Alc7 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Alc7 (Alcohol consumption QTL 7) Rattus norvegicus

Symbol: Alc7
Name: Alcohol consumption QTL 7
RGD ID: 631830
Also known as: Alcohol preference QTL 7
Trait: consumption behavior trait   (VT:0002069)    
Measurement Type: ethanol drink intake rate   (CMO:0001407)    
LOD Score: 2.9
P Value: Not Available
Variance: Not Available
Inheritance Type: additive
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2161 - 26,727,669RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0161 - 27,556,253RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0161 - 27,496,499RGDRnor5.0
RGSC_v3.4161 - 26,804,456RGDRGSC3.4
RGSC_v3.1160 - 26,804,454RGD
Cross Type: Intercross
Strains Crossed: HAD1 LAD1 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method
scale  (IDA)

Vertebrate Trait

Rat Strain
HAD1  (IEA)
LAD1  (IEA)

References

Related QTLs

Related QTL Description Reference
Alc12 interacts with RGD:731212
Alc10 interacts with RGD:731212
Alc9 interacts with RGD:731212
Alc11 maps to same region RGD:731212
Alc13 maps to same region RGD:731212


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
3050Mat1amethionine adenosyltransferase 1A161698308417001284Rat
67383Prkcdprotein kinase C, delta1657692265807214Rat
619941Ncanneurocan161930196919328436Rat
3693Slc18a1solute carrier family 18 member A1162065326820687051Rat
619971Plvapplasmalemma vesicle associated protein161818498518197301Rat
70881Itih4inter-alpha-trypsin inhibitor heavy chain 41660805396095710Rat
3545Rbp3retinol binding protein 31692675389276006Rat
69250Wnt5aWnt family member 5A1636956673718234Rat
3199Npy5rneuropeptide Y receptor Y5162305542723063384Rat
3899Tpm4tropomyosin 4161768441517698456Rat
70996Sncgsynuclein, gamma1697005139705751Rat
61864Npy4rneuropeptide Y receptor Y41694678019469057Rat
3528Rab3aRAB3A, member RAS oncogene family161868418518688297Rat
70490Nat1N-acetyltransferase 1162221821722238516Rat
70492Nat2N-acetyltransferase 2162220736222238513Rat
2945JundJunD proto-oncogene, AP-1 transcription factor subunit161873412118735799Rat
2377Colqcollagen like tail subunit of asymmetric acetylcholinesterase1667318506824973Rat
2394Cpecarboxypeptidase E162503027625142231Rat
3113Msmbmicroseminoprotein, beta1673665367387124Rat
61999Sfmbt1Scm-like with four mbt domains 11658890466009860Rat
70989Bmpr1abone morphogenetic protein receptor type 1A1697363909829825Rat
2708Glud1glutamate dehydrogenase 11696403129673961Rat
3665Sftpa1surfactant protein A1161700818017011686Rat
3667Sftpdsurfactant protein D161704649117058968Rat
620284Atp6v1b2ATPase H+ transporting V1 subunit B2162061751520641651Rat
620117Insl3insulin-like 3161839868218400566Rat
727849Bst2bone marrow stromal cell antigen 2161821740418220979Rat
621506Mapk8mitogen-activated protein kinase 81686388978721960Rat
620281Msmo1methylsterol monooxygenase 1162498068024997927Rat
628670Ppifpeptidylprolyl isomerase F1612571971263919Rat
619849Hacl12-hydroxyacyl-CoA lyase 11668268816863027Rat
68344Uba52ubiquitin A-52 residue ribosomal protein fusion product 1161891861418920807Rat
621275Arf4ADP-ribosylation factor 41618966921913267Rat
620387Pargpoly (ADP-ribose) glycohydrolase1674364297544276Rat
620420Cdhr1cadherin-related family member 1161284343612863321Rat
619722Unc13aunc-13 homolog A161833622918381811Rat
628698Zfp709zinc finger protein 709161790759917920047Rat
621165Mk1Mk1 protein161878081918783308Rat
