Pia29 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Pia29 (Pristane induced arthritis QTL 29) Rattus norvegicus

Symbol: Pia29
Name: Pristane induced arthritis QTL 29
RGD ID: 2302057
Previously known as: Rf3
Trait: blood autoantibody amount   (VT:0003725)    
Measurement Type: serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum   (CMO:0002111)    
LOD Score: 3.6
P Value: 0.001
Variance: Not Available
Inheritance Type: recessive
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21621,735,975 - 66,735,975RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01624,846,541 - 69,846,541RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01624,569,673 - 69,569,673RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41624,934,312 - 69,934,312RGD_MAPPER_PIPELINERGSC3.4
Cross Type: intercross
Strains Crossed: DA/ZtmRhd E3/ZtmRhd 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition
pristane  (IDA)

Measurement Method

Vertebrate Trait

Rat Strain
DA/ZtmRhd  (IEA)
E3/ZtmRhd  (IEA)

References

References - curated
# Reference Title Reference Citation
1. The genetic control of rheumatoid factor production in a rat model of rheumatoid arthritis. Wernhoff P, etal., Arthritis Rheum. 2003 Dec;48(12):3584-96.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1559968Psd3pleckstrin and Sec7 domain containing 3162146564322035846Rat
1307575Nat3N-acetyltransferase 3162214960522175962Rat
70492Nat2N-acetyltransferase 2162220736222238513Rat
70490Nat1N-acetyltransferase 1162221821722238516Rat
2320284Hmgb2-ps3high mobility group box 2, pseudogene 3162223165522232574Rat
1592045Golga4-ps1golgin A4, pseudogene 1162229267222294179Rat
40963402LOC120097605small nucleolar RNA SNORA17162241018722410318Rat
7533746Envl-ps13MLV-related proviral Env polyprotein-like, pseudogene 13162245256522465004Rat
41321860LOC120097535uncharacterized LOC120097535162253420122547804Rat
1584009Eno1-ps8enolase 1, pseudogene 8162257410322575435Rat
41281915LOC120097582small nucleolar RNA MBII-202162268928122689366Rat
41219039LOC120097599small nucleolar RNA SNORA17162279917522799306Rat
1306802Naf1nuclear assembly factor 1 ribonucleoprotein162283758322868320Rat
3198Npy1rneuropeptide Y receptor Y1162303778823047330Rat
3199Npy5rneuropeptide Y receptor Y5162305542723063384Rat
41334314LOC120097668U7 small nuclear RNA162316628223166342Rat
1304767Tktl2transketolase-like 2162320246023209741Rat
1305222Tma16translation machinery associated 16 homolog162323668623252706Rat
1305148Marchf1membrane associated ring-CH-type finger 1162325555124114290Rat
9442087LOC10369392360S ribosomal protein L22-like 1 pseudogene162336959723370002Rat
41187174LOC120097654U6 spliceosomal RNA162340331023403429Rat
41248309LOC120097418uncharacterized LOC120097418162342454223432131Rat
7557665Bnip3-ps4BCL2 interacting protein 3, pseudogene 4162344414023444821Rat
1589889Gapdh-ps2glyceraldehyde-3-phosphate dehydrogenase, pseudogene 2162402997924031270Rat
41114395LOC120097656U6 spliceosomal RNA162406722224067324Rat
41075555LOC120097645U6 spliceosomal RNA162429845524298561Rat
1582825Mrps25-ps1mitochondrial ribosomal protein S25, pseudogene 1162437145924371971Rat
1592044Tuba1b-ps7tubulin, alpha 1B, pseudogene 7162460153824603230Rat
1597370Gcsh-ps1glycine cleavage system protein H, pseudogene 1162464769524660538Rat
9299863Apelaapelin receptor early endogenous ligand162469435624703466Rat
6498266Trim60-ps1tripartite motif-containing 60, pseudogene 1162471300824714402Rat
2324264Trim60tripartite motif containing 60162472277024724188Rat
1565534Trim75l-ps1tripartite motif-containing 75 like, pseudogene 1162473600924737192Rat
1309341Tmem192transmembrane protein 192162474016624760994Rat
1306388Klhl2kelch-like family member 2162486074424973348Rat
41280002LOC120097650U6 spliceosomal RNA162490367824903783Rat
620281Msmo1methylsterol monooxygenase 1162498068024997927Rat
2394Cpecarboxypeptidase E162503027625142231Rat
1596975Grlf1-ps1glucocorticoid receptor DNA binding factor 1, pseudogene 1162534511025348729Rat
41262859LOC120097634U4 spliceosomal RNA162538368325383821Rat
9212565LOC103693926uncharacterized LOC103693926162539810925441053Rat
1306120Tll1tolloid-like 1162550914625710330Rat
11440895LOC108348393uncharacterized LOC108348393162551180525586188Rat
11482878LOC108348392high mobility group protein B1 pseudogene162558097225585046Rat
41119181LOC120097612small nucleolar RNA SNORA17162581634625816463Rat
1359166Npm1-ps1nucleophosmin 1, pseudogene 1162613664526137912Rat
1305672Spock3SPARC/osteonectin, cwcv and kazal like domains proteoglycan 3162638289526815943Rat
41350617LOC120097671small nucleolar RNA SNORA70162665164726651780Rat
41066745LOC120097652U6 spliceosomal RNA162749264227492748Rat
2321505Rps3a-ps2ribosomal protein S3a, pseudogene 2162765103827653479Rat
1560956Anxa10annexin A10162773871227805648Rat
41078313Ddx60l1DEXD/H-box helicase 60 like 1162784114327950765Rat
9113796LOC103693929uncharacterized LOC103693929162795101227958299Rat
1359390Palldl1palladin-like 1162798131528143129Rat
41137441Trnat-agu16transfer RNA threonine (anticodon AGU) 16162800117028001251Rat
1560014Ddx60DEXD/H-box helicase 60162807700028197903Rat
41107920LOC120097508uncharacterized LOC120097508162819795328206019Rat
2322545Palldpalladin, cytoskeletal associated protein162822800628621349Rat
41145753LOC120097383uncharacterized LOC120097383162849692528518892Rat
40939094LOC120097662U6 spliceosomal RNA162851180028511903Rat
727826Cbr4carbonyl reductase 4162862992828684230Rat
735154Sh3rf1SH3 domain containing ring finger 1162873552228901261Rat
1309375Nek1NIMA-related kinase 1162899822929125426Rat
621219Clcn3chloride voltage-gated channel 3162912715229200133Rat
11362354LOC108348394ATP synthase subunit g, mitochondrial pseudogene162916924929172822Rat
2322491Cbx3l1chromobox 3 like 1162918683329188609Rat
1311747Hpf1histone PARylation factor 1162920374929219651Rat
2320869Stambp-ps1Stam binding protein, pseudogene 1162929749329298983Rat
1592038Pin1-ps1peptidylprolyl cis/trans isomerase, NIMA-interacting 1, pseudogene 1162933329129335321Rat
1592037Ppia-ps13peptidylprolyl isomerase A, pseudogene 13162938638529387079Rat
