
8663448rs639997392231019630231019630Ratregion
5047236RH1322112182202951652202951870Ratregion
5039424RH1276982172219250684219250901Ratregion
5039606RH1278021802211057462211057642Ratregion
5047354RH1322791972230965526230965723Ratregion
5048486RH1329312022215585818215586020Ratregion
5048524RH1329532092209809152209809450Ratregion
5049586RH1335662042223828934223829138Ratregion
5040034RH1280522022218452422218452624Ratregion
5040282RH1281941992219862686219862886Ratregion
5042694RH1295902022210367720210367922Ratregion
5043018RH1297822042224002741224002945Ratregion
5039700RH1278571942224016559224016753Ratregion
5039892RH1279681972211213921211214118Ratregion
5042424RH1294261812209549874209550055Ratregion
5040800RH1284902202223897045223897265Ratregion
5040894RH1285442102218430201218430411Ratregion
5041082RH1286522042204706144204706348Ratregion
5043178RH1298771842203624810203624994Ratregion
5075514RH1386381622204741843204742005Ratregion
5075570RH1386702442216164169216164413Ratregion
5072378RH1368142352223862708223862943Ratregion
5072428RH1368431812210638326210638507Ratregion
5074188RH1378721442233509378233509522Ratregion
5074254RH1379102502231074716231074966Ratregion
5074376RH1379812072218171996218172203Ratregion
5074376RH1379812072218171996218172203Ratregion
5076748RH1393551572220658840220658997Ratregion
5075340RH1385381522225979779225979931Ratregion
5075362RH1385501342210675441210675575Ratregion
5074854RH1382561732225298708225298881Ratregion
5077408RH1397392052226762914226763119Ratregion
5076020RH1389321502215064808215064958Ratregion
5076614RH1392782262216129254216129480Ratregion
5076774RH139370602210371823210371883Ratregion
5076778RH1393731492211530774211530923Ratregion
5079626RH1411101832218101990218102173Ratregion
5079626RH1411101832218101990218102173Ratregion
5078080RH1401321982222669355222669553Ratregion
5077488RH1397851822209285018209285200Ratregion
5077492RH1397871852204036284204036469Ratregion
5078604RH1404401162211330292211330408Ratregion
5078770RH1405421732231747212231747385Ratregion
5079970RH1413081892226409160226409349Ratregion
5078946RH1406441962203855690203855890Ratregion
5072858RH1370951872219788003219788190Ratregion
5079230RH1408111732210384579210385402Ratregion
5080340RH1415232102221499933221500142Ratregion
5071074RH1348711862226766483226766665Ratregion
5071150RH1349162092218479392218480117Ratregion
5073374RH1373992032223861766223861969Ratregion
5080388RH1415502182204038215204038431Ratregion
5080398RH1415561802215487784215487964Ratregion
5080504RH1416171802205888396205888576Ratregion
5078694RH1404961682216344097216344265Ratregion
5078910RH1406221602211002846211003006Ratregion
5072962RH1371541802223854978223855158Ratregion
5071702RH1352351852233510296233510481Ratregion
5074094RH1378172182225214161225214379Ratregion
5071114RH1348941922203878880203879072Ratregion
5071872RH1353342042227500996227501199Ratregion
5071950RH1353782062201456973201457179Ratregion
5071966RH1353882132209837999209838212Ratregion
5074312RH1379441222209233745209233998Ratregion
5073588RH1375231532209236101209236254Ratregion
5072354RH1368011202214264648214264768Ratregion
5074868RH1382651582230533052230533210Ratregion
5061684BE1058581502227100443227100593Ratregion
5061736BF4027881152205717437205717552Ratregion
5063446BI3018031732226135539226135712Ratregion
5065026BE1089471502216071611216071761Ratregion
5066668AU0482211812208093094208093275Ratregion
5066832AU0481241992221603937221604136Ratregion
5066896AU0480862582224964332224964590Ratregion
5066952AU0480532472207631919207632161Ratregion
5067008AU0480201272227122371227122498Ratregion
5067126AU0479471622204389564204389724Ratregion
5067594AU0476511402226036966226037106Ratregion
5068018AU0473982262232001765232001798Ratregion
5068244AU0472631392213707958213708097Ratregion
5068342AU0472041372202440777202440914Ratregion
5068408AU0471642062213033845213034051Ratregion
5068410AU0471621292226809805226809929Ratregion
5069428AU0465061132207763417207763530Ratregion
5070195RH945271442204038424204038568Ratregion
5070350AI5073821162231795904231796020Ratregion
5069338AU0465621462204879360204879506Ratregion
5069348AU0465562822204885282204885559Ratregion
5063634BF4044461932206519794206519987Ratregion
5060394BI2920982002211249100211249300Ratregion
