Niddm38 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Niddm38 (Non-insulin dependent diabetes mellitus QTL 38) Rattus norvegicus

Symbol: Niddm38
Name: Non-insulin dependent diabetes mellitus QTL 38
RGD ID: 631840
Trait: blood glucose amount   (VT:0000188)    
Measurement Type: blood glucose level   (CMO:0000046)    
LOD Score: 3.86
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21910,323,180 - 23,069,265RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01910,739,929 - 26,201,726RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01910,733,966 - 37,177,349RGDRnor5.0
RGSC_v3.41910,762,811 - 24,725,428RGDRGSC3.4
RGSC_v3.11910,767,637 - 24,730,254RGD
Cross Type: Not Available
Strains Crossed: OLETF F344/NRrrc 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Candidate Gene Status
Cpe is a candidate Gene for Niddm38
Npy5r is a candidate Gene for Niddm38
Npy2r is a candidate Gene for Niddm38

Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
F344/NRrrc  (IEA)
OLETF  (IEA)

References

Related QTLs

Related QTL Description Reference
Bw130 maps to same region RGD:7401255


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
71091Bbs2Bardet-Biedl syndrome 2191090965310944998Rat
619966Adcy7adenylate cyclase 7191874087518798924Rat
2806Hmox1heme oxygenase 1191346628713474082Rat
3117Mt1metallothionein 1191082603210827048Rat
3541Rbl2RB transcriptional corepressor like 2191587685215923632Rat
71001Dnaja2DnaJ heat shock protein family (Hsp40) member A2192149779221516904Rat
3039Man2b1mannosidase, alpha, class 2B, member 1192305509223074398Rat
620186Phkbphosphorylase kinase regulatory subunit beta192101371921210672Rat
620449Siah1siah E3 ubiquitin protein ligase 1192037890820402512Rat
621664Zfp423zinc finger protein 423191911153819407371Rat
621316Mmp2matrix metallopeptidase 2191415465714182870Rat
628594Rasd2RASD family, member 2191359429113605016Rat
621252Mt3metallothionein 3191084875410850158Rat
628732Gnao1G protein subunit alpha o1191103487411192502Rat
621478Pllpplasmolipin191031510410335892Rat
619898Itfg1integrin alpha FG-GAP repeat containing 1192121069721331285Rat
3686Slc12a3solute carrier family 12 member 3191063064910679250Rat
1305179N4bp1Nedd4 binding protein 1192022281120273570Rat
70896Ces1dcarboxylesterase 1D191387349013912035Rat
620818Herpud1homocysteine inducible ER protein with ubiquitin like domain 1191059841110609002Rat
621822Slc6a2solute carrier family 6 member 2191401029214055317Rat
621508Ces1ecarboxylesterase 1E191383315413869627Rat
2571Ces1ccarboxylesterase 1C191392640113955527Rat
1306317Sec61g-ps1Sec61 gamma subunit, pseudogene 1192303725023037626Rat
1305121FtoFTO, alpha-ketoglutarate dependent dioxygenase191528489815692142Rat
1306368Nod2nucleotide-binding oligomerization domain containing 2191837972018422817Rat
1305801Mylk3myosin light chain kinase 3192168508521743587Rat
735100Abcc12ATP binding cassette subfamily C member 12192054929820621991Rat
1306616Mcm5minichromosome maintenance complex component 5191348303013504389Rat
1307424Irx3iroquois homeobox 3191521188215215323Rat
1307787Snx20sorting nexin 20191843593518445108Rat
1307433Psme3ip1proteasome activator subunit 3 interacting protein 1191040140010430059Rat
1311099Rpgrip1lRpgrip1-like191569218915785083Rat
1309916Sall1spalt-like transcription factor 1191800578218022705Rat
1308024Tom1target of myb1 membrane trafficking protein191340548213440384Rat
1311551Amfrautocrine motility factor receptor191099670511032260Rat
1333226Olr1666olfactory receptor 1666192183241321834841Rat
1311437Orc6origin recognition complex, subunit 6192175786721765638Rat
1311525Nup93nucleoporin 93191068421410788009Rat
1311529Tox3TOX high mobility group box family member 3191664833816757151Rat
1309891Brd7bromodomain containing 7191870879218737500Rat
1308895Large1LARGE xylosyl- and glucuronyltransferase 1191160312912048930Rat
1305462Gpt2glutamic--pyruvic transaminase 2192152680021561314Rat
