Niddm38 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Niddm38 (Non-insulin dependent diabetes mellitus QTL 38) Rattus norvegicus

Symbol: Niddm38
Name: Non-insulin dependent diabetes mellitus QTL 38
RGD ID: 631840
Trait: blood glucose amount   (VT:0000188)    
Measurement Type: blood glucose level   (CMO:0000046)    
LOD Score: 3.86
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21910,323,180 - 23,069,265RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01910,739,929 - 26,201,726RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01910,733,966 - 37,177,349RGDRnor5.0
RGSC_v3.41910,762,811 - 24,725,428RGDRGSC3.4
RGSC_v3.11910,767,637 - 24,730,254RGD
Cross Type: Not Available
Strains Crossed: OLETF F344/NRrrc 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Candidate Gene Status
Cpe is a candidate Gene for Niddm38
Npy5r is a candidate Gene for Niddm38
Npy2r is a candidate Gene for Niddm38

Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Vertebrate Trait

Rat Strain
F344/NRrrc  (IEA)
OLETF  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Ranking candidate genes in rat models of type 2 diabetes. Andersson L, etal., Theor Biol Med Model. 2009 Jul 3;6:12.
2. QTLs influencing carbohydrate and fat choice in a LOU/CxFischer 344 F2 rat population. Marissal-Arvy N, etal., Obesity (Silver Spring). 2013 Apr 17. doi: 10.1002/oby.20485.
3. Identification of possible quantitative trait loci responsible for hyperglycaemia after 70% pancreatectomy using a spontaneously diabetogenic rat. Ogino T, etal., Genet Res 1999 Feb;73(1):29-36.
Related QTLs

Related QTL Description Reference
Bw130 maps to same region RGD:7401255


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
621478Pllpplasmolipin191031510410335892Rat
1561471Arl2bpADP-ribosylation factor like GTPase 2 binding protein191033692110346555Rat
1308847Rspry1ring finger and SPRY domain containing 1191035244910403015Rat
1307433Psme3ip1proteasome activator subunit 3 interacting protein 1191040140010430059Rat
41135224LOC120098678small nucleolar RNA SNORA5191040654810406684Rat
1586036Cpne2copine 2191043427710472146Rat
1309166Nlrc5NLR family, CARD domain containing 5191047763810581023Rat
11410734LOC10834889160S ribosomal protein L36 pseudogene191054142010541840Rat
620818Herpud1homocysteine inducible ER protein with ubiquitin like domain 1191059841110609002Rat
7553468LOC102553339uncharacterized LOC102553339191060920410621955Rat
3686Slc12a3solute carrier family 12 member 3191063065110679250Rat
40972653LOC120098571uncharacterized LOC120098571191063197710658610Rat
2325569Mir138-2microRNA 138-2191067419310674274Rat
1311525Nup93nucleoporin 93191068421410788009Rat
3117Mt1metallothionein 1191082603210827048Rat
1592345Mt2Ametallothionein 2A191083200910832783Rat
621252Mt3metallothionein 3191084875410850158Rat
1565500Mt4metallothionein 4191086381310865909Rat
11362058LOC108348893uncharacterized LOC108348893191090773910909865Rat
71091Bbs2Bardet-Biedl syndrome 2191090965310944998Rat
1308848Ogfod12-oxoglutarate and iron-dependent oxygenase domain containing 1191094503110974602Rat
1305766Nudt21nudix hydrolase 21191097480010993841Rat
1311551Amfrautocrine motility factor receptor191099670511032260Rat
628732Gnao1G protein subunit alpha o1191103487411192531Rat
41267554LOC120098573uncharacterized LOC120098573191127295111280480Rat
1549717Ces5acarboxylesterase 5A191146943111499007Rat
1308895Large1LARGE xylosyl- and glucuronyltransferase 1191160312912048930Rat
1586039Aagab-ps2alpha- and gamma-adaptin binding protein, pseudogene 2191207684212078376Rat
41299646LOC120098613uncharacterized LOC120098613191233997412350282Rat
1559772Luc7l1-ps1LUC7-like 1, pseudogene 1191239281712393601Rat
9444094Snrpd3l1small nuclear ribonucleoprotein D3 polypeptide like 1191239602612396454Rat
