Cpe (carboxypeptidase E) - Rat Genome Database

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Gene: Cpe (carboxypeptidase E) Rattus norvegicus
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Symbol: Cpe
Name: carboxypeptidase E
RGD ID: 2394
Description: Enables carboxypeptidase activity; cobalt ion binding activity; and protein domain specific binding activity. Involved in several processes, including cellular response to dexamethasone stimulus; generation of neurons; and peptide hormone processing. Located in several cellular components, including dense core granule; perikaryon; and synaptic membrane. Human ortholog(s) of this gene implicated in alcohol dependence; coronary artery disease; obesity; and type 2 diabetes mellitus. Orthologous to human CPE (carboxypeptidase E); PARTICIPATES IN melanocortin system pathway; type 1 diabetes mellitus pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,2',5,5'-tetrachlorobiphenyl; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: CARBE; carboxypeptidase H; Cph; enkephalin convertase; MGC93638; prohormone-processing carboxypeptidase
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Candidate Gene For: Niddm38
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81629,796,707 - 29,908,647 (+)NCBIGRCr8
mRatBN7.21625,030,276 - 25,142,231 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1625,030,276 - 25,142,233 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1628,395,455 - 28,506,245 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01631,829,813 - 31,940,599 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01627,784,887 - 27,896,603 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01626,906,716 - 27,014,811 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1626,906,716 - 27,014,813 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01626,785,642 - 26,888,882 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.11626,748,589 - 26,748,986 (+)NCBI
Celera1625,114,655 - 25,226,598 (+)NCBICelera
RH 3.4 Map16298.1RGD
Cytogenetic Map16p13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


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Original Reference(s)
CpeRatalcohol dependence  ISOCPE (Homo sapiens)405650603associated with other drug dependencies and DNA:SNPs:CDS:intron (rs10517844)RGD 
CpeRatalcohol dependence  ISOCPE (Homo sapiens)405650609DNA:SNP:CDS: (rs13706874) (human)RGD 
CpeRatatherosclerosis  ISOCPE (Homo sapiens)405650671mRNA:decreased expression:carotid plaque (human)RGD 
CpeRatBDV Syndrome  ISOCPE (Homo sapiens)405650667DNA:missense more ...RGD 
CpeRatcoronary artery disease severityISOCPE (Homo sapiens)405650688DNA:SNPs:CDS:intron 4 more ...RGD 
CpeRatglioblastoma disease_progressionISOCPE (Homo sapiens)405650684mRNA and protein:decreased expression:brain tumor (human)RGD 
CpeRatMemory Disorders  ISOCpe (Mus musculus)6483325 RGD 
CpeRatmorbid obesity  ISOCPE (Homo sapiens)9068941mRNA:increased expression:visceral abdominal fat:significantly higher expression in visceral fat than subcutaneous fat of morbidly obese subjectsRGDPMID:12530526 and REF_RGD_ID:1626182
CpeRatobesity  ISOCpe (Mus musculus)1626181 RGD 
CpeRatobesity  ISOCPE (Homo sapiens)405650675DNA:SNP:intron (rs1946816 and rs4481204) (human)RGD 
CpeRatobesity no_associationISOCPE (Homo sapiens)1626184 RGD 
CpeRatsteatotic liver disease  ISOCPE (Homo sapiens)405650681mRNA:decreased expression:stomach (human)RGD 
CpeRattype 2 diabetes mellitus onsetISOCPE (Homo sapiens)1626183 RGD 
CpeRattype 2 diabetes mellitus  ISOCPE (Homo sapiens)405650683DNA:SNP:cds (rs1583645) (human)RGD 
CpeRattype 2 diabetes mellitus no_associationISOCPE (Homo sapiens)1626184 RGD 
CpeRatWeight Gain  ISOCPE (Homo sapiens)405650673associated with kidney transplant and DNA:SNP:CDS (rs1946816) (human)RGD 
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Original Reference(s)
CpeRatBDV Syndrome  ISOCPE (Homo sapiens)8554872ClinVar more ...ClinVarPMID:25741868 more ...