5062338BE1065501852203930276203930461Ratregion
5065486BF4122611282219531162219531290Ratregion
5061016BF3897141292231779971231780100Ratregion
5063754AW5350781502227561760227561910Ratregion
5065232AA9968312152231795477231795692Ratregion
5065426BE1154621502211537181211537332Ratregion
5060368AW5318301512209446397209446548Ratregion
5064282BE1209791652218476389218476554Ratregion
5064394BF3991981682225443476225443644Ratregion
5066070BE1167081762223887351223887527Ratregion
5061126AW5260882092205371352205371561Ratregion
5061180BE1111461962217819206217819402Ratregion
5064550BE1081111832226987811226987994Ratregion
5064616BF3994501632215860407215860570Ratregion
5063144BI3013551702212259149212259319Ratregion
5063234BF4105441582208945660208945818Ratregion
5064832AA9239282042231348293231348492Ratregion
5064892BF4118101232233490991233491114Ratregion
5064912BF3999111172222003891222004008Ratregion
5066474AU0483352652228082115228082380Ratregion
5061550BF3966701832216290427216290610Ratregion
5086951AI0084541552233995619233995774Ratregion
5087165AI0094061912211141662211141853Ratregion
5087380BQ1954321712227061871227062042Ratregion
5082635BE1198881952225421869225422064Ratregion
5086431BE1150461572226580902226581486Ratregion
5086516BQ2056921982214115145214115343Ratregion
5089747AU0493392292207259428207259657Ratregion
5089153AU0489861072216236922216236955Ratregion
5089153AU0489861072227156041227156073Ratregion
5089903AU0494322032211364935211365138Ratregion
5088036Papss12152220113737220113952Ratregion
5089411AU0491402582204402922204403180Ratregion
5083765AI412898932204510231204510324Ratregion
5084200AA9450991082201432802201432910Ratregion
5090113AU049557992220610890220610991Ratregion
5087157BQ2091151812223931408223931589Ratregion
5087622PMC61071P2792211041422211041501Ratregion
5082071BF4093511262209314980209315106Ratregion
5084794AI2358022002226405932226406132Ratregion
5085002AI1719911732231257295231257468Ratregion
5082167BI2802261822211141632211141814Ratregion
5085353BQ1959501882219813422219813610Ratregion
5085489BM3831451862217678377217678561Ratregion
5085575AI2306511582201820837201820994Ratregion
5080920RH1418592092209826035209826244Ratregion
5090421AU0497401432230203710230203853Ratregion
5088709AU0487301982217868637217868835Ratregion
5081278RH1420681812209958913209959094Ratregion
5081288RH1420742192210721254210721473Ratregion
5089121AU0489662472206134977206135224Ratregion
5082473BF4160752162225322033225322249Ratregion
5086072AW5287481662231791898231792062Ratregion
5084574AI0139441232223715445223715568Ratregion
5081196RH1420201862209288652209288838Ratregion
5081651BF4144221682206528906206529074Ratregion
5085202BE0964081612219853715219853874Ratregion
5085732AI2330031522226808694226808846Ratregion
5083962AI5999791512202013242202013393Ratregion
5502857Cdc14a7812204226321204227102Ratregion
5503418G338601642221607444221607608Ratregion
5503764UniSTS:470670732216094019216094092Ratregion
5504155D17Jcs979502219458773219459723Ratregion
5504468PMC213488P11032224053636224053739Ratregion
5504839ha23446812210135560210136241Ratregion
5504446PMC209298P12872204051846204052133Ratregion
5505320Unc5c4232230534393230534816Ratregion
5505550GDB:45854614672204488197204489350Ratregion
5505833Ugt8a2622214266341214266603Ratregion
5506123UniSTS:498418742219893918219893992Ratregion
5506751G451521442228769406228769552Ratregion
5506839G464082182220077542220077760Ratregion
5506563PITX2_3808572217736443217737300Ratregion
5507103UniSTS:2245871892213085900213086089Ratregion
5499819UniSTS:2348102002204226739204226939Ratregion
5499821UniSTS:234818892211510769211510858Ratregion
5500198SHGC-15234702216216319216216437Ratregion
5500198SHGC-15234702216216337216216437Ratregion
5500218AU0458841562210384579210385385Ratregion
5500759D2S26631522204026745204026897Ratregion
5500671RH1366051642231785304231785468Ratregion
5500965MARC_9990-9991:997195997:11022201237526201237628Ratregion
5503370RW22082229872928229873136Ratregion
5503841Dkk21062220569176220569282Ratregion
5501536RH694315912219760126219760717Ratregion
5501698EDG110602203626108203627168Ratregion
5501952MARC_20744-20745:1025020999:102218568023218569252Ratregion
5502092MARC_31601-31602:1045759847:13712226357039226357678Ratregion
5502707PPP3CA1112225380592225380703Ratregion