1311274Mfap3lmicrofibril associated protein 3 like162941164329454665Rat
2948Aadataminoadipate aminotransferase162950939229544332Rat
2320536Rpl18-ps1ribosomal protein L18, pseudogene 1162959269329593236Rat
2320482Slc25a13-ps1solute carrier family 25 member 13, pseudogene 1162959429929755023Rat
7569603LOC102548002uncharacterized LOC102548002163008592030132216Rat
41220637Trnap-agg50transfer RNA proline (anticodon AGG) 50163030970130309782Rat
41402384LOC120097412uncharacterized LOC120097412163055679230562901Rat
7660333Cnn3-ps2calponin 3, pseudogene 2163058011230581485Rat
2322336Hmgn2-ps4high mobility group nucleosomal binding domain 2, pseudogene 4163063328730634512Rat
41229067LOC120097643U6 spliceosomal RNA163066760130667707Rat
41237497LOC120097434uncharacterized LOC120097434163097355530980738Rat
1564773Galntl6polypeptide N-acetylgalactosaminyltransferase-like 6163119288032443979Rat
41055566LOC120097591small nucleolar RNA SNORA48163133728431337427Rat
6487726LOC100912321myeloid-associated differentiation marker-like163143783131441338Rat
41246983LOC120097629U6atac minor spliceosomal RNA163184373331843853Rat
1561098Rps27a-ps14ribosomal protein S27a, pseudogene 14163184493931845467Rat
40955683LOC120097640U4 spliceosomal RNA163190301731903155Rat
620362Galnt7polypeptide N-acetylgalactosaminyltransferase 7163257864332703189Rat
41351695LOC120097422uncharacterized LOC120097422163258156632612495Rat
41039845LOC120097421uncharacterized LOC120097421163260078032636371Rat
41003768LOC120097593small nucleolar RNA SNORA48163270546332705605Rat
69291Hmgb2high mobility group box 2163271065132713230Rat
1595501Sap30Sin3A associated protein 30163274777732753114Rat
68377Scrg1stimulator of chondrogenesis 1163276002832788299Rat
11380833Trnae-uuc9transfer RNA glutamic acid (anticodon UUC) 9163276277232762843Rat
7701467LOC102548719uncharacterized LOC102548719163281406532816888Rat
9269843LOC103693946uncharacterized LOC103693946163290793832910025Rat
621207Hand2heart and neural crest derivatives expressed 2163291744832920791Rat
11444389LOC108353084glyceraldehyde-3-phosphate dehydrogenase pseudogene163296322632965216Rat
9114442LOC10369424260S ribosomal protein L7 pseudogene163299528132996164Rat
1588597Eno1-ps26enolase 1, pseudogene 26163310288533103912Rat
41268023LOC120097649U6 spliceosomal RNA163317989333179999Rat
1594133Pebp1-ps1phosphatidylethanolamine binding protein 1, pseudogene 1163321569833216689Rat
41083644LOC120097641U4 spliceosomal RNA163363024933630336Rat
1307596Fbxo8F-box protein 8163366530533711215Rat
1308517Cep44centrosomal protein 44163371154833733226Rat
41097200LOC120097602small nucleolar RNA SNORA17163374828033748411Rat
1595671Riox2-ps4ribosomal oxygenase 2, pseudogene 4163387273633874163Rat
620087Hpgd15-hydroxyprostaglandin dehydrogenase163398626534024228Rat
1584050Hmgb1-ps8high-mobility group box 1, pseudogene 8163402848734030715Rat
1591754Esf1-ps1ESF1 nucleolar pre-rRNA processing protein, pseudogene 1163417872634180443Rat
621229Glra3glycine receptor, alpha 3163419993734848773Rat
2319506Elf2-ps1E74 like ETS transcription factor 2, pseudogene 1163492501134938009Rat
11383954LOC108353114glyceraldehyde-3-phosphate dehydrogenase pseudogene163526361035265145Rat
2318769LOC100362114hypothetical LOC100362114163537080335372808Rat
41203672Pcbp4-ps3poly(rC) binding protein 4, pseudogene 3163559446935595438Rat
41364685Pym1-ps11PYM homolog 1, exon junction complex associated factor, pseudogene 11163564611935646695Rat
1565331Rcn1-ps15reticulocalbin 1, pseudogene 15163566327435664803Rat
6491257Hprt1-ps1hypoxanthine phosphoribosyltransferase 1, pseudogene 1163584100635841628Rat
41247947LOC120097466uncharacterized LOC120097466163584879635855983Rat
11489697LOC108351592uncharacterized LOC108351592163586018735901217Rat
6494993Ptp4a1-ps3protein tyrosine phosphatase 4A1, pseudogene 3163587531935877346Rat
1596928Tgap1l7GTPase activating protein testicular GAP1 like 7163595351535983016Rat
41362298Naa11-ps20N(alpha)-acetyltransferase 11, NatA catalytic subunit, pseudogene 20163598438335985085Rat
41396311Rcn1-ps9reticulocalbin 1, pseudogene 9163623890436239854Rat
6486900Pym1-ps3PYM homolog 1, exon junction complex associated factor, pseudogene 3163625509336255686Rat
40961205Pym1-ps12PYM homolog 1, exon junction complex associated factor, pseudogene 12163629928136299876Rat
41285393LOC120097541uncharacterized LOC120097541163630240236307708Rat
41231906Trnav-aac21transfer RNA valine (anticodon AAC) 21163649714136497213Rat
40973435LOC1200976395S ribosomal RNA163657817336578291Rat
6499367LOC100910324uncharacterized LOC100910324163658356636601503Rat
6499950Adam21ADAM metallopeptidase domain 21163662532436627657Rat
41118380LOC120097473uncharacterized LOC120097473163663464836659417Rat
631368Gpm6aglycoprotein m6a163664128236973377Rat
41205149LOC120097655U6 spliceosomal RNA163665309536653200Rat
1589657Pnn-ps1pinin, desmosome associated protein, pseudogene 1163686334336867784Rat
1590843Wdr17WD repeat domain 17163705992337191125Rat
1303065Spata4spermatogenesis associated 4163721380937223169Rat
1565973Asb5ankyrin repeat and SOCS box-containing 5163723786937305207Rat
1588184Spcs3signal peptidase complex subunit 3163730535837310792Rat
40933446LOC120097648U6 spliceosomal RNA163743231037432413Rat
41264711LOC120097553pancreatic progenitor cell differentiation and proliferation factor-like163769834737698581Rat
619800Vegfcvascular endothelial growth factor C163771225137827845Rat
41140865Trnaa-agc85transfer RNA alanine (anticodon AGC) 85163790152437901605Rat
7507107LOC102549910uncharacterized LOC102549910163791900937957322Rat
2324291Kansl2-ps3KAT8 regulatory NSL complex subunit 2, pseudogene 3163801742638018649Rat
41196543LOC120097600small nucleolar RNA SNORA17163829999438300125Rat
1310562Neil3nei-like DNA glycosylase 3163835930538418528Rat
1309646Agaaspartylglucosaminidase163850466138516607Rat
41327122LOC120097669U7 small nuclear RNA163854055538540616Rat
1586989Pabpc1-ps1poly(A) binding protein, cytoplasmic 1, pseudogene 1163888665038889188Rat
1585878Kics2-ps1KICSTOR subunit 2, pseudogene 1163888932438893550Rat