3198Npy1rneuropeptide Y receptor Y1162303778823047330Rat
3017Lpllipoprotein lipase162083005520853855Rat
3055Mbl1mannose binding lectin 1161702914617035187Rat
621701Opn4opsin 41699204089929580Rat
70973Cacna1dcalcium voltage-gated channel subunit alpha1 D1652271575521163Rat
631354Gnl3G protein nucleolar 31662074026213491Rat
619990Dnah12dynein, axonemal, heavy chain 121619363542092663Rat
3146Myo9bmyosin IXb161794537918030114Rat
2962Kcnn1potassium calcium-activated channel subfamily N member 1161857485818597780Rat
620706Homer3homer scaffold protein 3161913217719142739Rat
621144Rab8aRAB8A, member RAS oncogene family161765402717675385Rat
68366Grid1glutamate ionotropic receptor delta type subunit 1161013856410885803Rat
621685Nr2f6nuclear receptor subfamily 2, group F, member 6161804601218053914Rat
727964Syt15synaptotagmin 151695324789543288Rat
1304678Gdf1growth differentiation factor 1161909730919112519Rat
628607Lrit1leucine-rich repeat, Ig-like and transmembrane domains 1161282207612830003Rat
1303133Pgpep1pyroglutamyl-peptidase I161877056318782968Rat
708372Erc2ELKS/RAB6-interacting/CAST family member 21628127123673624Rat
708565Lzts1leucine zipper tumor suppressor 1162054275620598204Rat
620220Sh3bp5SH3-domain binding protein 51665834626678344Rat
2674Gdf15growth differentiation factor 15161880531218807893Rat
621512Gdf10growth differentiation factor 101692371829250537Rat
1304855Capn7calpain 71665456306581908Rat
621036Tkttransketolase1657237645748702Rat
735166Chdhcholine dehydrogenase1651942695225541Rat
62072Slc18a3solute carrier family 18 member A31677136307716491Rat
620872F2rl3F2R like thrombin or trypsin receptor 3161711744117119434Rat
628616Drgxdorsal root ganglia homeobox1678548497884404Rat
1302976Rpl18aribosomal protein L18A161854257218544578Rat
620633Itih3inter-alpha trypsin inhibitor, heavy chain 31661019226117154Rat
621040Rps24ribosomal protein S24168953894267Rat
621795Dnah1dynein, axonemal, heavy chain 11664555146517103Rat
1306808Lsm4LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated161875548118761106Rat
3863Timm23translocase of inner mitochondrial membrane 231674103087436392Rat
735220Mvb12amultivesicular body subunit 12A161825222718257111Rat
69267Slc5a5solute carrier family 5 member 5161854670918556698Rat
631361Cacna2d3calcium voltage-gated channel auxiliary subunit alpha2delta 31640984394912498Rat
620025Il12rb1interleukin 12 receptor subunit beta 1161862022818633207Rat
620927Slc27a1solute carrier family 27 member 1161827898418300173Rat
1305574Polr3aRNA polymerase III subunit A164917888178Rat
1307237Arhgap22Rho GTPase activating protein 221684738068631552Rat
1309388Appl1adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 11621185032166741Rat
1305148Marchf1membrane associated ring-CH-type finger 1162325555424114290Rat
1305151B3gnt3UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3161840140518410821Rat
1306079Sema3gsemaphorin 3G1664135896425221Rat
1304711Ints10integrator complex subunit 10162091522320947146Rat
1305557Tmem59ltransmembrane protein 59-like161894137018945381Rat
1305689Tmem254transmembrane protein 2541615039311507819Rat
1305693Abhd8abhydrolase domain containing 8161814446418151201Rat
1306388Klhl2kelch-like family member 2162486076324973348Rat
1305100Pbx4PBX homeobox 4161955508919590054Rat
2940Jak3Janus kinase 3161838633018398542Rat
1304995Nek4NIMA-related kinase 41661449006185376Rat
1306042Sugp2SURP and G patch domain containing 2161915995119191412Rat