1305310Neto2neuropilin and tolloid like 2192134429921418182Rat
1308706RGD1308706similar to RIKEN cDNA 4921524J17192162639021653869Rat
1308267Heatr3HEAT repeat containing 3191889247718930502Rat
1306795Chd9chromodomain helicase DNA binding protein 9191594153516146220Rat
1309166Nlrc5NLR family, CARD domain containing 5191047763810581023Rat
1309587Tent4bterminal nucleotidyltransferase 4B191880761618868969Rat
1305766Nudt21nudix hydrolase 21191097480010993841Rat
1305466Lonp2lon peptidase 2, peroxisomal192040747520499030Rat
1305783Hmgxb4HMG-box containing 4191336474113403563Rat
1308847Rspry1ring finger and SPRY domain containing 1191035244910403015Rat
1308848Ogfod12-oxoglutarate and iron-dependent oxygenase domain containing 1191094877810974566Rat
1308346CyldCYLD lysine 63 deubiquitinase191831063218373696Rat
1308491Nkd1NKD inhibitor of WNT signaling pathway 1191847634418549380Rat
1308816Cnep1r1CTD nuclear envelope phosphatase 1 regulatory subunit 1191893263118947667Rat
1565666Cesl1carboxylesterase-like 1192267070923006329Rat
1359640LOC291863carboxylesterase-like192256068522592355Rat
1562813Cbln1cerebellin 1 precursor191960876319612572Rat
1562660RGD1562660RGD1562660192250949722513925Rat
1564453LOC501233LRRGT00080192264851922653372Rat
1561919RGD1561919similar to ribosomal protein S18191310714513107646Rat
1311170AktipAKT interacting protein191586681115877123Rat
1549717Ces5acarboxylesterase 5A191146946911499007Rat
1559772RGD1559772similar to Luc7 homolog (S. cerevisiae)-like191239281712393601Rat
1564830Irx6iroquois homeobox 6191433044014336403Rat
1561471Arl2bpADP-ribosylation factor like GTPase 2 binding protein191033692110346555Rat
1585793LOC680996similar to ribosomal protein S15a192005394420054336Rat
1587309LOC364956hypothetical LOC364956192007053220070891Rat
1587310Ybx1-ps6Y box protein 1 related, pseudogene 6191984957919851101Rat
1585808LOC680981similar to ribosomal protein L19192003475320035336Rat
1584830LOC679711similar to RIKEN cDNA 5031410I06192236565222370450Rat
1565518Irx5iroquois homeobox 5191463905214643911Rat
1564492RGD1564492similar to hypothetical protein, 2-6191368393913684509Rat
1583671Ces1acarboxylesterase 1A191395952913986370Rat
1565500Mt4metallothionein 4191086381310865909Rat
1592776Isxintestine-specific homeobox191321855213239754Rat
1593026LOC680301hypothetical protein LOC680301191626166116263204Rat
1589784Vps35VPS35 retromer complex component192176577121801620Rat
1593780LOC685478similar to Serine/threonine-protein phosphatase PP1-beta catalytic subunit (PP-1B)192298007122984653Rat
1592207LOC690757similar to septin 7192203073022033259Rat
1587042LOC680841similar to muscle protein684191904060819041095Rat
1586039LOC498912similar to Alpha- and gamma-adaptin-binding protein p34191207684212078376Rat
1583620Capns2calpain, small subunit 2191410433414105276Rat
1586036Cpne2copine 2191043427710472146Rat
1587786LOC685989hypothetical protein LOC685989192190971921937396Rat
1585876LOC680913hypothetical protein LOC680913191948424819509632Rat
1596406LOC685291similar to spermatogenesis associated glutamate (E)-rich protein 4b192239534322439432Rat
1596470LOC685226similar to spermatogenesis associated glutamate (E)-rich protein 4d192283534722839939Rat
1592345Mt2Ametallothionein 2A191083200910832783Rat
1591794LOC680405similar to L-lactate dehydrogenase A chain (LDH-A) (LDH muscle subunit) (LDH-M)191653834216539830Rat
1597757LOC685125similar to RIKEN cDNA 5031410I06192285219922922593Rat
1642419Ces1fcarboxylesterase 1F191379662313822113Rat
2319732LOC100361640hypothetical LOC100361640191366235413666993Rat
2319922LOC100361545hypothetical LOC100361545191335810313359054Rat
2318841LOC100365541hypothetical LOC100365541192245731422458889Rat
2321096LOC100360964chaperonin containing Tcp1, subunit 3 (gamma)192014643420148027Rat
2321146LOC100360913abhydrolase domain containing 10-like192005483620055779Rat