41063175LOC120097622small nucleolar RNA SNORA17163914552939145633Rat
41325054LOC120097659U6 spliceosomal RNA163916815439168255Rat
1587354Zmynd8-ps2zinc finger, MYND-type containing 8, pseudogene 2163935163639353314Rat
1560648Park7-ps2Parkinsonism associated deglycase, pseudogene 2163972891039729268Rat
41279863LOC120097491uncharacterized LOC120097491163990142039904916Rat
1585819Hdac1-ps7Histone deacetylase 1, pseudogene 7164025972540299510Rat
9350183LOC103693955mitochondrial import receptor subunit TOM20 homolog pseudogene164062441040624826Rat
11444080LOC108353100peptidyl-prolyl cis-trans isomerase A pseudogene164114352941144012Rat
1306641Tenm3teneurin transmembrane protein 3164125190943978594Rat
41330846LOC120097405uncharacterized LOC120097405164188914641899831Rat
41336930LOC120097590U11 spliceosomal RNA164213117342131306Rat
40956051LOC120097606small nucleolar RNA SNORA17164323777243237902Rat
7688695LOC102552563uncharacterized LOC102552563164398378543991280Rat
41009377Mif-ps4macrophage migration inhibitory factor, pseudogene 4164405798844058997Rat
1359671DctddCMP deaminase164406695244098654Rat
41383168LOC120097446uncharacterized LOC120097446164416121244164003Rat
1596760Rps15a-ps8ribosomal protein S15a, pseudogene 8164417052644170972Rat
7540575LOC102551022uncharacterized LOC102551022164419602144205176Rat
1559427Wwc2WW and C2 domain containing 2164425837244421815Rat
1305271Cldn22claudin 22164442234444423370Rat
1562043Cldn24claudin 24164442481044425472Rat
7594186LOC102551260uncharacterized LOC102551260164449135344497591Rat
1305302Cdkn2aipCDKN2A interacting protein164453614744546216Rat
1307347Ing2inhibitor of growth family, member 2164457359244584180Rat
1587353Ndufaf7-ps1NADH:ubiquinone oxidoreductase complex assembly factor 7, pseudogene 1164461422644615701Rat
1560302Erh-ps2ERH, mRNA splicing and mitosis factor, pseudogene 2164463136644632601Rat
1564132Rwdd4RWD domain containing 4164471469844733090Rat
1309765Trappc11trafficking protein particle complex subunit 11164473316944779324Rat
7580994LOC102551690uncharacterized LOC102551690164480445644810885Rat
41108070LOC120097672small nucleolar RNA SNORA70164481066844810803Rat
708477Stox2storkhead box 2164484817945087238Rat
41167470LOC120097575uncharacterized LOC120097575164487462344880702Rat
9368194LOC103693959uncharacterized LOC103693959164512509845180386Rat
1311645Enpp6ectonucleotide pyrophosphatase/phosphodiesterase 6164516588345294126Rat
1597769Ptmal4prothymosin alpha like 4164529538245307996Rat
7633194LOC102551895uncharacterized LOC102551895164533044745337282Rat
40949490LOC120097410uncharacterized LOC120097410164533760745339067Rat
1597747Ndufa3-ps1NADH:ubiquinone oxidoreductase subunit A3, pseudogene 1164536942845369682Rat
1304922Irf2interferon regulatory factor 2164543921545550054Rat
7619887LOC102552290uncharacterized LOC102552290164544824545462686Rat
40947202Ube2v1-ps3ubiquitin conjugating enzyme E2 V1, pseudogene 3164551413945514882Rat
40975017LOC120097385uncharacterized LOC120097385164555781545634329Rat
1592034Rpl4-ps3ribosomal protein L4, pseudogene 3164565621045657689Rat
2275Casp3caspase 3164566291045681171Rat
1562119Primpolprimase and DNA directed polymerase164568125245715758Rat
1562566Cenpucentromere protein U164571582145739038Rat
2015Acsl1acyl-CoA synthetase long-chain family member 1164575524645821541Rat
11492380LOC108348397uncharacterized LOC108348397164582156945837350Rat
41085564LOC120097625small nucleolar RNA SNORA26164588255245882683Rat
40948478LOC120097416uncharacterized LOC120097416164588353645886632Rat
41398591LOC120097417uncharacterized LOC120097417164588546545891183Rat
7538198LOC102553008uncharacterized LOC102553008164590194245914770Rat
11366572LOC108353101glyceraldehyde-3-phosphate dehydrogenase pseudogene164593892345943631Rat
41292406LOC120097420uncharacterized LOC120097420164596851945974350Rat
1564073Helthelt bHLH transcription factor164599122745993045Rat
41047665Trnat-agu36transfer RNA threonine (anticodon AGU) 36164600166546001745Rat
620352Slc25a4solute carrier family 25 member 4164607293546076730Rat
1307325Cfap97cilia and flagella associated protein 97164608610446135194Rat
1310150Snx25sorting nexin 25164613455246238471Rat
40946287LOC120097653U6 spliceosomal RNA164616119046161295Rat
1305896Lrp2bpLrp2 binding protein164624155446269221Rat
1565715Ankrd37ankyrin repeat domain 37164626893346271971Rat
1311161Ufsp2UFM1-specific peptidase 2164627201646291080Rat
1564308Cfap96cilia and flagella associated protein 96164629107546315616Rat
1564538Ccdc110coiled-coil domain containing 110164631574546337050Rat
620427Pdlim3PDZ and LIM domain 3164635246046383680Rat
41168026LOC120097631U6atac minor spliceosomal RNA164640181646401933Rat
1583491Gapdh-ps100Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 100164641375346414771Rat
41260400LOC120097373uncharacterized LOC120097373164642924046438631Rat
620061Sorbs2sorbin and SH3 domain containing 2164643522046748743Rat
41125224LOC120097374uncharacterized LOC120097374164660853746610271Rat
41305805LOC120097598small nucleolar RNA SNORA17164667983146679962Rat
41180056LOC120097435uncharacterized LOC120097435164680461246813785Rat
735171Tlr3toll-like receptor 3164682198046837900Rat
1586153Fam149afamily with sequence similarity 149, member A164685537746914553Rat
708530Cyp4v3cytochrome P450, family 4, subfamily v, polypeptide 3164691792946958735Rat
1589656Tuba1b-ps9tubulin, alpha 1B, pseudogene 9164695173246954254Rat
67382Klkb1kallikrein B1164695863446982054Rat
1309364F11coagulation factor XI164698798847009015Rat
620797Mtnr1amelatonin receptor 1A164714446147163919Rat
621254Fat1FAT atypical cadherin 1164717725347296261Rat
1588596Aldoa-ps1aldolase, fructose-bisphosphate A, pseudogene 1164749076147492204Rat
11411172LOC108348398uncharacterized LOC108348398164763321647650775Rat
1563604Ptrh2-ps1peptidyl-tRNA hydrolase 2, pseudogene 1164787217247872720Rat
7530546LOC102554462uncharacterized LOC102554462164795427547989673Rat
41329707LOC120097644U6 spliceosomal RNA164804191948042025Rat
1589009Edf1-ps4endothelial differentiation-related factor 1, pseudogene 4164848871248489307Rat