68341Pik3r2phosphoinositide-3-kinase regulatory subunit 2161866551718674067Rat
1306120Tll1tolloid-like 1162550914625710330Rat
1307001Pgls6-phosphogluconolactonase161830031718305803Rat
1307583Smim4small integral membrane protein 41663166296320509Rat
1305714Tspan14tetraspanin 14161678424216841368Rat
1307683Fcho1FCH and mu domain containing endocytic adaptor 1161841345218430795Rat
1303129Selenokselenoprotein K1651520665160648Rat
1304767Tktl2transketolase-like 2162320246023209741Rat
1305367Gtpbp3GTP binding protein 3161817576618180857Rat
735152StimateSTIM activating enhancer1660133926070829Rat
1304626Ccser2coiled-coil serine-rich protein 2161261310312725764Rat
1304627Chatcholine O-acetyltransferase1676573627717093Rat
1306660Use1unconventional SNARE in the ER 1161803828418041826Rat
1306662Plac9placenta associated 91614594501474222Rat
727918Pde4cphosphodiesterase 4C161869072718711555Rat
1306099Itih1inter-alpha trypsin inhibitor, heavy chain 11661222466136363Rat
1306691Armc6armadillo repeat containing 6161919110619201528Rat
1307618Csgalnact1chondroitin sulfate N-acetylgalactosaminyltransferase 1162099521021330586Rat
1306033Atp13a1ATPase 13A1161961515619631546Rat
1307575Nat3N-acetyltransferase 3162215043122151303Rat
1306802Naf1nuclear assembly factor 1 ribonucleoprotein162283758622868293Rat
1306785CopeCOPI coat complex subunit epsilon161911487119125527Rat
1305261Cyp4f18cytochrome P450, family 4, subfamily f, polypeptide 18161776354317804944Rat
2378Compcartilage oligomeric matrix protein161904720619055584Rat
1305524Nt5dc25'-nucleotidase domain containing 21663224856330538Rat
1311461Mmrn2multimerin 21697059259727405Rat
1308638Phf7PHD finger protein 71664335356446314Rat
1309911Anxa11annexin A111614123731457814Rat
1308408Hapln4hyaluronan and proteoglycan link protein 4161933310619341243Rat
1305222Tma16translation machinery associated 16 homolog162323668623252706Rat
1359397Mrpl34mitochondrial ribosomal protein L34161815247018153205Rat
1310758Ifi30IFI30, lysosomal thiol reductase161867565118679857Rat
1311591Sh2d4bSH2 domain containing 4B161667351816783076Rat
1311534Oxnad1oxidoreductase NAD-binding domain containing 11672934707322540Rat
1310423Vstm4V-set and transmembrane domain containing 41681203368200272Rat
1310859Ushbp1USH1 protein network component harmonin binding protein 1161805732118067933Rat
1334022Olr1648-psolfactory receptor pseudogene 1648161772988417730788Rat
1311509Ercc6ERCC excision repair 6, chromatin remodeling factor1677649837835587Rat
1311878Actr8actin related protein 81651641315186353Rat
1310916Ogdhloxoglutarate dehydrogenase L1675783057604385Rat
1310931Ccdc124coiled-coil domain containing 124161856674518572564Rat
1311565Haus8HAUS augmin-like complex, subunit 8161793081917945254Rat
1312034Klhl26kelch-like family member 26161895212318977328Rat
1559508RGD1559508similar to hypothetical protein 4930474N05161133253511342384Rat
1359166LOC364556similar to Ab1-351162613664026137849Rat
1309002Colgalt1collagen beta(1-O)galactosyltransferase 1161831979618332106Rat
1308670Fkbp8FKBP prolyl isomerase 8161889560818902648Rat
1310975Pde12phosphodiesterase 121619153861925427Rat
1305672Spock3SPARC/osteonectin, cwcv and kazal like domains proteoglycan 3162638289526815943Rat
1306164Zcchc24zinc finger CCHC-type containing 241612745441326664Rat
1308184Ankle1ankyrin repeat and LEM domain containing 1161807641318082356Rat
1309921Tnnc1troponin C1, slow skeletal and cardiac type1664008016405419Rat