41273870Trnaa-agc68transfer RNA alanine (anticodon AGC) 68191293679912936873Rat
41294602LOC120098697small nucleolar RNA SNORA17191302640613026533Rat
1561919Rps18l2ribosomal protein S18 like 2191310714513107646Rat
1592776Isxintestine-specific homeobox191321763713239754Rat
2319922Rps2-ps41ribosomal protein S2, pseudogene 41191335810313359054Rat
1305783Hmgxb4HMG-box containing 4191336474113403563Rat
7540032LOC102556139uncharacterized LOC102556139191338856413405676Rat
1308024Tom1target of myb1 membrane trafficking protein191340548213440384Rat
2806Hmox1heme oxygenase 1191346628713474082Rat
1306616Mcm5minichromosome maintenance complex component 5191348303013504389Rat
628594Rasd2RASD family, member 2191359429113605016Rat
2319732Uqcc3-ps1ubiquinol-cytochrome c reductase complex assembly factor 3, pseudogene 1191366235413666993Rat
1564492Trappc2ll1trafficking protein particle complex subunit 2L like 1191368393913684509Rat
41247345LOC120098733small nucleolar RNA U3191370264613702853Rat
1642419Ces1fcarboxylesterase 1F191379662313822113Rat
621508Ces1ecarboxylesterase 1E191383315413869627Rat
70896Ces1dcarboxylesterase 1D191387349013912035Rat
2571Ces1ccarboxylesterase 1C191392640113955527Rat
1583671Ces1acarboxylesterase 1A191395952913986370Rat
621822Slc6a2solute carrier family 6 member 2191401029214055317Rat
2325051Lpcat2lysophosphatidylcholine acyltransferase 2191408838914152742Rat
1583620Capns2calpain, small subunit 2191410433414105276Rat
621316Mmp2matrix metallopeptidase 2191415465714182870Rat
40944742LOC120098590uncharacterized LOC120098590191418845714198236Rat
11410986LOC108348898uncharacterized LOC108348898191420786414223664Rat
41362713LOC120098597uncharacterized LOC120098597191423314514238604Rat
1564830Irx6iroquois homeobox 6191433044014336403Rat
41303095LOC120098515uncharacterized LOC120098515191457940014587212Rat
1565518Irx5iroquois homeobox 5191463905214643911Rat
10398753Crndecolorectal neoplasia differentially expressed191464388714653880Rat
11438506Trnas-aga11transfer RNA serine (anticodon AGA) 11191469978714699867Rat
40945959LOC120098593uncharacterized LOC120098593191488138814897369Rat
1307424Irx3iroquois homeobox 3191521188215215317Rat
1305121FtoFTO, alpha-ketoglutarate dependent dioxygenase191528489815692142Rat
7661148LOC102556484uncharacterized LOC102556484191530716315311101Rat
1311099Rpgrip1lRpgrip1-like191569218915785083Rat
1311170AktipAKT interacting protein191586681115877123Rat
3541Rbl2RB transcriptional corepressor like 2191587685215923632Rat
41323723LOC120098695small nucleolar RNA SNORA17191593431215934444Rat
1306795Chd9chromodomain helicase DNA binding protein 9191594153516146220Rat
11448883LOC108348876U1 small nuclear ribonucleoprotein C pseudogene191595711915960185Rat
1593026Mif-ps3macrophage migration inhibitory factor, pseudogene 3191626166116263204Rat
11362355LOC108348901uncharacterized LOC108348901191650019716516868Rat
1591794Ldha-ps22lactate dehydrogenase A, pseudogene 22191653834216539830Rat
41023938LOC120098523uncharacterized LOC120098523191659814016642551Rat
1311529Tox3TOX high mobility group box family member 3191664833816757151Rat
7542010LOC102549475uncharacterized LOC102549475191700136617025361Rat
7532016LOC102549581uncharacterized LOC102549581191722091617225036Rat
40937786LOC120098536uncharacterized LOC120098536191722538217232395Rat
41366286LOC120098701small nucleolar RNA SNORA17191735007517350206Rat
40952774LOC120098500uncharacterized LOC120098500191745648017457299Rat
41111973LOC120098514uncharacterized LOC120098514191755814117583832Rat
41396074LOC120098563uncharacterized LOC120098563191759007517607147Rat
7597669LOC102553444uncharacterized LOC102553444191786762617901672Rat
41064998Trnap-agg28transfer RNA proline (anticodon AGG) 28191792765617927730Rat
1309916Sall1spalt-like transcription factor 1191800578218022705Rat