1307052Adam34la disintegrin and metalloprotease domain 34-like164853645648542246Rat
1589040Adam34a disintegrin and metallopeptidase domain 34164855738548561744Rat
1589057Calcoco2-ps1calcium binding and coiled-coil domain 2, pseudogene 1164859537948600523Rat
1559501Adam26aa disintegrin and metallopeptidase domain 26A164860099848608314Rat
1559626Atp5hl1ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d-like 1164862834948628948Rat
41257946Ncor1-ps1nuclear receptor co-repressor 1, pseudogene 1164867287348673861Rat
41113289Hmgb1-ps28high-mobility group box 1, pseudogene 28164874559648746342Rat
2319133Zfp42zinc finger protein 42164883646348845443Rat
11444868Rpl23-ps1ribosomal protein L23,pseudogene 1164888529148885721Rat
1587863Snrpc-ps1small nuclear ribonucleoprotein polypeptide C, pseudogene 1164891588248918885Rat
1565382Triml2tripartite motif family-like 2164894471248960949Rat
1593988Baz2a-ps1bromodomain adjacent to zinc finger domain, 2A, pseudogene 1164898277748989498Rat
1305337Triml1tripartite motif family-like 1164899496849005343Rat
41141043LOC120097661U6 spliceosomal RNA164948311249483211Rat
9999338Rps27a-ps15ribosomal protein S27a, pseudogene 15164959036749590926Rat
9999339Rps27a-ps16ribosomal protein S27a, pseudogene 16165003563450036049Rat
41225748LOC120097413uncharacterized LOC120097413165048751250503637Rat
9126708LOC10369396560S ribosomal protein L7 pseudogene165056549150566233Rat
1586634Gemin8-ps7gem (nuclear organelle) associated protein 8, pseudogene 7165058814950588849Rat
7540925LOC102547380uncharacterized LOC102547380165088885450901635Rat
41154096LOC120097486uncharacterized LOC120097486165091103650924771Rat
1585495Frg1FSHD region gene 1165092578350946661Rat
7561344LOC102547443uncharacterized LOC102547443165093531350966211Rat
621568Asah1N-acylsphingosine amidohydrolase 1165096640450997827Rat
620901Pcm1pericentriolar material 1165100831551105261Rat
620169Fgl1fibrinogen-like 1165112065251150907Rat
631381Mtus1microtubule associated scaffold protein 1165120249751347794Rat
9201979LOC103693968uncharacterized LOC103693968165124481851256450Rat
41362756LOC120097427uncharacterized LOC120097427165128400351290733Rat
41002418LOC120097428uncharacterized LOC120097428165129541951301207Rat
1308028Pdgfrlplatelet-derived growth factor receptor-like165134792951407850Rat
41365690Elob-ps1elongin B, pseduogene 1165137549251380114Rat
68387Slc7a2solute carrier family 7 member 2165141747851470784Rat
6495615Adam25a disintegrin and metallopeptidase domain 25165148876451492790Rat
1309066Adam24ADAM metallopeptidase domain 24165157827851584265Rat
1306608Mtmr7myotubularin related protein 7165164126751732212Rat
1560016Vps37aVPS37A subunit of ESCRT-I165173617051775384Rat
1305313Cnot7CCR4-NOT transcription complex, subunit 7165177541651794581Rat
628681Zdhhc2zinc finger DHHC-type palmitoyltransferase 2165180846551878060Rat
1563411Micu3mitochondrial calcium uptake family, member 3165191985952010705Rat
71068Fgf20fibroblast growth factor 20165203054952038201Rat
41067752LOC120097642U6 spliceosomal RNA165208750252087608Rat
1590854Rps3-ps5ribosomal protein S3, pseudogene 5165264188552642629Rat
1564316Msr1macrophage scavenger receptor 1165271777552803602Rat
6489169Gnb1-ps2G protein subunit beta 1, pseudogene 2165278833152790166Rat
41055381LOC120097637U4 spliceosomal RNA165298005752980188Rat
1588595Zfp148-ps1zinc finger protein 148, pseudogene 1165305519853057088Rat
41369722Rpl10a-ps10ribosomal protein L10A, pseudogene 10165313477053135584Rat
2322723Smad2-ps1SMAD family member 2, pseudogene 1165313646653137333Rat
1303318Tusc3tumor suppressor candidate 3165319619553345241Rat
41032360LOC120097620small nucleolar RNA SNORA17165335586353355986Rat
11480995Gapdh-ps27Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 27165339106453392063Rat
1307788Sgczsarcoglycan zeta165366028354740811Rat
11372709LOC108353112uncharacterized LOC108353112165374435553809921Rat
41029514LOC120097547uncharacterized LOC120097547165379065553822441Rat
41022210LOC120097546uncharacterized LOC120097546165383921353840224Rat
41355369LOC120097544uncharacterized LOC120097544165397301253982699Rat
2325533Mir383microRNA 383165404034054040413Rat
2322528Ddx18-ps1DEAD-box helicase 18, pseudogene 1165422270054227080Rat
1590853Eif2s1-ps3eukaryotic translation initiation factor 2 subunit alpha, pseudogene 3165440093254401861Rat
40943334LOC120097630U2 spliceosomal RNA165460551654605717Rat
1585256Vdac1-ps4voltage-dependent anion channel 1, pseudogene 4165511540855116384Rat
1585243C16h8orf48similar to human chromosome 8 open reading frame 48165524474455246642Rat
68416Dlc1DLC1 Rho GTPase activating protein165524671655671441Rat
11373421LOC108348402uncharacterized LOC108348402165549336255508311Rat
41224531LOC120097448uncharacterized LOC120097448165569594055709767Rat
1304810Trmt9btRNA methyltransferase 9B (putative)165574055155792198Rat
7630189Ube2e3-ps2ubiquitin-conjugating enzyme E2E 3, pseudogene 2165579978155800464Rat
2321133Sri-ps1sorcin, pseudogene 1165590642855907035Rat
1565245Hist1h2bc-ps1histone cluster 1, H2bc, pseudogene 1165594090755950046Rat
1562583Lonrf1LON peptidase N-terminal domain and ring finger 1165598457256015156Rat
41335540LOC120097451uncharacterized LOC120097451165608045856083734Rat
1311793Prag1PEAK1 related kinase activating pseudokinase 1165608788556141153Rat
7589768LOC102552468uncharacterized LOC102552468165634883456370705Rat
41253835LOC120097468uncharacterized LOC120097468165637070956374687Rat
41064674LOC120097487uncharacterized LOC120097487165639585856401150Rat
1309001Cldn23claudin 23165641367756415401Rat
6499975Lrpl1LDL receptor related protein like 1165642214556471368Rat
6500448Tufm-ps1Tu translation elongation factor, mitochondrial, pseudogene 1165643746656439103Rat
41266011LOC120097469uncharacterized LOC120097469165650165556508261Rat
1308812Mfhas1multifunctional ROCO family signaling regulator 1165654546256633649Rat
41219742LOC120097472uncharacterized LOC120097472165666140856710374Rat
1308378Eri1exoribonuclease 1165672410156744228Rat
7553804LOC102553369uncharacterized LOC102553369165677155156787029Rat