1308296Nxnl1nucleoredoxin-like 1161827060418279797Rat
727804Mustn1musculoskeletal, embryonic nuclear protein 11660729086075158Rat
1306950Nischnischarin1663643706400675Rat
1305974Cers1ceramide synthase 1161909730919112519Rat
1307991Sh2d4aSH2 domain containing 4A162133901021409360Rat
1305316Btdbiotinidase1668630686894345Rat
1308759Mau2MAU2 sister chromatid cohesion factor161938384719414996Rat
1309174Rgrretinal G protein coupled receptor161280159412816402Rat
1311371Crlf1cytokine receptor-like factor 1161892472218936049Rat
1307674Slmapsarcolemma associated protein1616672051785200Rat
1308266Map1smicrotubule-associated protein 1S161851675918527777Rat
1309835Zfp488zinc finger protein 4881692823949294129Rat
1311620Zmiz1zinc finger, MIZ-type containing 11610270831232616Rat
1309676Prxl2aperoxiredoxin like 2A161686660116886378Rat
1309341Tmem192transmembrane protein 192162474016624760994Rat
1306064Dennd6aDENN domain containing 6A1618370191885420Rat
1309243Calr3calreticulin 3161739606417423166Rat
1307703Tmem161atransmembrane protein 161A161923763819248151Rat
1307719Anxa8annexin A81693971449412072Rat
1307653Ap1m1adaptor related protein complex 1 subunit mu 1161758688617602410Rat
1311390Rfxankregulatory factor X-associated ankyrin-containing protein161928085719288886Rat
1311392Il17rbinterleukin 17 receptor B1651804315194125Rat
1308064Mpv17l2MPV17 mitochondrial inner membrane protein like 2161868010618684212Rat
1310672Arhgef3Rho guanine nucleotide exchange factor 31623015732581951Rat
1308922Gprin2G protein regulated inducer of neurite outgrowth 21694964529512672Rat
1309659Arrdc2arrestin domain containing 2161860189718606029Rat
1305279Cherpcalcium homeostasis endoplasmic reticulum protein161736745517380507Rat
1307901Tmem38atransmembrane protein 38a161725816017274204Rat
1310596Gatad2aGATA zinc finger domain containing 2A161942957819520320Rat
1309524Med26mediator complex subunit 26161729972217350168Rat
1309812Ptpn20protein tyrosine phosphatase, non-receptor type 201688855858949805Rat
1310057Eaf1ELL associated factor 11666983226713071Rat
1311738Lrrc18leucine rich repeat containing 181682535248277439Rat
1562866Kxd1KxDL motif containing 1161889534318916266Rat
1564875Ldb3LIM domain binding 31698557689920108Rat
1563858Hesx1HESX homeobox 11621918522193957Rat
1564941RGD1564941similar to ankyrin repeat domain 26162035831520422344Rat
1566067RGD1566067similar to hypothetical protein 4930474N05161170214611718153Rat
1559804RGD1559804similar to hypothetical protein 4930474N05161122480311231972Rat
1563748PotemPOTE ankyrin domain family member M162019364620311924Rat
1563946Ano8anoctamin 8161816385318173248Rat
1559764Tssk6testis-specific serine kinase 6161952362619526074Rat
1565652Frmpd2FERM and PDZ domain containing 21687576428877307Rat
1566103Niban3niban apoptosis regulator 3161830712218318589Rat
1564325RGD1564325similar to ribosomal protein S241665216706522244Rat
1563190AntxrlANTXR like1693622119387762Rat
1560429RGD1560429similar to hypothetical protein 4930474N05161134410911353404Rat
1565708Eps15l1epidermal growth factor receptor pathway substrate 15-like 1161742634517501677Rat
1564142Wdfy4WDFY family member 41682218538450494Rat
1561145Tmem273transmembrane protein 2731680495658081981Rat
1563236Yjefn3YjeF N-terminal domain containing 3161953374219539759Rat
1562654Rft1RFT1 homolog1658270635861120Rat
1560857RGD1560857similar to RIKEN cDNA 2900016D05162110880721109887Rat
1359619Ssbp4single stranded DNA binding protein 4161882801418838941Rat