7505565LOC102557216uncharacterized LOC102557216191827991618287521Rat
1308346CyldCYLD lysine 63 deubiquitinase191831063218373696Rat
6491014Npm1-ps2nucleophosmin 1, pseudogene 2191833904218339497Rat
41168625LOC120098599uncharacterized LOC120098599191837558018379594Rat
1306368Nod2nucleotide-binding oligomerization domain containing 2191838236918422817Rat
1307787Snx20sorting nexin 20191843593518445108Rat
1308491Nkd1NKD inhibitor of WNT signaling pathway 1191847634418549380Rat
41024705LOC120098503uncharacterized LOC120098503191869833118710027Rat
1309891Brd7bromodomain containing 7191870879218737497Rat
619966Adcy7adenylate cyclase 7191874087518798924Rat
1309587Tent4bterminal nucleotidyltransferase 4B191880761618868969Rat
1308267Heatr3HEAT repeat containing 3191889247718930502Rat
1308816Cnep1r1CTD nuclear envelope phosphatase 1 regulatory subunit 1191893263118947667Rat
11438483LOC108348906uncharacterized LOC108348906191893444518941602Rat
1587042Mrto4-ps7mRNA turnover 4, ribosome maturation factor, pseudogene 7191904060819041095Rat
41104662LOC120098652basic proline-rich protein-like191910796619110624Rat
621664Zfp423zinc finger protein 423191911121319407373Rat
40998408LOC120098541uncharacterized LOC120098541191941918819443773Rat
1585876C19h16orf78similar to human chromosome 16 open reading frame 78191948424819509632Rat
7646717LOC102551322uncharacterized LOC102551322191950545119550814Rat
1562813Cbln1cerebellin 1 precursor191960876319612572Rat
41306472LOC120098531uncharacterized LOC120098531191977859619788806Rat
1587310Ybx1-ps23Y box binding protein 1, pseudogene 23191984957919851101Rat
41252508Glul-ps2glutamate-ammonia ligase, pseudogene 2191986461719865783Rat
41373433LOC120098553uncharacterized LOC120098553191999827520000323Rat
1585808Rpl19-ps19ribosomal protein L19, pseudogene 19192003475320035336Rat
1585793Rps15a-ps3ribosomal protein S15a, pseudogene 3192005394420054336Rat
2321146Abhd10-ps1abhydrolase domain containing 10, depalmitoylase, pseudogene 1192005483620055779Rat
1587309Rpl36-ps5ribosomal protein L36, pseudogene192007053220070891Rat
41224445LOC120098692small nucleolar RNA SNORA17192013072520130852Rat
2321096Cct3-ps5chaperonin containing TCP1 subunit 3, pseudogene 5192014643420148027Rat
41320463LOC120098595uncharacterized LOC120098595192018968520195690Rat
1305179N4bp1Nedd4 binding protein 1192022281120273570Rat
620449Siah1siah E3 ubiquitin protein ligase 1192037890820402512Rat
1305466Lonp2lon peptidase 2, peroxisomal192040747520498985Rat
41215232LOC120098751U6 spliceosomal RNA192046621920466325Rat
735100Abcc12ATP binding cassette subfamily C member 12192054929820621991Rat
2324816Npm1-ps18nucleophosmin 1, pseudogene 18192078548520786466Rat
41268452LOC120098533uncharacterized LOC120098533192080090120808057Rat
41214423LOC120098690small nucleolar RNA SNORA17192088486820884995Rat
620186Phkbphosphorylase kinase regulatory subunit beta192101371921210671Rat
619898Itfg1integrin alpha FG-GAP repeat containing 1192121069721331285Rat
41323917LOC120098702small nucleolar RNA SNORA17192126084921260963Rat
1305310Neto2neuropilin and tolloid like 2192134429921415524Rat
71001Dnaja2DnaJ heat shock protein family (Hsp40) member A2192149779221516904Rat
1305462Gpt2glutamic--pyruvic transaminase 2192152680021561314Rat
41276456LOC120098665uncharacterized LOC120098665192158988221626464Rat
1308706C19h16orf87similar to human chromosome 16 open reading frame 87192162639021653869Rat
7642644Rps11-ps2ribosomal protein S11, pseudogene 2192167532621675840Rat
1305801Mylk3myosin light chain kinase 3192168508521743587Rat
1311437Orc6origin recognition complex, subunit 6192175786721765638Rat
1589784Vps35VPS35 retromer complex component192176577121801620Rat
41258260LOC120098671U6 spliceosomal RNA192178002821780125Rat
9272283LOC103694302mitogen-activated protein kinase 4 pseudogene192181819721820544Rat