41097846LOC120097474uncharacterized LOC120097474165681295956816099Rat
621600Ppp1r3bprotein phosphatase 1, regulatory subunit 3B165683001156842395Rat
40973434Rpl21-ps23ribosomal protein L21, pseudogene 23165691489556918873Rat
7584717LOC102553697uncharacterized LOC102553697165706374857091262Rat
9216280LOC103693975uncharacterized LOC103693975165710271057115093Rat
1308784Tnkstankyrase165722317457370740Rat
620625Dusp4dual specificity phosphatase 4165737665957398161Rat
41342762LOC120097666U7 small nuclear RNA165740486757404926Rat
41246384LOC120097484uncharacterized LOC120097484165741833657422404Rat
9159214LOC10369397860S ribosomal protein L9-like165742942857430476Rat
6490582Rabif-ps1RAB interacting factor, pseudogene 1165798334257983697Rat
40987971LOC120097587small nucleolar RNA SNORA2/SNORA34 family165800164758001782Rat
1303011Sarafstore-operated calcium entry-associated regulatory factor165801723158035481Rat
1307168Leprotl1leptin receptor overlapping transcript-like 1165804093458053602Rat
1566335Mboat4membrane bound O-acyltransferase domain containing 4165806417858077523Rat
1307549Dctn6dynactin subunit 6165807759558096604Rat
1590852Rps17-ps6ribosomal protein S17, pseudogene 6165813384558134324Rat
40926223LOC120097589small nucleolar RNA SNORA29165815097558151119Rat
41011644LOC120097492uncharacterized LOC120097492165815983258164364Rat
41097190LOC120097647U6 spliceosomal RNA165817347258173578Rat
41008204LOC120097660U6 spliceosomal RNA165820278258202883Rat
1561067RbpmsRNA binding protein, mRNA processing factor165823937058395424Rat
41001752LOC120097493uncharacterized LOC120097493165838435558393888Rat
1310134Gtf2e2general transcription factor IIE subunit 2165839930758449467Rat
6501537Smim18small integral membrane protein 18165843170958439372Rat
41290435LOC120097494uncharacterized LOC120097494165847590258488564Rat
621747Gsrglutathione-disulfide reductase165848220958525256Rat
1306023Ubxn8UBX domain protein 8165853608658557684Rat
3381Ppp2cbprotein phosphatase 2 catalytic subunit beta165855811958579325Rat
1560512Rps25-ps6ribosomal protein S25, pseudogene 6165859778758598207Rat
1311266Tex15testis expressed 15, meiosis and synapsis associated165859899158659005Rat
1305088Purgpurine-rich element binding protein G165873232758763356Rat
1564788WrnWRN RecQ like helicase165876351758898604Rat
41245709LOC120097496uncharacterized LOC120097496165876431558781404Rat
1563097Rps15al5ribosomal protein S15A-like 5165890777058908201Rat
1596879Atpaf2-ps1ATP synthase mitochondrial F1 complex assembly factor 2, pseudogene 1165912763159128475Rat
41355498LOC120097371uncharacterized LOC120097371165924263459251923Rat
621341Nrg1neuregulin 1165925065860304519Rat
41207158LOC120097372uncharacterized LOC120097372165953674259548468Rat
7578262LOC102555473uncharacterized LOC102555473166032322860348169Rat
41119948LOC120097607U2 spliceosomal RNA166048425560484448Rat
1590851Hsp90ab1-ps4heat shock protein 90 alpha family class B member 1, pseudogene 4166075064860763034Rat
1359164Fut10fucosyltransferase 10166086876160958762Rat
1311297Mak16MAK16 homolog166097269960981250Rat
1310414Tti2TELO2 interacting protein 2166098066560988587Rat
41010522Snord13small nucleolar RNA, C/D box 13166098890960989013Rat
1561238Rnf122ring finger protein 122166100987961027429Rat
1310090Dusp26dual specificity phosphatase 26166104178461049319Rat
41360729LOC120097498uncharacterized LOC120097498166112209861137078Rat
7543674LOC102556287uncharacterized LOC102556287166129291761367615Rat
11415534LOC108348408uncharacterized LOC108348408166200731762021618Rat
41377703LOC120097501uncharacterized LOC120097501166212140562134088Rat
41122791LOC120097502uncharacterized LOC120097502166233163462375374Rat
1592970Rps20-ps8ribosomal protein S20, pseudogene 8166254039662540802Rat
1309245Unc5dunc-5 netrin receptor D166286011963406932Rat
41011289Trnal-aag8transfer RNA leucine (anticodon AAG) 8166292303062923110Rat
40993334LOC120097619U2 spliceosomal RNA166310940863109581Rat
41237509Trnas-aga51transfer RNA serine (anticodon AGA) 51166341721763417297Rat
2322262Nme1-ps2NME/NM23 nucleoside diphosphate kinase 1, pseudogene 2166346481463465284Rat
1590850Rps7-ps14ribosomal protein S7, pseudogene 14166389205763892632Rat
1589654Pcbp2-ps11poly(rC) binding protein 2, pseudogene 11166417346464175276Rat
41172685LOC120093063sperm motility kinase-like166425871764385668Rat
41338602LOC120097503uncharacterized LOC120097503166430384164315218Rat
6494469LOC100911229sperm motility kinase-like166441253364424489Rat
1562638Smoksperm motility kinase166445734464469296Rat
11432444LOC108353106uncharacterized LOC108353106166446944364474565Rat
6493806LOC100911264uncharacterized LOC100911264166448862564530093Rat
1359470PotegPOTE ankyrin domain family, member G166448863264670418Rat
69281Chrna6cholinergic receptor nicotinic alpha 6 subunit166469774164704441Rat
621544Chrnb3cholinergic receptor nicotinic beta 3 subunit166471343864751360Rat
1562020Rpl13a-ps8ribosomal protein L13A, pseudogene 8166476454664765239Rat
6493344Tex24ltestis expressed gene 24 like166477288064775087Rat
620259Eif4ebp1eukaryotic translation initiation factor 4E binding protein 1166479259564805984Rat
2061Adrb3adrenoceptor beta 3166483982064844552Rat
1307172Got1l1glutamic-oxaloacetic transaminase 1-like 1166486030864873656Rat
1562965Rab11fip1RAB11 family interacting protein 1166488690264917491Rat
1308817Brf2BRF2 general transcription factor 3B subunit166492833464933057Rat
2323365Adgra2adhesion G protein-coupled receptor A2166493296464971433Rat
41183719LOC120097504uncharacterized LOC120097504166499955265002608Rat
1308962Plpbppyridoxal phosphate binding protein166500329265014886Rat
1309010Erlin2ER lipid raft associated 2166501765465034184Rat
1588249Zfp703zinc finger protein 703166507650765080677Rat
11510605LOC108348410uncharacterized LOC108348410166510199465133088Rat
11416552Rpl21l3ribosomal protein L21 like 3166511827865118796Rat
11407470LOC108348411uncharacterized LOC108348411166515616165167893Rat
11474030LOC108348412uncharacterized LOC108348412166520128365225445Rat