2323492LOC100359748zinc finger CCCH type, antiviral 1192234391522356408Rat
2323544Zfp791zinc finger protein 791192301841823033580Rat
2325569Mir138-2microRNA 138-2191067419310674274Rat
2324604LOC100363129LRRGT00018-like192163229321650799Rat
2324816LOC100363073nucleophosmin 1-like192078548520786466Rat
2325051Lpcat2lysophosphatidylcholine acyltransferase 2191408838914152742Rat
6491014LOC100911782nucleophosmin-like191833904218339497Rat
6500925LOC100909916trafficking protein particle complex subunit 2-like protein-like192217032722170897Rat
7542010LOC102549475uncharacterized LOC102549475191700136617025361Rat
7505565LOC102557216uncharacterized LOC102557216191827991618287521Rat
7508229LOC102553772uncharacterized LOC102553772191128253111292546Rat
7497501LOC102555119uncharacterized LOC102555119191501392515018390Rat
7509687LOC102547315serine/threonine-protein phosphatase PP1-beta catalytic subunit-like192279295522795089Rat
7532016LOC102549581uncharacterized LOC102549581191722091617225036Rat
7540032LOC102556139uncharacterized LOC102556139191338856413405676Rat
7646717LOC102551322uncharacterized LOC102551322191950545119550814Rat
7613847LOC102557406carboxylesterase 1E-like192263212722637621Rat
7558266LOC10254681260S ribosomal protein L17-like191541316715413687Rat
7637652LOC102547741uncharacterized LOC102547741192035841420365813Rat
7642644LOC10254859340S ribosomal protein S11-like192167532621675840Rat
7661148LOC102556484uncharacterized LOC102556484191530716315311101Rat
7597669LOC102553444uncharacterized LOC102553444191786762617901672Rat
7544409LOC102552540uncharacterized LOC102552540192247128722475693Rat
7546549LOC102551054zinc finger CCCH-type antiviral protein 1-like192280973622811770Rat
7602258LOC102551515uncharacterized LOC102551515191978886119800730Rat
7553468LOC102553339uncharacterized LOC102553339191060920410621955Rat
7714102LOC102548349uncharacterized LOC102548349192154702121554142Rat
7714193LOC102554654uncharacterized LOC102554654191258259412592274Rat
7738559LOC102553576uncharacterized LOC102553576191794803918008876Rat
7696942LOC10255471460S ribosomal protein L13-like191199320111999084Rat
7746684LOC102550225septin-7-like192229721722299537Rat
7678927LOC102553117uncharacterized LOC102553117191745682517471003Rat
7680597LOC102554391uncharacterized LOC102554391192194104622072466Rat
7749912LOC102553609uncharacterized LOC102553609191098224110996806Rat
9215808LOC103694288uncharacterized LOC103694288191344606713466195Rat
9351195LOC103694287uncharacterized LOC103694287191334029913342578Rat
9272283LOC103694302mitogen-activated protein kinase 4 pseudogene192181819721820544Rat
9277655LOC103694285uncharacterized LOC103694285191119310211361540Rat
9301627LOC103694298uncharacterized LOC103694298191770945517769586Rat
9444094LOC103694291small nuclear ribonucleoprotein Sm D3 pseudogene191239602612396454Rat
9415173LOC103694293FUN14 domain-containing protein 2 pseudogene191470626414706743Rat
10398753Crndecolorectal neoplasia differentially expressed191464388714653880Rat
11362355LOC108348901uncharacterized LOC108348901191650019716516868Rat
11371108LOC108353188uncharacterized LOC108353188191373787813771508Rat
11448883LOC108348876U1 small nuclear ribonucleoprotein C pseudogene191595711915960185Rat
11468427LOC108348220zinc finger CCCH-type antiviral protein 1 pseudogene192295988422963318Rat
11469687LOC108353199serine/threonine-protein phosphatase PP1-beta catalytic subunit pseudogene192290367722904690Rat
11362058LOC108348893uncharacterized LOC108348893191090773910909865Rat
11438483LOC108348906uncharacterized LOC108348906191893444518941602Rat
11438506Trnas-aga11transfer RNA serine (anticodon AGA) 11191469978714699867Rat
11447015LOC108348337uncharacterized LOC108348337192218490522189682Rat
11384271LOC108353207uncharacterized LOC108353207192300217723004908Rat
11375248LOC10834896660S ribosomal protein L29 pseudogene191985805419858524Rat