1560873Ccdc66coiled-coil domain containing 661626621252694031Rat
1563356RGD1563356similar to hypothetical protein 4930474N05161164465511649507Rat
1559678Nrg3neuregulin 3161422927015352505Rat
1309125Spcs1signal peptidase complex subunit 11661902086191776Rat
1310496Sugp1SURP and G patch domain containing 1161935265919383533Rat
1311938Bap1Brca1 associated protein 11664467096455535Rat
1359299Zfp868zinc finger protein 868161976263419777148Rat
1359301Ghitmgrowth hormone inducible transmembrane protein161288555112897887Rat
1563014Ncoa4nuclear receptor coactivator 41673892227409564Rat
1311053Dux4double homeobox 41615584301570045Rat
1359516Babam1BRISC and BRCA1 A complex member 1161806883018074938Rat
1359220Klf2Kruppel-like factor 2161752177317523723Rat
1564818Lrrc25leucine rich repeat containing 25161880688818813726Rat
1311121Ellelongation factor for RNA polymerase II161884502518891484Rat
1311124Ddx49DEAD-box helicase 49161912538819133042Rat
1561190Nr2c2apnuclear receptor 2C2-associated protein161928845419290940Rat
1359423Isyna1inositol-3-phosphate synthase 1161883914318841979Rat
1359565Mettl6methyltransferase like 61666838206699013Rat
1311157Cilp2cartilage intermediate layer protein 2161953975519547191Rat
1311847RGD1311847similar to 1700030K09Rik protein161737999917396088Rat
1564668Lrit2leucine-rich repeat, Ig-like and transmembrane domains 2161283505112839482Rat
1561298Dcp1adecapping mRNA 1A1656567885702151Rat
1566239Rex1bdrequired for excision 1-B domain containing161892152418924526Rat
1565219Cphx1cytoplasmic polyadenylated homeobox 11615338831537248Rat
1565495RGD1565495similar to retinoblastoma binding protein 7161807986118084413Rat
1587639Mast3microtubule associated serine/threonine kinase 3161863676418663852Rat
1359293Glt8d1glycosyltransferase 8 domain containing 11661922696207227Rat
1584009LOC690162similar to Alpha-enolase (2-phospho-D-glycerate hydro-lyase) (Non-neural enolase) (NNE) (Enolase 1)162257410322575435Rat
1562641RGD1562641similar to hypothetical protein 4930474N05161166431011672032Rat
1586821LOC683469similar to RNA polymerase II transcription factor SIII subunit A2161407451414076458Rat
1562508RGD1562508similar to hypothetical protein 4930474N05161139887411402678Rat
1565017RGD1565017similar to RS21-C6 protein1613929671393868Rat
1565407Ocel1occludin/ELL domain containing 1161804203718045080Rat
1561342Slc35e1solute carrier family 35, member E1161735093817364185Rat
1559708RGD1559708similar to ribosomal protein S10162070306020703551Rat
1559931Ankrd28ankyrin repeat domain 281669184877050244Rat
1565661RGD1565661similar to RIKEN cDNA 3110001I22161311081313111863Rat
1565577GmipGem-interacting protein161960072319614459Rat
1561733Mef2bmyocyte enhancer factor 2B161925300819269514Rat
1565549Pbrm1polybromo 11662135076312895Rat
1584388Fam25afamily with sequence similarity 25, member A1696806689684474Rat
1565534RGD1565534similar to RING finger protein 33162473600924737192Rat
1584153Dda1DET1 and DDB1 associated 1161815631018163938Rat
1582825LOC690289similar to mitochondrial ribosomal protein S25162437145924371971Rat
1582941Borcs8BLOC-1 related complex subunit 8161927430519280969Rat
1565067Shld2shieldin complex subunit 21695449409640323Rat
1561287Fam32afamily with sequence similarity 32, member A161760305417607376Rat
1561336Lpar2lysophosphatidic acid receptor 2161959206719600850Rat
1566160LOC290595hypothetical gene supported by AF152002161286827012875876Rat