41086999LOC120097505uncharacterized LOC120097505166523346465329563Rat
11428828LOC108348413uncharacterized LOC108348413166528696665302218Rat
41085096LOC120097638U4 spliceosomal RNA166550314365503295Rat
7631653LOC102548721uncharacterized LOC102548721166574062765745651Rat
41184862LOC120097512uncharacterized LOC120097512166586097665872807Rat
2323691Rps28-ps3ribosomal protein S28, pseudogene 3166588838965888708Rat
1307589Thap1THAP domain containing 1166590534865909942Rat
1590842Rnf170ring finger protein 170166592888665954092Rat
1560960Hook3hook microtubule-tethering protein 3166595429366058812Rat
2625Fntafarnesyltransferase, CAAX box, subunit alpha166606513166083460Rat
1310810Pomkprotein-O-mannose kinase166608556966101360Rat
1560755Hgsnatheparan-alpha-glucosaminide N-acetyltransferase166610523366137444Rat
7563810Timm23-ps5translocase of inner mitochondrial membrane 23, pseudogene 5166613000366132358Rat
1585877Kcnu1potassium calcium-activated channel subfamily U member 1166614169666229493Rat
1305632Ash2lASH2 like histone lysine methyltransferase complex subunit166624220566264064Rat
41019151LOC120097390uncharacterized LOC120097390166624868766260813Rat
3770Starsteroidogenic acute regulatory protein166626709466274368Rat
1304967Lsm1LSM1 homolog, mRNA degradation associated166627734566288852Rat
1560875Bag4BAG cochaperone 4166628867866305893Rat
40975762LOC120097398translation initiation factor IF-2-like166630218666320513Rat
1585818Ddhd2DDHD domain containing 2166631946966349025Rat
41392674LOC120097664U6 spliceosomal RNA166632724866327355Rat
1591734Plpp5phospholipid phosphatase 5166634948366353887Rat
1308980Nsd3nuclear receptor binding SET domain protein 3166635403066466202Rat
40986082LOC120097673small nucleolar RNA SNORA70166643716066437288Rat
1311220Letm2leucine zipper and EF-hand containing transmembrane protein 2166646495866489640Rat
620713Fgfr1Fibroblast growth factor receptor 1166649193066547161Rat
41035044LOC120097583small nucleolar RNA SNORA15166650282466502950Rat
41069881LOC120097430uncharacterized LOC120097430166655817666561902Rat
41207977LOC120097442uncharacterized LOC120097442166661466766616009Rat
2322704H2az1-ps1H2A.Z variant histone 1, pseudogene 1166665427266655163Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10841D16Wox13118164697584246975959Ratregion
10842D16Mgh5148164697580146975965Ratregion
34007D16Mit3144164423590444236047Ratregion
34066D16Mgh1236164302484243025077Ratregion
34142D16Mgh9247162489156524891815Ratregion
34553D16Mgh6100164586839745868497Ratregion
33636D16Mit1164162416342224163586Ratregion
37550D16Rat26202162198271521982923Ratregion
35200D16Rat102135163125096931251104Ratregion
35280D16Rat19233163195152031951755Ratregion
35419D16Rat18160162855437028554528Ratregion
37054D16Rat17161165016582850166018Ratregion
37766D16Rat46213163756166437561877Ratregion
37820D16Rat28237165651345656513678Ratregion
34894D16Rat29139164605335446053497Ratregion
35022D16Rat101160166441948064419656Ratregion
35022D16Rat101160166446426264464425Ratregion
35024D16Rat1173163722727437227441Ratregion
35026D16Rat3169164197656441976726Ratregion
35763D16Rat5126162218033522180465Ratregion
35861D16Rat4167163260283132602998Ratregion
39604D16Rat99148162949466329494815Ratregion
39642D16Rat63200165875570558755903Ratregion
39714D16Rat74155162238106322381216Ratregion
39776D16Rat72188163956806339568262Ratregion
39838D16Rat109202166014824360148445Ratregion
39920D16Rat70200163326116533261371Ratregion
39936D16Rat96201164700891247009115Ratregion
40416D16Rat10498163783974637839826Ratregion
40450D16Rat103172163716730337167473Ratregion
40524D16Rat67254164682540246825624Ratregion
40742D16Rat71200163994411839944324Ratregion
38428D16Rat53133166237240362372520Ratregion
38594D16Rat52213162462910324629302Ratregion
38712D16Rat50249164187770241877941Ratregion
40030D16Rat98144164729970747299837Ratregion
40052D16Rat75141162247748222477621Ratregion
40166D16Rat65171165805880458058953Ratregion
40234D16Rat60138166025208160252231Ratregion
40320D16Rat66132165778880357788938Ratregion
38888D16Rat45245164524214945242380Ratregion
38892D16Rat23206166515867565158881Ratregion
38938D16Rat40206165673363456733837Ratregion
38988D16Rat27202165769414657694345Ratregion
39390D16Rat64221165571108755711306Ratregion
42024D16Arb6188162502933025029518Ratregion
42026D16Arb7180162502520725025382Ratregion
42028D16Arb8115164586837445868494Ratregion
41248D16Rat58171166489625964896432Ratregion
41264D16Rat61151166036570560365856Ratregion
41344D16Rat59134166490477464904907Ratregion
41526D16Rat62173165534091555341087Ratregion
43070D16Rat118239163776560837765831Ratregion
43072D16Rat116215164897251248972724Ratregion
43073D16Rat114239165649778656498005Ratregion
43075D16Rat100215166505547065055680Ratregion
42410D16Rat129215164524119245241409Ratregion
40820D1Rat310224165752881057529045Ratregion
40906D16Rat73125162208806822088199Ratregion
41034D16Rat95209165353399053534189Ratregion
41682D16Rat108200166667609966676291Ratregion
41766D16Rat110104165203390252034012Ratregion
44552D9Wox21136162266135222661409Ratregion
43774D4Got13149163055251130552548Ratregion
60524D6Got198149163766737937667530Ratregion
60767D16Wox12131162644861526448740Ratregion
60770D16Wox674165866050758660581Ratregion
60125D16Got44225164672004846720273Ratregion
60128D16Got63195166557058865570785Ratregion
60129D16Got69154166587067965870833Ratregion
45333D16Got26176162368820023688376Ratregion
45335D16Got96169162594760525947774Ratregion
45339D16Got29106162922768729227793Ratregion
45339D16Got29106162922768729228698Ratregion
45340D16Got31240162791029127910525Ratregion
45342D16Got36142164329606043296202Ratregion
45343D16Got34255164228576042286015Ratregion
45344D16Got3299164199145641991552Ratregion
45347D16Got38247164526597945266226Ratregion
45348D16Got40220164728839447288612Ratregion
45351D16Got43119164788228147882400Ratregion
45352D16Got45136164765416847654304Ratregion
45353D16Got39279164774362547743901Ratregion
45354D16Got41194164859680148596997Ratregion
45356D16Got47121164814731948147441Ratregion
45357D16Wox4100164814398248144134Ratregion
45358D16Got46154164937164149371795Ratregion