11410734LOC10834889160S ribosomal protein L36 pseudogene191054142010541840Rat
11410986LOC108348898uncharacterized LOC108348898191420786414223664Rat
11478525LOC108348902uncharacterized LOC108348902191649266416500151Rat
11497700LOC108353202disks large homolog 5-like192293511022939810Rat
41086479LOC120093142uncharacterized LOC120093142191377200313777488Rat
41111973LOC120098514uncharacterized LOC120098514191755814117583832Rat
41276456LOC120098665uncharacterized LOC120098665192158988221626464Rat
41139117LOC120098585uncharacterized LOC120098585192297852122980208Rat
41168099LOC120098654zinc finger CCCH-type antiviral protein 1-like192276965122771419Rat
41168625LOC120098599uncharacterized LOC120098599191837558018379594Rat
41323723LOC120098695small nucleolar RNA SNORA17191593431215934444Rat
41323917LOC120098702small nucleolar RNA SNORA17192126084921260963Rat
41141743LOC120098578zinc finger CCCH-type antiviral protein 1-like192299450022996011Rat
41251642LOC120098544uncharacterized LOC120098544191418294614187957Rat
41252508LOC120098653glutamine synthetase-like191986461719865783Rat
41362713LOC120098597uncharacterized LOC120098597191423314514238604Rat
41187483LOC120098663uncharacterized LOC120098663192102015021023136Rat
41391415LOC120098737small nucleolar RNA U3192215375522153962Rat
41097078LOC120098581uncharacterized LOC120098581192281719222885981Rat
41366286LOC120098701small nucleolar RNA SNORA17191735007517350206Rat
41392794LOC120098507igE-binding protein-like192238051822381798Rat
41214423LOC120098690small nucleolar RNA SNORA17192088486820884995Rat
41215232LOC120098751U6 spliceosomal RNA192046621920466325Rat
41370279LOC120098651protein PBDC1-like191480144214807257Rat
41396011LOC120098505DNA-directed RNA polymerase II subunit GRINL1A-like192247816722483342Rat
41396074LOC120098563uncharacterized LOC120098563191759007517607147Rat
41268452LOC120098533uncharacterized LOC120098533192080090120808057Rat
41346441LOC120098583uncharacterized LOC120098583192260705822626254Rat
41347740LOC120098570uncharacterized LOC120098570191053549010539241Rat
41070523LOC120098506serine/threonine-protein phosphatase PP1-beta catalytic subunit-like192245184522454193Rat
41292314LOC120093121serine/threonine-protein phosphatase PP1-beta catalytic subunit-like192184416921935356Rat
41373433LOC120098553uncharacterized LOC120098553191999827520000323Rat
41104662LOC120098652basic proline-rich protein-like191910796619110624Rat
41374160LOC120098488uncharacterized LOC120098488191172141511729015Rat
41294602LOC120098697small nucleolar RNA SNORA17191302640613026533Rat
41164894LOC120098645ice nucleation protein-like192138912621398346Rat
41273870NEWGENE_40934091transfer RNA alanine (anticodon AGC)191293679912936873Rat
41320463LOC120098595uncharacterized LOC120098595192018968520195690Rat
41165301LOC120098642uncharacterized LOC120098642191951463519519525Rat
40944643LOC120098513uncharacterized LOC120098513191479042414801441Rat
40944742LOC120098590uncharacterized LOC120098590191418845714198236Rat
40945959LOC120098593uncharacterized LOC120098593191488138814897369Rat
40998408LOC120098541uncharacterized LOC120098541191941918819443773Rat
40972653LOC120098571uncharacterized LOC120098571191063197710658610Rat
40952774LOC120098500uncharacterized LOC120098500191745648017457299Rat
40956731LOC120098616uncharacterized LOC120098616191994267219950040Rat
40998689LOC120098572uncharacterized LOC120098572191149908711510648Rat
40983054LOC120098521uncharacterized LOC120098521191363755813645090Rat
40937786LOC120098536uncharacterized LOC120098536191722538217232395Rat
41024705LOC120098503uncharacterized LOC120098503191869833118710027Rat
41078009LOC120098580DNA-directed RNA polymerase II subunit GRINL1A-like192287891022880774Rat
41079993LOC120098543uncharacterized LOC120098543191415268914168272Rat
41247345LOC120098733small nucleolar RNA U3191370264613702853Rat
41135224LOC120098678small nucleolar RNA SNORA5191040654810406684Rat