CpeRatgenetic disease  ISOCPE (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:28492532 and PMID:35562395
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Original Reference(s)
CpeRatendocrine system disease  ISOCPE (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:15358678
CpeRatInsulin Resistance  ISOCPE (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:15358678
CpeRatLung Neoplasms  ISOCPE (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:27935865
CpeRatobesity  ISOCPE (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:15358678 and PMID:23434795
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Original Reference(s)
CpeRatobesity  ISSCpe (Mus musculus)13592920OMIM:601665MouseDO 
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Original Reference(s)
CpeRatBDV Syndrome  ISOCPE (Homo sapiens)7240710 OMIM 

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Original Reference(s)
CpeRat(-)-epigallocatechin 3-gallate decreases expressionISOCPE (Homo sapiens)6480464epigallocatechin gallate results in decreased expression of CPE mRNACTDPMID:16084531
CpeRat1,2-dimethylhydrazine multiple interactionsISOCpe (Mus musculus)6480464Folic Acid inhibits the reaction [1 and 2-Dimethylhydrazine results in decreased expression of CPE mRNA]CTDPMID:22206623
CpeRat17alpha-ethynylestradiol affects expressionISOCpe (Mus musculus)6480464Ethinyl Estradiol affects the expression of CPE mRNACTDPMID:17555576
CpeRat17alpha-ethynylestradiol decreases expressionEXP 6480464Ethinyl Estradiol results in decreased expression of CPE mRNACTDPMID:12075121 more ...
CpeRat17alpha-ethynylestradiol affects expressionEXP 6480464Ethinyl Estradiol affects the expression of CPE mRNACTDPMID:16079270 and PMID:17351261
CpeRat17alpha-ethynylestradiol multiple interactionsISOCpe (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in decreased expression of CPE mRNACTDPMID:17942748
CpeRat17alpha-ethynylestradiol decreases expressionISOCpe (Mus musculus)6480464Ethinyl Estradiol results in decreased expression of CPE mRNACTDPMID:16174780 and PMID:17942748
CpeRat17beta-estradiol increases expressionISOCPE (Homo sapiens)6480464Estradiol results in increased expression of CPE mRNACTDPMID:19619570
CpeRat17beta-estradiol decreases expressionISOCpe (Mus musculus)6480464Estradiol results in decreased expression of CPE mRNACTDPMID:39298647
CpeRat17beta-estradiol multiple interactionsISOCPE (Homo sapiens)6480464[Estradiol co-treated with Tetrachlorodibenzodioxin] results in decreased expression of CPE mRNACTDPMID:19619570
CpeRat17beta-estradiol affects expressionISOCPE (Homo sapiens)6480464Estradiol affects the expression of CPE mRNACTDPMID:14699072
CpeRat2,2',4,4'-Tetrabromodiphenyl ether affects expressionISOCpe (Mus musculus)64804642 more ...CTDPMID:30294300
CpeRat2,2',5,5'-tetrachlorobiphenyl decreases expressionEXP 64804642 more ...CTDPMID:23829299
CpeRat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOCPE (Homo sapiens)6480464[Estradiol co-treated with Tetrachlorodibenzodioxin] results in decreased expression of CPE mRNACTDPMID:19619570
CpeRat2,3,7,8-tetrachlorodibenzodioxine affects expressionEXP 6480464Tetrachlorodibenzodioxin affects the expression of CPE mRNACTDPMID:32109520 and PMID:34747641
CpeRat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOCpe (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in decreased expression of CPE mRNACTDPMID:17942748
CpeRat2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOCPE (Homo sapiens)6480464Tetrachlorodibenzodioxin results in decreased expression of CPE mRNACTDPMID:19619570