45359D16Got55195165177709951777294Ratregion
45361D16Got50219165286503052865249Ratregion
45363D16Got54151165665032856650479Ratregion
45364D16Got52198165510588255106080Ratregion
45365D16Got97226165741324957413475Ratregion
45366D16Got53193165599659055996783Ratregion
45367D16Got59275165742218157422456Ratregion
45368D16Got58141165995813659958277Ratregion
45369D16Wox7109165949240159492508Ratregion
45372D16Got61201166447836064478561Ratregion
45375D16Got65219166572060265720765Ratregion
45375D16Got65219166572060265720821Ratregion
67810D16Uwm1188163498603834986252Ratregion
625822D16Got60131166517619265176323Ratregion
59997D11Got6162163395101733951179Ratregion
62443D16Uia1146165370857853708726Ratregion
62448D16Uia2229163750299137503219Ratregion
62459D16Uia493164442996344430103Ratregion
62475D1Uia4140165811420458114246Ratregion
66392D16Mco7163164765272447652862Ratregion
66539D16Uia5228162441724424417476Ratregion
66647D16Mco10360162857279928573169Ratregion
1578828D18Chm16170164838145748381490Ratregion
1630081D16Got105264164423337944233637Ratregion
1630384D16Got122194163340779333407987Ratregion
1630617D16Got117172164556777745567955Ratregion
1631219D16Got107125165605233856052465Ratregion
1627781D16Got118261165607412856074389Ratregion
1628175D16Got103169162544383825444007Ratregion
1628406D16Got115137163349067433490811Ratregion
1629940D16Wox22131166650299166503122Ratregion
1639035D16Got127182166311143363111615Ratregion
1639196D16Got126162163395101933951181Ratregion
1639212D16Got106198165554473155544924Ratregion
1639279D16Wox23201166650268066502881Ratregion
1633053D16Got108186163077944430779630Ratregion
1633610D16Got110286163872256138722847Ratregion
1639909D16Got125251166374950763749758Ratregion
1636902D16Got121223165470750254707725Ratregion
1638178D16Got104211163514484735145059Ratregion
1638194D16Wox15165166027662460276789Ratregion
2315208D16Nkg45295165557908055579375Ratregion
2315210D16Nkg53237165562053555621067Ratregion
2315210D16Nkg53237165562083055621067Ratregion
2315212D16Nkg52355165561879655619151Ratregion
2315214D16Nkg85173165873975058739923Ratregion
2315216D16Nkg82249165786617457866423Ratregion
2315218D16Nkg5221164355379243554013Ratregion
2315220D16Nkg91161165925365059253811Ratregion
2315224D16Nkg15248164382977843830026Ratregion
2315226D16Nkg71170165641099656411166Ratregion
2315228D16Nkg41192165513438655134578Ratregion
2315230D16Nkg4283164351564843515931Ratregion
2315232D16Nkg37191165251451652514707Ratregion
2315234D16Nkg94276166143352261433796Ratregion
2315236D16Nkg75316165761490257615219Ratregion
2315238D16Nkg46225165548170255481927Ratregion
2315240D16Nkg61298165601410256014400Ratregion
2315242D16Nkg38193165436699454367189Ratregion
2315244D16Nkg11304164368652143686825Ratregion
2315246D16Nkg25162164498350144983663Ratregion
2315248D16Nkg13294164382440043824694Ratregion
2315250D16Nkg107198166348448363484683Ratregion
2315252D16Nkg42268165542762755427895Ratregion
2315254D16Nkg44274165552736155527635Ratregion
2315256D16Nkg90176165920149659201672Ratregion
2315258D16Nkg93220166139436661394586Ratregion
2315262D16Nkg80286165770314957703435Ratregion
2315264D16Nkg97230166149497561495207Ratregion
2315266D16Nkg73277165757984457580123Ratregion
2315268D16Nkg43363165552021455520577Ratregion
2315270D16Nkg66337165618754556187882Ratregion
2315272D16Nkg47213165550086955501082Ratregion
2315274D16Nkg26219164527420145274422Ratregion
2315276D16Nkg55136165563952655639662Ratregion
2315278D16Nkg110244166403689064037134Ratregion
2315280D16Nkg84244165846704158467287Ratregion
2315282D16Nkg59217165580796155808178Ratregion
2315284D16Nkg21206164416532144165529Ratregion
2315286D16Nkg106184166347767963477861Ratregion
2315288D16Nkg54193165563601455636207Ratregion
2315290D16Nkg24190164483512444835314Ratregion
2315292D16Nkg102305166308794163088246Ratregion
2315294D16Nkg29266164533456945334835Ratregion
2315296D16Nkg111243166454910664549351Ratregion
2315298D16Nkg92237166103204361032280Ratregion
2315302D16Nkg28197164532269845322895Ratregion
2315304D16Nkg99229166152543161525660Ratregion
2315306D16Nkg33217164539831845398717Ratregion
2315306D16Nkg33217164539850045398717Ratregion
2315308D16Nkg58160165574627955746439Ratregion
2315310D16Nkg36269165154301851543289Ratregion
2315312D16Nkg72218165641824956418467Ratregion
2315314D16Nkg27266164532184045322106Ratregion
2315316D16Nkg10279164361822943618508Ratregion
2315318D16Nkg9215164359990643600121Ratregion
2315320D16Nkg88300165896859558968897Ratregion
2315322D16Nkg98335166150498261505317Ratregion
2315324D16Nkg56314165564798055648294Ratregion
2315326D16Nkg32237164538032545380564Ratregion
2315328D16Nkg103182166342979163429973Ratregion
2315330D16Nkg31177164534255245342731Ratregion
2315332D16Nkg68167165621202856212195Ratregion
2315334D16Nkg96341166146834861468689Ratregion
2315336D16Nkg1171164331048043310653Ratregion
2315338D16Nkg8207164359445643594666Ratregion
2315342D16Nkg16118164394708143947199Ratregion
2315344D16Nkg48339165552249255522831Ratregion
2315346D16Nkg76254165762169357621945Ratregion
2315350D16Nkg57210165567355755673767Ratregion
2315352D16Nkg30209164533562345335827Ratregion
2315354D16Nkg62193165602729856027491Ratregion
2315356D16Nkg89169165912281859122987Ratregion
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5506151UniSTS:49847281163398832933988410Ratregion
5506368Cdkn2aip543164453905144539594Ratregion
5506356UniSTS:478956120163291932432919444Ratregion
5506493D17S15841538162960771629609254Ratregion
5507043UniSTS:224176159162997019029970349Ratregion
5506925G54093143163686417036864313Ratregion
5499969UniSTS:235869186165855840458558590Ratregion
5500440fc63g12.x1131165712364157123772Ratregion
5499967UniSTS:235863259166104180661042065Ratregion
5499971UniSTS:235866330165873243858732768Ratregion
5500322GDB:1874241430162829191328293343Ratregion
5500749D7S1476766166323951763240283Ratregion
5500358GDB:315025270164973914549739415Ratregion
5500404GDB:451604152166665457466654726Ratregion
5501207PMC154461P1566166649985866500425Ratregion
5501141PMC148819P9192164566450945664701Ratregion
5501293RH16017359164730898347309342Ratregion
5505392Hook3927166604957566050502Ratregion