41254820LOC120098502uncharacterized LOC120098502191729079017291512Rat
41257688LOC120098647zinc finger CCCH-type antiviral protein 1-like192239588322397692Rat
41258260LOC120098671U6 spliceosomal RNA192178002821780125Rat
41267554LOC120098573uncharacterized LOC120098573191127295111280480Rat
41299646LOC120098613uncharacterized LOC120098613191233997412350282Rat
41314711LOC120098579zinc finger CCCH-type antiviral protein 1-like192278106322782360Rat
41314813LOC120098586uncharacterized LOC120098586192299752823000324Rat
41224445LOC120098692small nucleolar RNA SNORA17192013072520130852Rat
41235451LOC120098582disks large homolog 5-like192279999622804911Rat
41303095LOC120098515uncharacterized LOC120098515191457940014587212Rat
41064998NEWGENE_40926764transfer RNA proline (anticodon AGG)191792765617927730Rat
41306472LOC120098531uncharacterized LOC120098531191977859619788806Rat
41023938LOC120098523uncharacterized LOC120098523191659814016642551Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10715D19Arb1209191346786013468069Ratregion
10716D19Mit15170191346791713468079Ratregion
33802D19Mit2193191230572012305899Ratregion
33917D19Mit4257191560502315605265Ratregion
34312D19Mgh4100191032310210323180Ratregion
33698D19Mit12136191896158218961714Ratregion
36165D19Rat13227192306926523069484Ratregion
37668D19Rat42231192069611320696349Ratregion
35747D19Rat26168191970939619709566Ratregion
35775D19Rat27135191857978518579915Ratregion
35959D19Rat15160191432468814324854Ratregion
39760D19Rat93239191954154819541787Ratregion
39824D19Rat82127191184212211842255Ratregion
38008D19Rat39249191935220919352458Ratregion
38032D19Rat101203191511459815114789Ratregion
38166D19Rat36223191078978010789999Ratregion
38302D19Rat52164191456772514567885Ratregion
40648D19Rat77226192019759820197835Ratregion
38502D19Rat44141191514895115149088Ratregion
38534D19Rat47228191242990612430166Ratregion
38540D19Rat55210191484453914844749Ratregion
38622D19Rat56145191054695810547097Ratregion
40098D19Rat94173191406267514062848Ratregion
39074D19Rat31200191909853219098733Ratregion
39466D19Rat73247192158502321585279Ratregion
41312D19Rat78309191442105914421354Ratregion
40846D19Rat79139191053299010533122Ratregion
41768D19Rat96208192086060220860801Ratregion
43127D19Rat122213191517895315179140Ratregion
43128D19Rat115201191473348414733670Ratregion
43129D19Rat113238191694793416948168Ratregion
45597D19Got2171191191708211917253Ratregion
45598D19Got1155191089850710898664Ratregion
45601D19Got11160191420491514205075Ratregion
45602D19Got13267191432458514324852Ratregion
45603D19Got6213191535323515353448Ratregion
45604D19Got7209191576412715764336Ratregion
60745D19Rat111221192039314420393369Ratregion
60191D19Got8176191730959617309770Ratregion
61309D19Arb7280191082769110827970Ratregion
66638D19Mco1243192163368521633932Ratregion
1630831D19Got107123192048831520488438Ratregion
1632014D19Got102124191078894610789070Ratregion
1628220D19Got129180191896154018961720Ratregion
1633117D19Got10205191895738918957596Ratregion
1639793D19Got103234191989019119890420Ratregion
1634948D19Got128245191242705712427302Ratregion
1635357D19Got134144191950739919507540Ratregion
1635573D19Got104154191854798618548140Ratregion
1637212D19Got106146192082946420829610Ratregion
7205930Ppp1cb130192298244722982577Ratregion
7205932Ppp1cb462192298221822982680Ratregion
5035891PMC293425P1731191789978017899940Ratregion
5035891PMC293425P1731191789962517899758Ratregion
7206610Irx31503191521380915215312Ratregion
5039292RH127623216191033545710335673Ratregion
5039104RH127515201191955004219550243Ratregion
5036683AU048865212191607998716080201Ratregion
5035657STS-F0399281191043452110434602Ratregion
5035691RH68394160191103495211035112Ratregion
5026004RH130539203191360413313604940Ratregion
5026030RH130639209191955869819558907Ratregion
7206160Irx380191521332215213402Ratregion
7206162Irx51201191464047714641678Ratregion