CpeRat2,4-dibromophenyl 2,4,5-tribromophenyl ether affects expressionISOCpe (Mus musculus)64804642 more ...CTDPMID:38648751
CpeRat3,7-dihydropurine-6-thione increases expressionEXP 6480464Mercaptopurine results in increased expression of CPE mRNACTDPMID:23358152
CpeRat3-isobutyl-1-methyl-7H-xanthine multiple interactionsISOCPE (Homo sapiens)6480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol S] results in increased expression of CPE mRNACTDPMID:28628672

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Biological Process
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Original Reference(s)
CpeRatcardiac left ventricle morphogenesis involved_inIEAUniProtKB:P16870 and ensembl:ENSP000003861041600115GO_REF:0000107EnsemblGO_REF:0000107
CpeRatcardiac left ventricle morphogenesis involved_inISOCPE (Homo sapiens)1624291 PMID:19593212RGDPMID:19593212
CpeRatcellular response to dexamethasone stimulus  IMP 405650601 RGD 
CpeRatcellular response to hydrogen peroxide  IMP 405650601 RGD 
CpeRatcellular response to staurosporine  IMP 405650601 RGD 
CpeRatenkephalin processing  IDA 6483103 RGD 
CpeRatinsulin processing  IDA 1626225 RGD 
CpeRatinsulin processing involved_inISOCpe (Mus musculus)1624291MGI:1856395 PMID:9348219RGDPMID:9348219
CpeRatinsulin processing acts_upstream_of_or_withinISOCpe (Mus musculus)1624291MGI:1856395 PMID:7663508RGDPMID:7663508
CpeRatinsulin processing acts_upstream_of_or_withinIEAUniProtKB:Q00493 and ensembl:ENSMUSP000000485551600115GO_REF:0000107EnsemblGO_REF:0000107
CpeRatinsulin processing  IMP 405650689 RGD 
CpeRatinsulin secretion involved in cellular response to glucose stimulus  IMP 405650689 RGD 
CpeRatnegative regulation of branching morphogenesis of a nerve  IMP 6483099 RGD 
CpeRatnegative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway  IMP 405650601 RGD 
CpeRatneuron migration  IMP 405650669 RGD 
CpeRatneuron projection arborization  IMP 405650669 RGD 
CpeRatpeptide catabolic process  IDA 1626225 RGD 
CpeRatpeptide hormone processing  TAS 727682 RGD 
CpeRatpeptide hormone secretion acts_upstream_of_or_withinISOCpe (Mus musculus)1624291MGI:1856395 PMID:16219686RGDPMID:16219686
CpeRatpeptide hormone secretion acts_upstream_of_or_withinIEAUniProtKB:Q00493 and ensembl:ENSMUSP000000485551600115GO_REF:0000107EnsemblGO_REF:0000107
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Cellular Component
1 to 20 of 27 rows

  
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Original Reference(s)
CpeRatcytoplasmic vesicle located_inIEAUniProtKB-KW:KW-09681600115GO_REF:0000043UniProtGO_REF:0000043
CpeRatdendrite  IDA 2308893 RGD 
CpeRatdendrite located_inIDA 6483326PMID:19166515BHF-UCL 
CpeRatdense core granule  IDA 6483099 RGD 
CpeRatextracellular region  IDA 6483348 RGD 
CpeRatextracellular region located_inIEAUniProtKB-KW:KW-09641600115GO_REF:0000043UniProtGO_REF:0000043
CpeRatextracellular region located_inIEAUniProtKB-SubCell:SL-02431600115GO_REF:0000044UniProtGO_REF:0000044
CpeRatextracellular space  IDA 1626217 RGD 
CpeRatextracellular space is_active_inIBAMGI:1934569 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
CpeRatGolgi apparatus located_inISOCPE (Homo sapiens)1624291 PMID:19166515RGDPMID:19166515
CpeRatGolgi apparatus located_inIDA 6483326PMID:19166515BHF-UCL 
CpeRatGolgi apparatus located_inIEAUniProtKB:P16870 and ensembl:ENSP000003861041600115GO_REF:0000107EnsemblGO_REF:0000107
CpeRatmembrane located_inIEAUniProtKB-KW:KW-04721600115GO_REF:0000043UniProtGO_REF:0000043