1565329RGD1565329similar to hypothetical protein 4930474N05161118070011189203Rat
1587989Sin3bSIN3 transcription regulator family member B161712327717160070Rat
1589127Upf1UPF1, RNA helicase and ATPase161907659419097365Rat
1590566Dph3diphthamide biosynthesis 31672882957293734Rat
1585926LOC679663similar to transcription elongation factor B (SIII), polypeptide 1162025719620258065Rat
1590245Cib3calcium and integrin binding family member 3161762250117631754Rat
1590250LOC685718similar to tumor protein, translationally-controlled 1161247666012477351Rat
1590787LOC498588similar to Cofilin-1 (Cofilin, non-muscle isoform)161011179510114251Rat
1590788LOC498577similar to ribosomal protein L13A1677399027741182Rat
1588820LOC688468similar to phafin 2161702563917026445Rat
1564899RGD1564899similar to chromosome 10 open reading frame 711679105977961900Rat
1589073LOC685813hypothetical protein LOC685813161297457112975485Rat
1589158Crtc1CREB regulated transcription coactivator 1161898819719046913Rat
1586196Gdf2growth differentiation factor 21692554309261429Rat
1588855Dydc1DPY30 domain containing 1161694094616961462Rat
1589889Gapdh-ps2glyceraldehyde-3-phosphate dehydrogenase, pseudogene 2162402997924031270Rat
1588866Dydc2DPY30 domain containing 2161692817216941950Rat
1588793Smim7small integral membrane protein 7161727441717278336Rat
1583250Isca1-ps1iron-sulfur cluster assembly 1 homolog (S. cerevisiae) , pseudogene 1161007967010081279Rat
1589951LOC689627similar to Sp2 transcription factor161978173219806010Rat
1564958RGD1564958similar to glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (EC 1.2.1.12)161537029015371300Rat
1559968Psd3pleckstrin and Sec7 domain containing 3162146564322035846Rat
1590924WaplWAPL cohesin release factor161000552010075270Rat
1586999LOC680885hypothetical protein LOC6808851676342077644876Rat
1565237Il17rdinterleukin 17 receptor D1622284672295126Rat
1586623LOC686073similar to Adenylyl cyclase-associated protein 1 (CAP 1)161617881116194629Rat
1588237LOC680729similar to GDP-mannose 4, 6-dehydratase1665254346526454Rat
1595469Tasortranscription activation suppressor1626068072669902Rat
1597370LOC690318similar to Glycine cleavage system H protein, mitochondrial precursor162464769524660538Rat
1596975Grlf1-ps1glucocorticoid receptor DNA binding factor 1, pseudogene 1162534511025348729Rat
1597457Tm6sf2transmembrane 6 superfamily member 2161934421819351431Rat
1592051LOC364506similar to heterogeneous nuclear ribonucleoprotein A31649574584959246Rat
1592584LOC685564similar to Ral guanine nucleotide dissociation stimulator (RalGEF) (RalGDS)161169017311697034Rat
1592346Slc25a42solute carrier family 25, member 42161921391419251990Rat
1596812Asb14ankyrin repeat and SOCS box-containing 141620955672123259Rat
1596785LOC681303similar to tumor endothelial marker 8 isoform 1 precursor1693315069358175Rat
1592044LOC364546similar to Tubulin alpha-2 chain (Alpha-tubulin 2)162460153824603230Rat
1592045LOC364540similar to golgi autoantigen, golgin subfamily a, 4162229267222294179Rat
1592047LOC364528similar to PRP31 pre-mRNA processing factor 31 homolog161650758616509019Rat
1592048LOC364527similar to Mitochondrial carrier protein CGI-69161626020016261170Rat
1592049LOC364524similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor)161556115315567521Rat
1598050Rpl38-ps3ribosomal protein L38, pseudogene 3161018268810183002Rat
2319713Zfp617zinc finger protein 617161781622117836129Rat