1333226Or7c19olfactory receptor family 7 subfamily C member 19192183241321834841Rat
41292314Ppp1cb-ps5protein phosphatase 1 catalytic subunit beta, pseudogene 5192184416921935356Rat
1587786Speer4cl1spermatogenesis associated glutamate (E)-rich protein 4C like 1192190971921937396Rat
7680597Iqcml1IQ motif containing M like 1192194104622072466Rat
1592207Septin7-ps5septin 7, pseudogene 5192203073022033259Rat
41391415LOC120098737small nucleolar RNA U3192215375522153962Rat
6500925LOC100909916trafficking protein particle complex subunit 2-like protein-like192217032722170897Rat
11447015Dlg5l10discs large MAGUK scaffold protein 5 like 10192218490522189682Rat
1584830Dlg5l15discs large MAGUK scaffold protein 5 like 15192236565222370450Rat
41392794LOC120098507igE-binding protein-like192238051822381798Rat
1596406Speer4cl2spermatogenesis associated glutamate (E)-rich protein 4C like 2192239534322439432Rat
41257688Zc3hav1-ps8zinc finger CCCH-type containing, antiviral 1, pseudogene 8192239588322397692Rat
41070523Ppp1cb-ps3protein phosphatase 1 catalytic subunit beta, pseudogene 3192245184522454193Rat
2318841Zc3hav1-ps1zinc finger CCCH-type containing, antiviral 1, pseudogene 1192245731422458889Rat
7544409Dlg5l6discs large MAGUK scaffold protein 5 like 6192247128722475693Rat
1562660Dlg5l16discs large MAGUK scaffold protein 5 like 16192250949722513925Rat
1359640Ces1dl1carboxylesterase 1D like 1192256068522592355Rat
41346441LOC120098583uncharacterized LOC120098583192260705822626254Rat
1565666Cesl1carboxylesterase-like 1192267070923006329Rat
41168099Zc3hav1-ps6zinc finger CCCH-type containing, antiviral 1, pseudogene 6192276965122771419Rat
7509687Ppp1cb-ps4protein phosphatase 1 catalytic subunit beta, pseudogene 4192279295522795089Rat
41235451LOC120098582disks large homolog 5-like192279999622804911Rat
7546549Zc3hav1-ps3zinc finger CCCH-type containing, antiviral 1, pseudogene 3192280973622811770Rat
41097078Dlg5l12discs large MAGUK scaffold protein 5 like 12192281719222885981Rat
1596470Speer4cl7spermatogenesis associated glutamate (E)-rich protein 4C like 7192283534722839939Rat
1597757Speer4cl8spermatogenesis associated glutamate (E)-rich protein 4C like 8192285219922922593Rat
41078009LOC120098580DNA-directed RNA polymerase II subunit GRINL1A-like192287891022880774Rat
11469687LOC108353199serine/threonine-protein phosphatase PP1-beta catalytic subunit pseudogene192290367722904690Rat
11497700LOC108353202disks large homolog 5-like192293511022939810Rat
11468427LOC108348220zinc finger CCCH-type antiviral protein 1 pseudogene192295988422963318Rat
1593780Ppp1cb-ps6protein phosphatase 1 catalytic subunit beta, pseudogene 6192298007122984653Rat
41141743Zc3hav1-ps4zinc finger CCCH-type containing, antiviral 1, pseudogene 4192299450022996011Rat
41314813LOC120098586uncharacterized LOC120098586192299752823000324Rat
11384271LOC108353207uncharacterized LOC108353207192300217723004908Rat
2323544Zfp791zinc finger protein 791192301841823033580Rat
1306317Sec61g-ps1Sec61 translocon subunit gamma, pseudogene 1192303725023037626Rat
3039Man2b1mannosidase, alpha, class 2B, member 1192305509223074398Rat
7696942Rpl13-ps7ribosomal protein L13, pseudogene 7191199320111999084Rat
9351195LOC103694287uncharacterized LOC103694287191334029913342578Rat
9215808LOC103694288uncharacterized LOC103694288191344606713466195Rat
11371108Speer4cl6spermatogenesis associated glutamate (E)-rich protein 4C like 6191373787813771508Rat
41251642LOC120098544uncharacterized LOC120098544191418294614187957Rat
9415173LOC103694293FUN14 domain-containing protein 2 pseudogene191470626414706743Rat
7497501LOC102555119uncharacterized LOC102555119191501392515018390Rat
11478525LOC108348902uncharacterized LOC108348902191649266416500151Rat
41254820LOC120098502uncharacterized LOC120098502191729079017291512Rat