CpeRatneuronal cell body  IDA 2308893 RGD 
CpeRatnucleus  IDA 405650601western blot assay��MMO:0000669 and ex vivo light microscopy with immunohistochemistry MMO:0000538RGD 
CpeRatperikaryon  IDA 2308893 RGD 
CpeRatperikaryon located_inIDA 6483326PMID:19166515BHF-UCL 
CpeRatsecretory granule  IDA 1626225 RGD 
CpeRatsecretory granule is_active_inISOCpe (Mus musculus)1624291 PMID:9348219RGDPMID:9348219
CpeRatsecretory granule is_active_inIEAUniProtKB:Q00493 and ensembl:ENSMUSP000000485551600115GO_REF:0000107EnsemblGO_REF:0000107
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Molecular Function
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Original Reference(s)
CpeRatcarboxypeptidase activity  IDA 1626225 RGD 
CpeRatcarboxypeptidase activity enablesIEAUniProtKB:Q00493 and ensembl:ENSMUSP000000485551600115GO_REF:0000107EnsemblGO_REF:0000107
CpeRatcarboxypeptidase activity enablesISOCpe (Mus musculus)1624291MGI:1856395 PMID:7663508RGDPMID:7663508
CpeRatcarboxypeptidase activity enablesIEAUniProtKB-KW:KW-01211600115GO_REF:0000043UniProtGO_REF:0000043
CpeRatcell adhesion molecule binding enablesIEAUniProtKB:P16870 and ensembl:ENSP000003861041600115GO_REF:0000107EnsemblGO_REF:0000107
CpeRatcell adhesion molecule binding enablesISOCPE (Homo sapiens)1624291UniProtKB:Q9UHC6 and PMID:19166515RGDPMID:19166515
CpeRatcobalt ion binding  IMP 1626225 RGD 
CpeRathydrolase activity enablesIEAUniProtKB-KW:KW-03781600115GO_REF:0000043UniProtGO_REF:0000043
CpeRatmetal ion binding enablesIEAUniProtKB-KW:KW-04791600115GO_REF:0000043UniProtGO_REF:0000043
CpeRatmetallocarboxypeptidase activity enablesIEAEC:3.4.17.101600115GO_REF:0000003UniProtGO_REF:0000003
CpeRatmetallocarboxypeptidase activity enablesIEAUniProtKB:Q00493 and ensembl:ENSMUSP000000485551600115GO_REF:0000107EnsemblGO_REF:0000107
CpeRatmetallocarboxypeptidase activity enablesIEAInterPro:IPR0008341600115GO_REF:0000002InterProGO_REF:0000002
CpeRatmetallocarboxypeptidase activity enablesISOCpe (Mus musculus)1624291MGI:1856395 PMID:9348219RGDPMID:9348219
CpeRatmetallocarboxypeptidase activity enablesIBAFB:FBgn0004648 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
CpeRatmetallopeptidase activity enablesIEAUniProtKB-KW:KW-04821600115GO_REF:0000043UniProtGO_REF:0000043
CpeRatneurexin family protein binding enablesIEAUniProtKB:P16870 and ensembl:ENSP000003861041600115GO_REF:0000107EnsemblGO_REF:0000107
CpeRatneurexin family protein binding enablesISOCPE (Homo sapiens)1624291UniProtKB:Q9UHC6 and PMID:19166515RGDPMID:19166515
CpeRatpeptidase activity enablesIEAUniProtKB-KW:KW-06451600115GO_REF:0000043UniProtGO_REF:0000043
CpeRatprotein binding  IPIScg3 (Mus musculus)1626212at the periphery of secretory granules in pituitary mammotropes and pancreatic beta cellsRGD 
CpeRatprotein binding enablesISOCpe (Mus musculus)1624291PR:P01193 more ...RGDPMID:16219686
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RGD Manual Annotations


  
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Original Reference(s)
CpeRatmelanocortin system pathway   ISS 1357926 RGD 

Imported Annotations - KEGG (archival)

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Original Reference(s)
CpeRattype 1 diabetes mellitus pathway  IEA 6907045 KEGGrno:04940

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#
Reference Title
Reference Citation
1. Immunohistochemical expression and colocalization of somatostatin, carboxypeptidase-E and prohormone convertases 1 and 2 in rat brain. Billova S, etal., Neuroscience. 2007 Jun 29;147(2):403-18. Epub 2007 Jun 1.