5502889Gpr8810422204192968204194010Ratregion
5502395RH124727862210384579210384665Ratregion
10755485rs645129622228801039228801039Ratregion
152025244rs10727944502206936711206936711Ratregion
Position Markers

Flank 1: (D2Rat169)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22199,341,726 - 199,341,941 (+)MAPPER
Rnor_6.02214,870,793 - 214,871,007NCBI
Rnor_5.02234,324,242 - 234,324,456UniSTS
RGSC_v3.42207,443,644 - 207,443,858UniSTS
RGSC_v3.42207,443,643 - 207,443,858RGD
RGSC_v3.12207,406,398 - 207,406,612RGD
Celera2191,938,099 - 191,938,313UniSTS
RH 3.4 Map21419.41RGD
RH 3.4 Map21419.41UniSTS
SHRSP x BN Map276.2198UniSTS
SHRSP x BN Map276.2198RGD
FHH x ACI Map288.8099RGD
Peak: (D2Rat59)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22212,549,332 - 212,549,467 (+)MAPPER
Rnor_6.02228,582,621 - 228,582,755NCBI
Rnor_5.02247,933,461 - 247,933,595UniSTS
RGSC_v3.42221,131,572 - 221,131,706UniSTS
RGSC_v3.42221,131,552 - 221,131,932RGD
RGSC_v3.12221,118,139 - 221,118,273RGD
Celera2204,947,801 - 204,947,935UniSTS
RH 3.4 Map21543.0RGD
RH 3.4 Map21543.0UniSTS
RH 2.0 Map21098.9RGD
SHRSP x BN Map283.0098RGD
Flank 2: (D2Rat67)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22234,244,455 - 234,244,620 (+)MAPPER
Rnor_6.02251,212,189 - 251,212,353NCBI
Rnor_5.02269,739,924 - 269,740,088UniSTS
RGSC_v3.42243,501,846 - 243,502,158RGD
RGSC_v3.42243,501,991 - 243,502,155UniSTS
RGSC_v3.12243,488,586 - 243,488,898RGD
Celera2226,231,479 - 226,231,643UniSTS
SHRSP x BN Map2102.2098UniSTS
SHRSP x BN Map2102.2098RGD
FHH x ACI Map2112.8599RGD
Cytogenetic Map2q44UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1578648Bss11Bone structure and strength QTL 114.7femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)2114837527211674221Rat
1358356Srcrt1Stress Responsive Cort QTL13.66blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)2161699179222436696Rat
1331734Bp204Blood pressure QTL 2043.61192arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2168358098223265385Rat
631563Hcuc3Hepatic copper content QTL 33.87liver copper amount (VT:0003065)liver copper weight to liver dry weight ratio (CMO:0001512)2229059610249053267Rat
1298075Scl17Serum cholesterol level QTL 173.4blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)2211744537249053267Rat
1298074Bp164Blood pressure QTL 1640.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242804607202447032Rat
1354648Bp239Blood pressure QTL 2390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)266118463226797303Rat
1354649Kidm17Kidney mass QTL 172.9kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)281754530227146641Rat
1300126Bp175Blood pressure QTL 1753.46arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2214226044247136170Rat
10755499Bp389Blood pressure QTL 3892.61arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)218960362228801039Rat
1298076Bp166Blood pressure QTL 1660.0009arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2136445150202447032Rat
152025245Scl81Serum cholesterol level QTL 813.49blood cholesterol amount (VT:0000180)2122609194206936711Rat
61458Bp10Blood pressure QTL 103.42arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2189020722215287351Rat
7411555Bw132Body weight QTL 1320.001body mass (VT:0001259)body weight gain (CMO:0000420)2223389739249053267Rat
70162Bp63Blood pressure QTL 635.64arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)2169745596214745596Rat
1554319Bmd2Bone mineral density QTL 213.40.0001lumbar vertebra area (VT:0010570)lumbar vertebra cross-sectional area (CMO:0001689)2114837675212549332Rat
1581569Uae32Urinary albumin excretion QTL 320.0001urine protein amount (VT:0005160)urine albumin excretion rate (CMO:0000757)278665619219826953Rat
1302793Bw16Body weight QTL 1650.0001body mass (VT:0001259)body weight (CMO:0000012)2157142209202446871Rat
61467Bp14Blood pressure QTL 142.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)243154682202446871Rat
2317752Glom23Glomerulus QTL 233.6urine protein amount (VT:0005160)urine protein level (CMO:0000591)2193452645245889826Rat
1549836Bss2Bone structure and strength QTL 27.5femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)2211744537249053267Rat