5502092MARC_31601-31602:1045759847:1371166665458466654955Ratregion
5501968MARC_21337-21338:1023126946:11093165566776655668859Ratregion
Position Markers

Peak: (D16Mit3)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21644,235,904 - 44,236,047 (+)MAPPER
Rnor_6.01647,346,470 - 47,346,612NCBI
Rnor_5.01647,069,602 - 47,069,744UniSTS
RGSC_v3.41647,434,241 - 47,434,384RGD
RGSC_v3.41647,434,242 - 47,434,384UniSTS
RGSC_v3.11647,434,317 - 47,434,459RGD
Celera1642,249,982 - 42,250,124UniSTS
RH 3.4 Map16402.0UniSTS
RH 3.4 Map16402.0RGD
RH 2.0 Map16432.9RGD
SHRSP x BN Map1612.35RGD
Cytogenetic Map16 RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631561Hcuc2Hepatic copper content QTL 22.8liver copper amount (VT:0003065)liver total copper weight (CMO:0001507)16139533949Rat
1582235Insul8Insulin level QTL 83.30.0063blood insulin amount (VT:0001560)calculated serum insulin level (CMO:0000359)16126727669Rat
70215Niddm29Non-insulin dependent diabetes mellitus QTL 293.54blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)161900443575226532Rat
2307172Activ4Activity QTL 43.710.00023locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)16133418960Rat
1578768Stresp22Stress response QTL 222.8thymus mass (VT:0004954)thymus wet weight (CMO:0000855)163528887080288870Rat
2302057Pia29Pristane induced arthritis QTL 293.60.001blood autoantibody amount (VT:0003725)serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)162173597566735975Rat
1354584Despr6Despair related QTL 63.10.0067locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16139533930Rat
2302380Slep6Serum leptin concentration QTL 63.36blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)16132139025Rat
737819Hcas4Hepatocarcinoma susceptibility QTL 44.43liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)16422760946975965Rat
631833Sach2Saccharin preference QTL 240.01consumption behavior trait (VT:0002069)calculated saccharin drink intake rate (CMO:0001613)164302484250166018Rat
1354625Despr7Despair related QTL 73.160.016locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16144977551Rat
9590151Scort8Serum corticosterone level QTL 88.450.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)16130836262Rat
6903294Stl30Serum triglyceride level QTL 302.60.0013blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)162515279370152793Rat
2293690Bss45Bone structure and strength QTL 455.130.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)163775215682752156Rat
8694364Abfw7Abdominal fat weight QTL 712.220.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)165272646484729064Rat
8694429Bw164Body weight QTL 16450.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)165272646484729064Rat
61338Bp23Blood pressure QTL 234.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16422760949227609Rat
61405Niddm6Non-insulin dependent diabetes mellitus QTL 63.660.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)16422760948972724Rat
631830Alc7Alcohol consumption QTL 72.9consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16126727669Rat
2300163Bmd64Bone mineral density QTL 645.30.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)163775215682752156Rat
7411664Foco30Food consumption QTL 30110.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)16144588133Rat
1600378Arunc4Aerobic running capacity QTL 40.03exercise endurance trait (VT:0002332)maximum distance run on treadmill (CMO:0001406)1638024580345693Rat
70183BpQTLcluster13Blood pressure QTL cluster 133.654arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)16422760943025077Rat
737826Alc11Alcohol consumption QTL 113.2consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16422760960252231Rat
1600369Hcas8Hepatocarcinoma susceptibility QTL 8liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)16122477621Rat
7205510Activ5Activity QTL 53.780.00028locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)164239634584729064Rat
631525Pia14Pristane induced arthritis QTL 144.4joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)165571108783402471Rat
2303566Bw90Body weight QTL 902body mass (VT:0001259)body weight (CMO:0000012)16139533930Rat
7411648Foco22Food consumption QTL 22150.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)165272646484729064Rat
8694453Bw172Body weight QTL 1728.330.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)162432551369325513Rat
1298529Arunc1Aerobic running capacity QTL 14exercise endurance trait (VT:0002332)maximum distance run on treadmill (CMO:0001406)163195152060148445Rat
2312663Slep9Serum leptin concentration QTL 90.001blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)1683223659492508Rat
2306902Bp339Blood pressure QTL 3390.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16338015043025077Rat
2312660Bw95Body weight QTL 950.05inguinal fat pad mass (VT:0010424)inguinal fat pad weight to body weight ratio (CMO:0001253)1683223659492508Rat
2312666Insul16Insulin level QTL 160.01blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1683223659492508Rat
634355Rends4Renal damage susceptibility QTL 40.05kidney blood vessel morphology trait (VT:0000530)organ lesion measurement (CMO:0000677)16126727669Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor diameter (CMO:0001889)161769679182635055Rat
2293343Glom16Glomerulus QTL 167.4kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)1683223646053497Rat
2312669Stl23Serum triglyceride level QTL 230.01blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)1683223659492508Rat
6903319Bw114Body weight QTL 1142.70.0037body mass (VT:0001259)body weight (CMO:0000012)16143534949Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general no association with disease or immunoglobin levels noticed 2302026
qtl_general inducing agent and dosage: pristane 150 microliter 2302026
qtl_general measurement method: serum samples were collected on days 6, 14, 35, 49, 100, and desired levels were quantified by ELISA 2302026
qtl_general software used: Map Manager QTX software and R/qtl in R-Plus package 2302026
qtl_general this region has no association to rheumatoid arthritis 2302026