2. BDV Syndrome: An Emerging Syndrome With Profound Obesity and Neurodevelopmental Delay Resembling Prader-Willi Syndrome. Bosch E, etal., J Clin Endocrinol Metab. 2021 Nov 19;106(12):3413-3427. doi: 10.1210/clinem/dgab592.
3. NOS1AP regulates dendrite patterning of hippocampal neurons through a carboxypeptidase E-mediated pathway. Carrel D, etal., J Neurosci. 2009 Jun 24;29(25):8248-58.
4. An association study revealed substantial effects of dominance, epistasis and substance dependence co-morbidity on alcohol dependence symptom count. Chen G, etal., Addict Biol. 2017 Nov;22(6):1475-1485. doi: 10.1111/adb.12402. Epub 2016 May 5.
5. Missense polymorphism in the human carboxypeptidase E gene alters enzymatic activity. Chen H, etal., Hum Mutat. 2001 Aug;18(2):120-31.
6. The insulin-secretory-granule carboxypeptidase H. Purification and demonstration of involvement in proinsulin processing. Davidson HW and Hutton JC, Biochem J. 1987 Jul 15;245(2):575-82.
7. Disruption of a receptor-mediated mechanism for intracellular sorting of proinsulin in familial hyperproinsulinemia. Dhanvantari S, etal., Mol Endocrinol. 2003 Sep;17(9):1856-67. doi: 10.1210/me.2002-0380. Epub 2003 Jun 26.
8. Genome-wide association study of alcohol dependence implicates a region on chromosome 11. Edenberg HJ, etal., Alcohol Clin Exp Res. 2010 May;34(5):840-52. doi: 10.1111/j.1530-0277.2010.01156.x. Epub 2010 Mar 1.
9. Isolation and sequence analysis of cDNA for rat carboxypeptidase E [EC 3.4.17.10], a neuropeptide processing enzyme. Fricker LD, etal., Mol Endocrinol 1989 Apr;3(4):666-73.
10. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
11. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
12. Carboxypeptidase B-like converting enzyme activity in secretory granules of rat pituitary. Hook VY and Loh YP, Proc Natl Acad Sci U S A. 1984 May;81(9):2776-80.
13. Secretogranin III binds to cholesterol in the secretory granule membrane as an adapter for chromogranin A. Hosaka M, etal., J Biol Chem. 2004 Jan 30;279(5):3627-34. Epub 2003 Nov 3.
14. Interaction between secretogranin III and carboxypeptidase E facilitates prohormone sorting within secretory granules. Hosaka M, etal., J Cell Sci. 2005 Oct 15;118(Pt 20):4785-95.
15. The "go or grow" potential of gliomas is linked to the neuropeptide processing enzyme carboxypeptidase E and mediated by metabolic stress. Höring E, etal., Acta Neuropathol. 2012 Jul;124(1):83-97. doi: 10.1007/s00401-011-0940-x. Epub 2012 Jan 15.