61469Bp16Blood pressure QTL 165.64arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)2169745596214745596Rat
70175BpQTLCluster3Blood pressure QTL cluster 34.128arterial blood pressure trait (VT:2000000)absolute change in systolic blood pressure (CMO:0000607)2135552573202446871Rat
2317885Alcrsp28Alcohol response QTL 282.10.63response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)2212828222249053267Rat
1358900Bw48Body weight QTL 484.88body mass (VT:0001259)body weight (CMO:0000012)2157142078211086598Rat
4889834Pur24Proteinuria QTL 245.80.014urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)2184114274202447032Rat
1359031Bp275Blood pressure QTL 275arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)2185876309219753474Rat
1581499Esta2Estrogen-induced thymic atrophy QTL 2thymus mass (VT:0004954)thymus wet weight (CMO:0000855)2189599258226936289Rat
1331767Hrtrt12Heart rate QTL 123.373heart pumping trait (VT:2000009)heart rate (CMO:0000002)2218414747240841241Rat
1331760Bp206Blood pressure QTL 2063.62454arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)256043031202447032Rat
9589044Scfw1Subcutaneous fat weight QTL 15.80.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)2182171407227171407Rat
8694435Bw166Body weight QTL 16614.080.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)2182171407227171407Rat
631203Gluco14Glucose level QTL 140.0001blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)2206665645219003804Rat
2301966Bp322Blood pressure QTL 3223.58arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2150540301202447032Rat
7207490Bss111Bone structure and strength QTL 1116.4femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)2211744537249053267Rat
1298083Bp158Blood pressure QTL 1582.62arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2189020722215287351Rat
1298080Bp163Blood pressure QTL 1630.02arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)266118275202447032Rat
8662832Vetf7Vascular elastic tissue fragility QTL 73.5aorta elastin amount (VT:0003905)aorta wall extracellular elastin dry weight to aorta wall dry weight ratio (CMO:0002002)281689826221035911Rat
1331745Bp203Blood pressure QTL 2034.377arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2189599258218414891Rat
1298085Bp165Blood pressure QTL 1650.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242804607202447032Rat
8694194Abfw1Abdominal fat weight QTL 111.70.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)2182171407227171407Rat
61366Iddm3Insulin dependent diabetes mellitus QTL 34.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)2189599258234599258Rat
1359022Ppulsi1Prepulse inhibition QTL 13.63prepulse inhibition trait (VT:0003088)acoustic startle response measurement (CMO:0001519)2136916935213594495Rat
1641891Alcrsp17Alcohol response QTL 17response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)2149559561249053267Rat
2299161Iddm33Insulin dependent diabetes mellitus QTL 332.98blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)2206312063220876787Rat
724534Uae6Urinary albumin excretion QTL 610urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)278665619249053267Rat
61374Edpm2Estrogen-dependent pituitary mass QTL 24.420.86pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)276539322202447032Rat
2300189Bmd48Bone mineral density QTL 485.80.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)2179335906224335906Rat
8662843Vetf9Vascular elastic tissue fragility QTL 92.05thoracic aorta molecular composition trait (VT:0010568)aorta wall extracellular elastin dry weight to aorta wall extracellular collagen weight ratio (CMO:0002003)2157142078226277316Rat
1359019Hrtrt19Heart rate QTL 192.9heart pumping trait (VT:2000009)heart rate (CMO:0000002)2219753301226277316Rat
2301408Kidm36Kidney mass QTL 360.002kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)2190613715226808892Rat
631501Bp101Blood pressure QTL 1012.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2150341684202446871Rat
2307174Activ3Activity QTL 34.830.000058locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)2168594495213594495Rat
1598813Memor9Memory QTL 92.7exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)2199341726234244620Rat
8693697Alc36Alcohol consumption QTL 3620.592drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)2217139753236660713Rat