7678927LOC102553117uncharacterized LOC102553117191745682517471003Rat
9301627LOC103694298uncharacterized LOC103694298191770945517769586Rat
7738559LOC102553576uncharacterized LOC102553576191794803918008876Rat
7602258LOC102551515uncharacterized LOC102551515191978886119800730Rat
11375248LOC10834896660S ribosomal protein L29 pseudogene191985805419858524Rat
7637652LOC102547741uncharacterized LOC102547741192035841420365813Rat
7714102LOC102548349uncharacterized LOC102548349192154702121554142Rat
7746684LOC102550225septin-7-like192229721722299537Rat
7613847LOC102557406carboxylesterase 1E-like192263212722637621Rat
7714193LOC102554654uncharacterized LOC102554654191258259412592274Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10715D19Arb1209191346786013468069Ratregion
10716D19Mit15170191346791713468079Ratregion
33802D19Mit2193191230572012305899Ratregion
33917D19Mit4257191560502315605265Ratregion
34312D19Mgh4100191032310210323180Ratregion
33698D19Mit12136191896158218961714Ratregion
36165D19Rat13227192306926523069484Ratregion
37668D19Rat42231192069611320696349Ratregion
35747D19Rat26168191970939619709566Ratregion
35775D19Rat27135191857978518579915Ratregion
35959D19Rat15160191432468814324854Ratregion
39760D19Rat93239191954154819541787Ratregion
39824D19Rat82127191184212211842255Ratregion
38008D19Rat39249191935220919352458Ratregion
38032D19Rat101203191511459815114789Ratregion
38166D19Rat36223191078978010789999Ratregion
38302D19Rat52164191456772514567885Ratregion
40648D19Rat77226192019759820197835Ratregion
38502D19Rat44141191514895115149088Ratregion
38534D19Rat47228191242990612430166Ratregion
38540D19Rat55210191484453914844749Ratregion
38622D19Rat56145191054695810547097Ratregion
40098D19Rat94173191406267514062848Ratregion
39074D19Rat31200191909853219098733Ratregion
39466D19Rat73247192158502321585279Ratregion
41312D19Rat78309191442105914421354Ratregion
40846D19Rat79139191053299010533122Ratregion
41768D19Rat96208192086060220860801Ratregion
43127D19Rat122213191517895315179140Ratregion
43128D19Rat115201191473348414733670Ratregion
43129D19Rat113238191694793416948168Ratregion
45597D19Got2171191191708211917253Ratregion
45598D19Got1155191089850710898664Ratregion
45601D19Got11160191420491514205075Ratregion
45602D19Got13267191432458514324852Ratregion
45603D19Got6213191535323515353448Ratregion
45604D19Got7209191576412715764336Ratregion
60745D19Rat111221192039314420393369Ratregion
60191D19Got8176191730959617309770Ratregion
61309D19Arb7280191082769110827970Ratregion
66638D19Mco1243192163368521633932Ratregion
1630831D19Got107123192048831520488438Ratregion
1632014D19Got102124191078894610789070Ratregion
1628220D19Got129180191896154018961720Ratregion
1633117D19Got10205191895738918957596Ratregion
1639793D19Got103234191989019119890420Ratregion
1634948D19Got128245191242705712427302Ratregion
1635357D19Got134144191950739919507540Ratregion
1635573D19Got104154191854798618548140Ratregion
1637212D19Got106146192082946420829610Ratregion
7205930Ppp1cb130192298244722982577Ratregion
7205932Ppp1cb462192298221822982680Ratregion
5035891PMC293425P1731191789962517899758Ratregion
5035891PMC293425P1731191789978017899940Ratregion
7206610Irx31503191521380915215312Ratregion
5039292RH127623216191033545710335673Ratregion
5039104RH127515201191955004219550243Ratregion
5036683AU048865212191607998716080201Ratregion
5035657STS-F0399281191043452110434602Ratregion
5035691RH68394160191103495211035112Ratregion
5026004RH130539203191360413313604940Ratregion
5026030RH130639209191955869819558907Ratregion
7206160Irx380191521332215213402Ratregion
7206162Irx51201191464047714641678Ratregion
7206194Herpud1222191059855010598772Ratregion
5028713A009S35148191881200218812150Ratregion
5031722AU047364166191289989412900055Ratregion
5029213RH143946104191103311611033220Ratregion
5034610BF390149167191036253310362700Ratregion