16. Association of the mutation for the human carboxypeptidase E gene exon 4 with the severity of coronary artery atherosclerosis. Jia EZ, etal., Mol Biol Rep. 2009 Feb;36(2):245-54. doi: 10.1007/s11033-007-9173-4. Epub 2007 Dec 16.
17. Structural characterization of the rat carboxypeptidase-E gene. Jung YK, etal., Mol Endocrinol 1991 Sep;5(9):1257-68.
18. High-density rat radiation hybrid maps containing over 24,000 SSLPs, genes, and ESTs provide a direct link to the rat genome sequence. Kwitek AE, etal., Genome Res. 2004 Apr;14(4):750-7
19. Genetic associations of type 2 diabetes with islet amyloid polypeptide processing and degrading pathways in asian populations. Lam VK, etal., PLoS One. 2013 Jun 11;8(6):e62378. doi: 10.1371/journal.pone.0062378. Print 2013.
20. Genetic association analysis of 30 genes related to obesity in a European American population. Li P, etal., Int J Obes (Lond). 2014 May;38(5):724-9. doi: 10.1038/ijo.2013.140. Epub 2013 Jul 31.
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PMID:1955501   PMID:12477932   PMID:14661109   PMID:14715715   PMID:15181368   PMID:18573344   PMID:19428990   PMID:19593212   PMID:22824791   PMID:23376485   PMID:23533145   PMID:23941827  
PMID:24006456   PMID:34266900  



Cpe
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81629,796,707 - 29,908,647 (+)NCBIGRCr8
mRatBN7.21625,030,276 - 25,142,231 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1625,030,276 - 25,142,233 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1628,395,455 - 28,506,245 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01631,829,813 - 31,940,599 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01627,784,887 - 27,896,603 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01626,906,716 - 27,014,811 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1626,906,716 - 27,014,813 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01626,785,642 - 26,888,882 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.11626,748,589 - 26,748,986 (+)NCBI
Celera1625,114,655 - 25,226,598 (+)NCBICelera
RH 3.4 Map16298.1RGD
Cytogenetic Map16p13NCBI
CPE
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384165,379,008 - 165,498,547 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4165,361,194 - 165,498,547 (+)EnsemblGRCh38hg38GRCh38
GRCh374166,300,160 - 166,419,699 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 364166,519,538 - 166,638,926 (+)NCBINCBI36Build 36hg18NCBI36
Build 344166,657,698 - 166,777,081NCBI
Celera4163,635,528 - 163,754,911 (+)NCBICelera
Cytogenetic Map4q32.3NCBI
HuRef4162,051,907 - 162,171,495 (+)NCBIHuRef
CHM1_14166,276,542 - 166,396,001 (+)NCBICHM1_1
T2T-CHM13v2.04168,724,998 - 168,844,639 (+)NCBIT2T-CHM13v2.0
Cpe
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39865,045,576 - 65,146,143 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl865,045,576 - 65,146,088 (-)EnsemblGRCm39 Ensembl
GRCm38864,592,542 - 64,693,109 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl864,592,542 - 64,693,054 (-)EnsemblGRCm38mm10GRCm38
MGSCv37867,071,339 - 67,171,837 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36867,484,734 - 67,585,232 (-)NCBIMGSCv36mm8
Celera867,161,674 - 67,256,578 (-)NCBICelera
Cytogenetic Map8B3.1NCBI
cM Map832.3NCBI
Cpe
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540339,862,191 - 39,971,902 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540339,862,893 - 39,971,902 (-)NCBIChiLan1.0ChiLan1.0
CPE
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v23163,128,657 - 163,248,939 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan14163,486,663 - 163,606,756 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v04157,575,157 - 157,705,173 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14169,658,534 - 169,781,449 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4169,659,007 - 169,780,739 (+)Ensemblpanpan1.1panPan2