1331794Bp202Blood pressure QTL 2023.66819arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2141194931223265385Rat
71113Cari2Carrageenan-induced inflammation QTL 22.70.009hypodermis integrity trait (VT:0010550)inflammatory exudate volume (CMO:0001429)2141596551202447032Rat
1331805Cm29Cardiac mass QTL 293.50746heart mass (VT:0007028)heart wet weight (CMO:0000069)2141194931223265385Rat
2298479Eau5Experimental allergic uveoretinitis QTL 50.0021uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)2202446871237938339Rat
634308Sach6Saccharin preference QTL 64.9taste sensitivity trait (VT:0001986)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)2112456140212696837Rat
1358917Cm42Cardiac mass QTL 422.82heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423203928301Rat
7207484Bss108Bone structure and strength QTL 1085.3femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)2211744537249053267Rat
2313073Bmd75Bone mineral density QTL 754.10.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)2215377404237938339Rat
724568Uae13Urinary albumin excretion QTL 134.4urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)2143157029210020885Rat
1358913Cm41Cardiac mass QTL 412.73heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423203928301Rat
1300165Rf9Renal function QTL 93.28kidney glomerulus integrity trait (VT:0010546)index of glomerular damage (CMO:0001135)2133914684202447032Rat
738013Alc15Alcohol consumption QTL 154.10.00022consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)2184165752229165752Rat
61398Bp50Blood pressure QTL 504.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2189599258234599258Rat
7207482Bss107Bone structure and strength QTL 1077femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)2211744537249053267Rat
631507Bp105Blood pressure QTL 1050.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2112456140212696837Rat
1641925Alcrsp2Alcohol response QTL 2response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)2149559561221167075Rat
1354609Niddm62Non-insulin dependent diabetes mellitus QTL 624.720.000006insulin secretion trait (VT:0003564)plasma insulin level (CMO:0000342)2150540301202447032Rat
61417Cia10Collagen induced arthritis QTL 103.4joint integrity trait (VT:0010548)experimental arthritis severity measurement (CMO:0001459)2179946951224946951Rat
1354622Kidm16Kidney mass QTL 163kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)281754530222436696Rat
2293833Kiddil8Kidney dilation QTL 82.9kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)2219753301247136170Rat
631266Bp132Blood pressure QTL 1320.0005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)246123260202447032Rat
8694383Bw158Body weight QTL 1587.690.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)2182171407227171407Rat
1598835Anxrr18Anxiety related response QTL 182.98body movement coordination trait (VT:0005424)number of rearing movements in an experimental apparatus (CMO:0001752)2200990457245990457Rat
7488927Bp365Blood pressure QTL 3650.008arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2162765032207765032Rat
1598838Bp290Blood pressure QTL 2901.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2166539266211539266Rat
7488925Bp364Blood pressure QTL 3640.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2160564068205564068Rat
8693622Alc26Alcohol consumption QTL 262.40.667drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)2221136523241305619Rat
2306901Bp337Blood pressure QTL 3370.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2164073756227146641Rat
9587428Epfw6Epididymal fat weight QTL 67.470.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)2223389739249053267Rat
2293844Kiddil7Kidney dilation QTL 73.5kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)2219753301247136170Rat
1354605Rf48Renal function QTL 482.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)274786664206665859Rat
2293084Iddm26Insulin dependent diabetes mellitus QTL 262.9blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)2174930955213594495Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general parental S allele was responsible for improved cognitive performance 1581615