7206194Herpud1222191059855010598772Ratregion
5028713A009S35148191881200218812150Ratregion
5031722AU047364166191289989412900055Ratregion
5029213RH143946104191103311611033220Ratregion
5034610BF390149167191036253310362700Ratregion
5026636RH132966195192293952822939721Ratregion
5026660RH133052193191047774010477933Ratregion
5026678RH133120187191613004416130231Ratregion
5029375RH144557188191466556014665748Ratregion
5034718BF391454174191067052210670696Ratregion
5026922RH134051190191535115215351341Ratregion
5026940RH134118184192175795821758142Ratregion
5032641RH134758194192152704921527243Ratregion
5027367AI894186144191521351415213658Ratregion
5027369AI608258145191035264910352794Ratregion
5032831RH136650197192037960620379803Ratregion
5032967RH137139210192133099921331209Ratregion
5027695RH70754142191103200911032151Ratregion
5033151RH137786201191587770715877910Ratregion
5030419BE112852168191588236815882536Ratregion
5033333RH138451124191803553918035663Ratregion
502793536.MMHAP63FRD12.seq187191317361613173803Ratregion
5033429RH138801124192174276721742891Ratregion
5033479RH138983184192026931320269497Ratregion
5025682RH129252150192040749420407644Ratregion
5028297D8Mit30765191731535517315420Ratregion
5033705RH139814196191033773410337930Ratregion
5033723RH139880180191521500215215182Ratregion
5033841RH140318131191408838314088514Ratregion
5028490AU04119394192152705421527148Ratregion
5051453AI647796134192180127921801413Ratregion
5051455AI849834115191033722810337343Ratregion
5053615RH142751132192170113121701263Ratregion
5056091RH144177195191033754910337744Ratregion
5056483RH144404216192103615921036375Ratregion
5056781RH144576150191588074715880897Ratregion
5057560BF392176134191128258111282715Ratregion
5056665RH144509133191141611211416245Ratregion
5058072BF386544152191101974311019895Ratregion
5055417RH143789140191103612111036261Ratregion
5059002BF387307165191201191512012080Ratregion
5060014BF400276162191201207012012232Ratregion
5058518BI290655194191722116517221359Ratregion
5054147RH143057202191594320215943404Ratregion
5054465RH143240125191894253018942655Ratregion
5053233RH142530162191960988719610049Ratregion
5050876RH134309183191103167511031858Ratregion
5040794RH128487212191847476818474981Ratregion
5043516RH130070203191893278318932986Ratregion
5044568RH130678187191520462815204815Ratregion
5044908RH130872188191415476314154951Ratregion
5044032RH130371189191099350810993697Ratregion
5046094RH131555211191889255618892767Ratregion
5046284RH131664218192174329221743510Ratregion
5045514RH131221211191094517610945387Ratregion
5047634RH132440191191043436710434558Ratregion
5049216RH133352218191344011013440328Ratregion
5046736RH131925185191062770210627887Ratregion
5049316RH133410182192259200722592189Ratregion
5049316RH133410182191391169113911873Ratregion
5048340RH132847183191588636815886551Ratregion
5042588RH129525199191534942115349620Ratregion
5048570RH132979208191781344717813655Ratregion
5042948RH129740195191157463511574831Ratregion
5040258RH128180211191347363813473849Ratregion
5074958RH138317197191410370414103901Ratregion
5073810RH137652150191164120211641352Ratregion
5072244RH136737120191590694415907064Ratregion
5076972RH139485174191408838314088557Ratregion
5075308RH138519138191035312510353263Ratregion
5074986RH138333213191578227015782483Ratregion
5077458RH139768215191408991414090129Ratregion
5077230RH139637188191104336311043551Ratregion
5079854RH141241180192291486622914960Ratregion
5079854RH141241180192290963822909732Ratregion
5073504RH137474210191103616311036373Ratregion
5080454RH141588194191401355714013751Ratregion
5080500RH141614196191606043016060626Ratregion
5078624RH140451139192026979320269932Ratregion
5071740RH135257219191411382014114039Ratregion
5073940RH137727159191199975411999913Ratregion
5070924RH134785197191512250815122705Ratregion
5072022RH135420190191397015813970346Ratregion
5072110RH136656182191831428518314467Ratregion