5026636RH132966195192293952822939721Ratregion
5026660RH133052193191047774010477933Ratregion
5026678RH133120187191613004416130231Ratregion
5029375RH144557188191466556014665748Ratregion
5034718BF391454174191067052210670696Ratregion
5026922RH134051190191535115215351341Ratregion
5026940RH134118184192175795821758142Ratregion
5032641RH134758194192152704921527243Ratregion
5027367AI894186144191521351415213658Ratregion
5027369AI608258145191035264910352794Ratregion
5032831RH136650197192037960620379803Ratregion
5032967RH137139210192133099921331209Ratregion
5027695RH70754142191103200911032151Ratregion
5033151RH137786201191587770715877910Ratregion
5030419BE112852168191588236815882536Ratregion
5033333RH138451124191803553918035663Ratregion
502793536.MMHAP63FRD12.seq187191317361613173803Ratregion
5033429RH138801124192174276721742891Ratregion
5033479RH138983184192026931320269497Ratregion
5025682RH129252150192040749420407644Ratregion
5028297D8Mit30765191731535517315420Ratregion
5033705RH139814196191033773410337930Ratregion
5033723RH139880180191521500215215182Ratregion
5033841RH140318131191408838314088514Ratregion
5028490AU04119394192152705421527148Ratregion
5051453AI647796134192180127921801413Ratregion
5051455AI849834115191033722810337343Ratregion
5053615RH142751132192170113121701263Ratregion
5056091RH144177195191033754910337744Ratregion
5056483RH144404216192103615921036375Ratregion
5056781RH144576150191588074715880897Ratregion
5057560BF392176134191128258111282715Ratregion
5056665RH144509133191141611211416245Ratregion
5058072BF386544152191101974311019895Ratregion
5055417RH143789140191103612111036261Ratregion
5059002BF387307165191201191512012080Ratregion
5060014BF400276162191201207012012232Ratregion
5058518BI290655194191722116517221359Ratregion
5054147RH143057202191594320215943404Ratregion
5054465RH143240125191894253018942655Ratregion
5053233RH142530162191960988719610049Ratregion
5050876RH134309183191103167511031858Ratregion
5040794RH128487212191847476818474981Ratregion
5043516RH130070203191893278318932986Ratregion
5044568RH130678187191520462815204815Ratregion
5044908RH130872188191415476314154951Ratregion
5044032RH130371189191099350810993697Ratregion
5046094RH131555211191889255618892767Ratregion
5046284RH131664218192174329221743510Ratregion
5045514RH131221211191094517610945387Ratregion
5047634RH132440191191043436710434558Ratregion
5049216RH133352218191344011013440328Ratregion
5046736RH131925185191062770210627887Ratregion
5049316RH133410182191391169113911873Ratregion
5049316RH133410182192259200722592189Ratregion
5048340RH132847183191588636815886551Ratregion
5042588RH129525199191534942115349620Ratregion
5048570RH132979208191781344717813655Ratregion
5042948RH129740195191157463511574831Ratregion
5040258RH128180211191347363813473849Ratregion
5074958RH138317197191410370414103901Ratregion
5073810RH137652150191164120211641352Ratregion
5072244RH136737120191590694415907064Ratregion
5076972RH139485174191408838314088557Ratregion
5075308RH138519138191035312510353263Ratregion
5074986RH138333213191578227015782483Ratregion
5077458RH139768215191408991414090129Ratregion
5077230RH139637188191104336311043551Ratregion
5079854RH141241180192290963822909732Ratregion
5079854RH141241180192291486622914960Ratregion
5073504RH137474210191103616311036373Ratregion
5080454RH141588194191401355714013751Ratregion
5080500RH141614196191606043016060626Ratregion
5078624RH140451139192026979320269932Ratregion
5071740RH135257219191411382014114039Ratregion
5073940RH137727159191199975411999913Ratregion
5070924RH134785197191512250815122705Ratregion
5072022RH135420190191397015813970346Ratregion
5072110RH136656182191831428518314467Ratregion
5072110RH136656182191831428518314467Ratregion
5072358RH136803154191104339711043551Ratregion
5067716AU047579233192305983523060066Ratregion