2319149Tmem221transmembrane protein 221161825362218271094Rat
2318713Zfp964zinc finger protein 964161972176519736148Rat
2318714Fam170bfamily with sequence similarity 170, member B1681018998104724Rat
2318899Zfp866zinc finger protein 866161965396619675968Rat
2318938LOC100362043rCG64252-like161150312611636386Rat
2320284LOC100361381hypothetical LOC100361381162223165522232574Rat
2322081Galnt15polypeptide N-acetylgalactosaminyltransferase 151672272327267002Rat
2321348LOC100360810NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4-like1699348329937215Rat
2322173LOC100363883hypothetical LOC100363883161115642811160928Rat
2322864LOC100360083ribosomal protein L5-like1639304503932493Rat
2320746Zfp869zinc finger protein 869161968988119701201Rat
2320904LOC100361056transmembrane protein 60-like161918331819184586Rat
2321691Lrtm1leucine-rich repeats and transmembrane domains 11642103434217843Rat
2323172LOC100363371hypothetical LOC100363371161601072116018027Rat
2323222LOC100363321serologically defined colon cancer antigen 3161601813716020197Rat
2322724LOC100360125ribosomal protein S7-like1650748725090357Rat
2321939Hsh2dhematopoietic SH2 domain containing161763051917649932Rat
2321209Nwd1NACHT and WD repeat domain containing 1161716647917242055Rat
2324264Trim60tripartite motif containing 60162472277024724188Rat
2324350LOC100362608peroxisomal 3,2-trans-enoyl-CoA isomerase-like161333893013340889Rat
2325402Mir346microRNA 346161021811810218215Rat
2324745Stab1stabilin 11663304356360934Rat
2324846LOC100363043chromosome 14 open reading frame 119-like161293634512936885Rat
6488495LOC100912224protein SET-like161234554712346636Rat
6493549LOC100911353uncharacterized LOC100911353162008311920178026Rat
6492821Ndufa13NADH:ubiquinone oxidoreductase subunit A13161952663319533567Rat
6491640LOC100911649ral guanine nucleotide dissociation stimulator-like161143305611438066Rat
6491687LOC100911661uncharacterized LOC1009116611616275741636979Rat
6502340LOC100909673protein FAM173B-like1627450872745803Rat
6500283LOC100910026uncharacterized LOC1009100261693000309332329Rat
6498266LOC100910468tripartite motif-containing protein 60-like162471300824714402Rat
6498547Smim31small integral membrane protein 31162460413124641053Rat
6501477LOC100909897uncharacterized LOC100909897161405779414059580Rat
7489016Mir3075microRNA 30751611010631101175Rat
7515318LOC102553299uncharacterized LOC1025532991613332711337137Rat
7525846LOC102551656uncharacterized LOC10255165616211143225944Rat
7507794LOC102547142uncharacterized LOC1025471421679385357973540Rat
7532294LOC10254978439S ribosomal protein L37, mitochondrial-like1669449646948306Rat
7533746LOC102557070MLV-related proviral Env polyprotein-like162245256522465004Rat
7612972LOC102548312uncharacterized LOC102548312161705910817066763Rat
7613786LOC102555898uncharacterized LOC102555898161379868113850813Rat
7636032LOC102553896MLV-related proviral Env polyprotein-like1627187812727590Rat
7638512LOC102552223uncharacterized LOC102552223161991816219987122Rat
7654081LOC102553110ral guanine nucleotide dissociation stimulator-like161120335511209558Rat
7595518LOC102551750uncharacterized LOC102551750162146226721471760Rat
7610272LOC102546921uncharacterized LOC102546921161643414616489469Rat
7591200LOC102552466uncharacterized LOC102552466161140903611427387Rat
7556606LOC102548056uncharacterized LOC1025480561622997082301948Rat
7557665LOC102552063BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like162344414023444821Rat