CPE
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11561,321,588 - 61,422,608 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1561,321,227 - 61,414,789 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1561,629,383 - 61,730,508 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01562,182,343 - 62,284,386 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1562,182,273 - 62,285,019 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11561,363,671 - 61,466,350 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01561,406,929 - 61,508,661 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01561,801,266 - 61,902,997 (+)NCBIUU_Cfam_GSD_1.0
Cpe
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494317,928,608 - 18,038,671 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936555530,307 - 641,905 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936555531,842 - 641,905 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CPE
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl843,565,054 - 43,696,268 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1843,568,744 - 43,695,475 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2845,475,586 - 45,592,181 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CPE
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.17111,747,265 - 111,867,548 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl7111,747,172 - 111,868,754 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603791,600,315 - 91,727,319 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cpe
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475811,463,012 - 11,604,224 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475811,464,418 - 11,603,660 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Cpe
955 total Variants

Predicted Target Of
Summary Value
Count of predictions:384
Count of miRNA genes:216
Interacting mature miRNAs:268
Transcripts:ENSRNOT00000064297
Prediction methods:Microtar, Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 28 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
631561Hcuc2Hepatic copper content QTL 22.8liver copper amount (VT:0003065)liver total copper weight (CMO:0001507)16139533949Rat
1582235Insul8Insulin level QTL 83.30.0063blood insulin amount (VT:0001560)calculated serum insulin level (CMO:0000359)16126727669Rat
70215Niddm29Non-insulin dependent diabetes mellitus QTL 293.54blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)161900443575226532Rat
2307172Activ4Activity QTL 43.710.00023locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)16133418960Rat
2302057Pia29Pristane induced arthritis QTL 293.60.001blood autoantibody amount (VT:0003725)serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)162173597566735975Rat
1354584Despr6Despair related QTL 63.10.0067locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16139533930Rat
2302380Slep6Serum leptin concentration QTL 63.36blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)16132139025Rat
737819Hcas4Hepatocarcinoma susceptibility QTL 44.43liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)16422760946975965Rat
9590151Scort8Serum corticosterone level QTL 88.450.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)16130836262Rat
1354625Despr7Despair related QTL 73.160.016locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16144977551Rat

1 to 10 of 28 rows
D16Arb6  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21625,029,330 - 25,029,518 (+)MAPPERmRatBN7.2
Rnor_6.01626,905,771 - 26,905,958NCBIRnor6.0
Rnor_5.01626,784,697 - 26,784,884UniSTSRnor5.0
RGSC_v3.41626,747,646 - 26,747,834RGDRGSC3.4
RGSC_v3.41626,747,647 - 26,747,834UniSTSRGSC3.4
RGSC_v3.11626,747,644 - 26,747,832RGD
Celera1625,113,710 - 25,113,897UniSTS