5068416AU047158143191439220114392344Ratregion
5069950AU028726119191573360015733719Ratregion
5063786AW535175153191337276513372918Ratregion
5060450BE110092167191420619214206359Ratregion
5060554BE110336214191568789915688113Ratregion
5062440BF403282162191360355613603718Ratregion
5063886BE120169167191553148915531656Ratregion
5062600BE106921158191141330711413465Ratregion
5063668BF404504162191145865611458818Ratregion
5060522BE110273184191337614713376331Ratregion
5063888BE120174172191116466111164833Ratregion
5064022BE120467150191589411215894262Ratregion
5065852AA997159110191045144710451557Ratregion
5064360BF399122170191201223812012408Ratregion
5063134BI295974157191564624515646402Ratregion
5061358BE105057160191594222215942382Ratregion
5063172BE113843173191140865811408831Ratregion
5063258BF404038158191033820510338363Ratregion
5066470AU048337256192289580322895835Ratregion
5061606BF396845123191556810015568223Ratregion
5061636BE105708184191412122914121413Ratregion
5086963BM388355220191194810311948324Ratregion
5087448PMC18111P1150191415484314154993Ratregion
5087690Amfr783191103103211031815Ratregion
5087997Mcmd5472191349625813496730Ratregion
5088235AU048447217191480739814807615Ratregion
5089445AU049160173191731234417312515Ratregion
5090115AU049559208191338329913383507Ratregion
5088005Mem3165192180131621801481Ratregion
5088533AU048626298191747412217474418Ratregion
5088789AU048775127191364171713641844Ratregion
5081182RH142012210191587671815876928Ratregion
5081404AI501448193191587175015871943Ratregion
5080968RH141887180191078819410788374Ratregion
5084884AI103680111191115215611152267Ratregion
5081647BF414418119191106221311062332Ratregion
5085691AI176756159191345652313456682Ratregion
5083711AI009640187191035248910352674Ratregion
5081735AW434310157191609274716092904Ratregion
5503861UniSTS:47291270191346939313470289Ratregion
5503883CES2151191383745413837605Ratregion
5503883CES2151191392688213927033Ratregion
5504226RH47686139191802248918022628Ratregion
5503577UniSTS:464655113191961138119611494Ratregion
5504420PMC19731P1231191105282511053826Ratregion
5504356D16S2710142191817732118177463Ratregion
5504324D16S2601E132192151429021514554Ratregion
5506847G46506173191531415115314324Ratregion
5507309fc03d10.x10191647600916476122Ratregion
5507309fc03d10.x10191647602116476122Ratregion
5506941G32820148191881200218812150Ratregion
5499985UniSTS:235961230191882562518825855Ratregion
5504924Irx551191463922114639272Ratregion
5505204Cbln11405191960922319610628Ratregion
5501498DXS1162474191066797010668444Ratregion
5501822MARC_14423-14424:1010076472:1400192040090020401300Ratregion
Position Markers

Flank 1: (D19Rat13)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21923,069,265 - 23,069,484 (-)MAPPER
Rnor_6.01926,201,726 - 26,201,944NCBI
Rnor_5.01937,177,349 - 37,177,567UniSTS
RGSC_v3.41924,725,428 - 24,725,843RGD
RGSC_v3.41924,725,553 - 24,725,771UniSTS
RGSC_v3.11924,730,254 - 24,730,669RGD
Celera1922,627,236 - 22,627,454UniSTS
FHH x ACI Map1921.7099RGD
FHH x ACI Map1921.7099UniSTS
Cytogenetic Map19q11UniSTS
Peak: (D19Mgh2)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21937,955,789 - 37,955,932 (-)MAPPER
Rnor_6.01941,677,424 - 41,677,566NCBI
Rnor_5.01952,501,044 - 52,501,186UniSTS
RGSC_v3.41939,863,132 - 39,863,275RGD
RGSC_v3.41939,863,133 - 39,863,275UniSTS
RGSC_v3.11939,868,013 - 39,868,156RGD
Celera1937,359,319 - 37,359,461UniSTS
RH 3.4 Map19442.9RGD
RH 3.4 Map19442.9UniSTS
RH 2.0 Map19488.7RGD
FHH x ACI Map1930.2099RGD
Cytogenetic Map19q11-q12UniSTS
Flank 2: (D19Mgh4)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21910,323,102 - 10,323,180 (+)MAPPER
Rnor_6.01910,739,852 - 10,739,929NCBI
Rnor_5.01910,733,889 - 10,733,966UniSTS
RGSC_v3.41910,762,733 - 10,762,811RGD
RGSC_v3.41910,762,734 - 10,762,811UniSTS
RGSC_v3.11910,767,559 - 10,767,637RGD
Celera1910,212,702 - 10,212,779UniSTS