5072110RH136656182191831428518314467Ratregion
5072358RH136803154191104339711043551Ratregion
5067716AU047579233192305983523060066Ratregion
5068416AU047158143191439220114392344Ratregion
5069950AU028726119191573360015733719Ratregion
5063786AW535175153191337276513372918Ratregion
5060450BE110092167191420619214206359Ratregion
5060554BE110336214191568789915688113Ratregion
5062440BF403282162191360355613603718Ratregion
5063886BE120169167191553148915531656Ratregion
5062600BE106921158191141330711413465Ratregion
5063668BF404504162191145865611458818Ratregion
5060522BE110273184191337614713376331Ratregion
5063888BE120174172191116466111164833Ratregion
5064022BE120467150191589411215894262Ratregion
5065852AA997159110191045144710451557Ratregion
5064360BF399122170191201223812012408Ratregion
5063134BI295974157191564624515646402Ratregion
5061358BE105057160191594222215942382Ratregion
5063172BE113843173191140865811408831Ratregion
5063258BF404038158191033820510338363Ratregion
5066470AU048337256192289580322895835Ratregion
5061606BF396845123191556810015568223Ratregion
5061636BE105708184191412122914121413Ratregion
5086963BM388355220191194810311948324Ratregion
5087448PMC18111P1150191415484314154993Ratregion
5087690Amfr783191103103211031815Ratregion
5087997Mcmd5472191349625813496730Ratregion
5088235AU048447217191480739814807615Ratregion
5089445AU049160173191731234417312515Ratregion
5090115AU049559208191338329913383507Ratregion
5088005Mem3165192180131621801481Ratregion
5088533AU048626298191747412217474418Ratregion
5088789AU048775127191364171713641844Ratregion
5081182RH142012210191587671815876928Ratregion
5081404AI501448193191587175015871943Ratregion
5080968RH141887180191078819410788374Ratregion
5084884AI103680111191115215611152267Ratregion
5081647BF414418119191106221311062332Ratregion
5085691AI176756159191345652313456682Ratregion
5083711AI009640187191035248910352674Ratregion
5081735AW434310157191609274716092904Ratregion
5503861UniSTS:47291270191346939313470289Ratregion
5503883CES2151191392688213927033Ratregion
5503883CES2151191383745413837605Ratregion
5504226RH47686139191802248918022628Ratregion
5503577UniSTS:464655113191961138119611494Ratregion
5504420PMC19731P1231191105282511053826Ratregion
5504356D16S2710142191817732118177463Ratregion
5504324D16S2601E132192151429021514554Ratregion
5506847G46506173191531415115314324Ratregion
5507309fc03d10.x10191647602116476122Ratregion
5507309fc03d10.x10191647600916476122Ratregion
5506941G32820148191881200218812150Ratregion
5499985UniSTS:235961230191882562518825855Ratregion
5504924Irx551191463922114639272Ratregion
5505204Cbln11405191960922319610628Ratregion
5501498DXS1162474191066797010668444Ratregion
5501822MARC_14423-14424:1010076472:1400192040090020401300Ratregion
Position Markers

Flank 1: (D19Rat13)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21923,069,265 - 23,069,484 (-)MAPPER
Rnor_6.01926,201,726 - 26,201,944NCBI
Rnor_5.01937,177,349 - 37,177,567UniSTS
RGSC_v3.41924,725,428 - 24,725,843RGD
RGSC_v3.41924,725,553 - 24,725,771UniSTS
RGSC_v3.11924,730,254 - 24,730,669RGD
Celera1922,627,236 - 22,627,454UniSTS
FHH x ACI Map1921.7099RGD
FHH x ACI Map1921.7099UniSTS
Cytogenetic Map19q11UniSTS
Peak: (D19Mgh2)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21937,955,789 - 37,955,932 (-)MAPPER
Rnor_6.01941,677,424 - 41,677,566NCBI
Rnor_5.01952,501,044 - 52,501,186UniSTS
RGSC_v3.41939,863,132 - 39,863,275RGD
RGSC_v3.41939,863,133 - 39,863,275UniSTS
RGSC_v3.11939,868,013 - 39,868,156RGD
Celera1937,359,319 - 37,359,461UniSTS
RH 3.4 Map19442.9RGD
RH 3.4 Map19442.9UniSTS
RH 2.0 Map19488.7RGD
FHH x ACI Map1930.2099RGD
Cytogenetic Map19q11-q12UniSTS
Flank 2: (D19Mgh4)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21910,323,102 - 10,323,180 (+)MAPPER
Rnor_6.01910,739,852 - 10,739,929NCBI
Rnor_5.01910,733,889 - 10,733,966UniSTS
RGSC_v3.41910,762,733 - 10,762,811RGD
RGSC_v3.41910,762,734 - 10,762,811UniSTS