FHH x ACI Map1615.4998UniSTS
FHH x ACI Map1615.4998RGD
Cytogenetic Map16p13UniSTS
RH94584  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21625,142,035 - 25,142,185 (+)MAPPERmRatBN7.2
Rnor_6.01627,014,616 - 27,014,765NCBIRnor6.0
Rnor_5.01626,888,687 - 26,888,836UniSTSRnor5.0
Celera1625,226,403 - 25,226,552UniSTS
RH 3.4 Map16298.1UniSTS
Cytogenetic Map16p13UniSTS
RH94773  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21625,141,951 - 25,142,211 (+)MAPPERmRatBN7.2
Rnor_6.01627,014,532 - 27,014,791NCBIRnor6.0
Rnor_5.01626,888,603 - 26,888,862UniSTSRnor5.0
Celera1625,226,319 - 25,226,578UniSTS
Cytogenetic Map16p13UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000064297   ⟹   ENSRNOP00000061172
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1625,030,276 - 25,142,233 (+)Ensembl
Rnor_6.0 Ensembl1626,906,716 - 27,014,813 (+)Ensembl
RefSeq Acc Id: NM_013128   ⟹   NP_037260
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81629,796,707 - 29,908,647 (+)NCBI
mRatBN7.21625,030,276 - 25,142,231 (+)NCBI
Rnor_6.01626,906,716 - 27,014,811 (+)NCBI
Rnor_5.01626,785,642 - 26,888,882 (+)NCBI
Celera1625,114,655 - 25,226,598 (+)RGD
Sequence:
1 to 11 of 11 rows
Protein RefSeqs NP_037260 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA40873 (Get FASTA)   NCBI Sequence Viewer  
  AAA40875 (Get FASTA)   NCBI Sequence Viewer  
  AAA40957 (Get FASTA)   NCBI Sequence Viewer  
  AAH85762 (Get FASTA)   NCBI Sequence Viewer  
  CAA35768 (Get FASTA)   NCBI Sequence Viewer  
  EDL75985 (Get FASTA)   NCBI Sequence Viewer  
  EDL75986 (Get FASTA)   NCBI Sequence Viewer  
  EDL75987 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000107153
GenBank Protein P15087 (Get FASTA)   NCBI Sequence Viewer  
1 to 11 of 11 rows
RefSeq Acc Id: NP_037260   ⟸   NM_013128
- Peptide Label: precursor
- UniProtKB: P15087 (UniProtKB/Swiss-Prot),   D4A8X4 (UniProtKB/TrEMBL),   Q5U322 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000061172   ⟸   ENSRNOT00000064297
Name Modeler Protein Id AA Range Protein Structure
AF-P15087-F1-model_v2 AlphaFold P15087 1-476 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13700068
Promoter ID:EPDNEW_R10590
Type:initiation region
Name:Cpe_1
Description:carboxypeptidase E
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01626,906,698 - 26,906,758EPDNEW


1 to 32 of 32 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-11626 BioCyc
Ensembl Genes ENSRNOG00000043387 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000162741 ENTREZGENE
Gene3D-CATH Carboxypeptidase-like, regulatory domain UniProtKB/Swiss-Prot
  Zn peptidases UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7193151 IMAGE-MGC_LOAD
InterPro CarboxyPept-like_regulatory UniProtKB/Swiss-Prot
  M14_CPE_CPD UniProtKB/Swiss-Prot
  Peptidase_M14 UniProtKB/Swiss-Prot
  Peptidase_M14_domain UniProtKB/Swiss-Prot
KEGG Report rno:25669 UniProtKB/Swiss-Prot
MGC_CLONE MGC:93638 IMAGE-MGC_LOAD
NCBI Gene 25669 ENTREZGENE
PANTHER CARBOXYPEPTIDASE E UniProtKB/Swiss-Prot
  PROTEASE M14 CARBOXYPEPTIDASE UniProtKB/Swiss-Prot
Pfam CarboxypepD_reg UniProtKB/Swiss-Prot
  Peptidase_M14 UniProtKB/Swiss-Prot
PhenoGen Cpe PhenoGen
PRINTS CRBOXYPTASEA UniProtKB/Swiss-Prot
PROSITE CARBOXYPEPT_ZN_1 UniProtKB/Swiss-Prot
  CARBOXYPEPT_ZN_2 UniProtKB/Swiss-Prot
  PEPTIDASE_M14 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000043387 RatGTEx
SMART Zn_pept UniProtKB/Swiss-Prot
Superfamily-SCOP SSF49464 UniProtKB/Swiss-Prot
  Zn-dependent exopeptidases UniProtKB/Swiss-Prot
UniProt A6KFP3_RAT UniProtKB/TrEMBL
  A6KFP5_RAT UniProtKB/TrEMBL
  CBPE_RAT UniProtKB/Swiss-Prot
  D4A8X4 ENTREZGENE
  P15087 ENTREZGENE
  Q5U322 ENTREZGENE, UniProtKB/TrEMBL
1 to 32 of 32 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2002-06-10 Cpe  Carboxypeptidase E      Symbol and Name status set to approved 70586 APPROVED