RH 3.4 Map19102.5UniSTS
RH 3.4 Map19102.5RGD
Cytogenetic Map19p12UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1549847Bss8Bone structure and strength QTL 84lumbar vertebra strength trait (VT:0010574)vertebra ultimate force (CMO:0001678)19131963836Rat
61447Tcas1Tongue tumor susceptibility QTL 16.08tongue integrity trait (VT:0010553)squamous cell carcinoma of the tongue maximum tumor diameter (CMO:0001875)19231612147316121Rat
631681Cm12Cardiac mass QTL 123.330.00053heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)19128982497Rat
9590298Uminl5Urine mineral level QTL 53.590.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)19136824771Rat
1331737Uae29Urinary albumin excretion QTL 295.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19409615555283277Rat
2298478Eau8Experimental allergic uveoretinitis QTL 80.0163uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)191715443357337602Rat
1578764Stresp19Stress response QTL 193.60.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)191563020157337602Rat
1558656Prcs1Prostate cancer susceptibility QTL 15prostate integrity trait (VT:0010571)percentage of study population developing ventral prostate tumorous lesions during a period of time (CMO:0000943)191511459834521833Rat
1331788Rf45Renal function QTL 452.818kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)191560502346559041Rat
9590090Insglur8Insulin/glucose ratio QTL 810.810.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)19136824771Rat
724566Uae12Urinary albumin excretion QTL 125urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19218792756457239Rat
724565Tcas5Tongue tumor susceptibility QTL 510.04tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)19997775339654489Rat
61407Scl12Serum cholesterol level QTL 120.001blood HDL cholesterol amount (VT:0000184)serum high density lipoprotein cholesterol level (CMO:0000361)191392640130303727Rat
8552935Pigfal10Plasma insulin-like growth factor 1 level QTL 105.7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)19136824771Rat
61350Bp32Blood pressure QTL 320.012arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)192048357557337602Rat
631840Niddm38Non-insulin dependent diabetes mellitus QTL 383.86blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)191032318023069265Rat
7411549Bw130Body weight QTL 13050.001body mass (VT:0001259)body weight gain (CMO:0000420)191545586057337602Rat
724518Uae19Urinary albumin excretion QTL 195.5urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)19745724942983518Rat
10054132Srcrt9Stress Responsive Cort QTL 92.870.0017blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)19127355345Rat
8694186Bw152Body weight QTL 1523.340.001body mass (VT:0001259)body weight gain (CMO:0000420)1956937445569374Rat
61423Cia14Collagen induced arthritis QTL 143joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)191082797043544039Rat
631678Cm9Cardiac mass QTL 94.270.0001aorta mass (VT:0002845)aorta weight (CMO:0000076)19128982497Rat
7411590Foco7Food consumption QTL 76.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)19124688055Rat
9590250Scort11Serum corticosterone level QTL 1123.450.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)19136824771Rat
2317848Alcrsp21Alcohol response QTL 211.8999999761581420.05response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)19320477748204777Rat
9589102Slep13Serum leptin concentration QTL 134.630.001blood leptin amount (VT:0005667)plasma leptin level (CMO:0000781)1956937445569374Rat
7247442Uae39Urinary albumin excretion QTL 39urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)19218792746708701Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Niddm38

RGD Curation Notes
Note Type Note Reference
qtl_general involved in the development of hyperglycemia after 70% pancreatectomy 619676