RGSC_v3.11910,767,559 - 10,767,637RGD
Celera1910,212,702 - 10,212,779UniSTS
RH 3.4 Map19102.5UniSTS
RH 3.4 Map19102.5RGD
Cytogenetic Map19p12UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
7411590Foco7Food consumption QTL 76.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)19124688055Rat
10054132Srcrt9Stress Responsive Cort QTL 92.870.0017blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)19127355345Rat
631678Cm9Cardiac mass QTL 94.270.0001aorta mass (VT:0002845)aorta weight (CMO:0000076)19128982497Rat
631681Cm12Cardiac mass QTL 123.330.00053heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)19128982497Rat
1549847Bss8Bone structure and strength QTL 84lumbar vertebra strength trait (VT:0010574)vertebra ultimate force (CMO:0001678)19131963836Rat
9590298Uminl5Urine mineral level QTL 53.590.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)19136824771Rat
8552935Pigfal10Plasma insulin-like growth factor 1 level QTL 105.7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)19136824771Rat
9590250Scort11Serum corticosterone level QTL 1123.450.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)19136824771Rat
9590090Insglur8Insulin/glucose ratio QTL 810.810.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)19136824771Rat
9589102Slep13Serum leptin concentration QTL 134.630.001blood leptin amount (VT:0005667)plasma leptin level (CMO:0000781)1956937445569374Rat
8694186Bw152Body weight QTL 1523.340.001body mass (VT:0001259)body weight gain (CMO:0000420)1956937445569374Rat
7247442Uae39Urinary albumin excretion QTL 39urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)19218792746708701Rat
724566Uae12Urinary albumin excretion QTL 125urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19218792756457239Rat
61447Tcas1Tongue tumor susceptibility QTL 16.08tongue integrity trait (VT:0010553)squamous cell carcinoma of the tongue maximum tumor diameter (CMO:0001875)19231612147316121Rat
2317848Alcrsp21Alcohol response QTL 211.8999999761581420.05response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)19320477748204777Rat
1331737Uae29Urinary albumin excretion QTL 295.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19409615555283277Rat
724518Uae19Urinary albumin excretion QTL 195.5urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)19745724942983518Rat
724565Tcas5Tongue tumor susceptibility QTL 510.04tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)19997775339654489Rat
631840Niddm38Non-insulin dependent diabetes mellitus QTL 383.86blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)191032318023069265Rat
61423Cia14Collagen induced arthritis QTL 143joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)191082797043544039Rat
61407Scl12Serum cholesterol level QTL 120.001blood HDL cholesterol amount (VT:0000184)serum high density lipoprotein cholesterol level (CMO:0000361)191392640130303727Rat
1558656Prcs1Prostate cancer susceptibility QTL 15prostate integrity trait (VT:0010571)percentage of study population developing ventral prostate tumorous lesions during a period of time (CMO:0000943)191511459834521833Rat
7411549Bw130Body weight QTL 13050.001body mass (VT:0001259)body weight gain (CMO:0000420)191545586057337602Rat
1331788Rf45Renal function QTL 452.818kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)191560502346559041Rat
1578764Stresp19Stress response QTL 193.60.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)191563020157337602Rat
2298478Eau8Experimental allergic uveoretinitis QTL 80.0163uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)191715443357337602Rat
61350Bp32Blood pressure QTL 320.012arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)192048357557337602Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Niddm38

RGD Curation Notes
Note Type Note Reference
qtl_general involved in the development of hyperglycemia after 70% pancreatectomy 619676