7600751LOC102548917zinc finger protein 844-like161785686017887122Rat
7561800LOC102554171uncharacterized LOC102554171162060307820617507Rat
7549926IqcnIQ motif containing N161871651918733971Rat
7583975LOC102549994uncharacterized LOC102549994161900109519005079Rat
7607439LOC102555502uncharacterized LOC1025555021657082485710535Rat
7673432LOC102546465uncharacterized LOC102546465161564964215659610Rat
7684901LOC102551257zinc finger protein 709-like161981138319856479Rat
7708283LOC102555619uncharacterized LOC1025556191660187496021873Rat
7724613LOC102552347uncharacterized LOC10255234716754086761766Rat
7713473LOC102550037uncharacterized LOC1025500371670923627092787Rat
7668173LOC102553494aconitate hydratase, mitochondrial-like1628999132910508Rat
7743208LOC102550503uncharacterized LOC1025505031675525377560461Rat
7720136LOC102556133uncharacterized LOC102556133161565976115746831Rat
7674954LOC102551632ral guanine nucleotide dissociation stimulator-like161129398311321792Rat
7728571LOC102548752uncharacterized LOC102548752161783616317850647Rat
7728594LOC102547798protein phosphatase 1 regulatory subunit 26-like1620209972025203Rat
9134190LOC103693956uncharacterized LOC1036939561650161615028732Rat
9212565LOC103693926uncharacterized LOC103693926162539810925441053Rat
9177833LOC103693912uncharacterized LOC103693912161637194316377347Rat
9185666LOC103693859uncharacterized LOC10369385916788500945373Rat
9247050LOC103693862U6 snRNA-associated Sm-like protein LSm5 pseudogene1613397691340198Rat
9252289LOC103693914uncharacterized LOC103693914161736573317379714Rat
9299863Apelaapelin receptor early endogenous ligand162469423124703466Rat
9302900LOC103693877PRAME family member 12 pseudogene1629521052958891Rat
9461660LOC103693918uncharacterized LOC103693918162024551820297490Rat
9317194LOC103693891uncharacterized LOC1036938911642265054242947Rat
9394835LOC103691104uncharacterized LOC103691104162004864820078643Rat
9442066LOC103693876uncharacterized LOC1036938761636820023692605Rat
9442087LOC10369392360S ribosomal protein L22-like 1 pseudogene162336959723370002Rat
11356238LOC108348385uncharacterized LOC108348385161770609717745251Rat
11448898LOC108353113ubiquitin-conjugating enzyme E2 variant 2 pseudogene161701254117021287Rat
11448581LOC108353077ral guanine nucleotide dissociation stimulator-like161112151311128582Rat
11466116LOC108348435uncharacterized LOC1083484351691389829150141Rat
11474719LOC10835309060S ribosomal protein L34 pseudogene1657003215707311Rat
11475248LOC108348437glyceraldehyde-3-phosphate dehydrogenase pseudogene161823240518233393Rat
11357136LOC108348454uncharacterized LOC1083484541652836235291153Rat
11447442LOC108348389uncharacterized LOC108348389161840993518414157Rat
11448061LOC10835308860S ribosomal protein L27 pseudogene1612403581242676Rat
11429468LOC108348302zinc finger protein 709-like161964358719654567Rat
11440895LOC108348393uncharacterized LOC108348393162551180525586188Rat
11416049LOC108348384uncharacterized LOC108348384161728229417295441Rat
11419074LOC108348388uncharacterized LOC108348388161842343918431924Rat
11422894LOC108348452uncharacterized LOC1083484521628837082938011Rat
11425421LOC108353065uncharacterized LOC10835306516831750841045Rat
11373735Ccdc194coiled-coil domain containing 194161820509918209310Rat
11409211LOC108353080uncharacterized LOC108353080161151437011547017Rat
11399163LOC108348453calsequestrin-1-like1655450345593179Rat
11399720LOC108353075uncharacterized LOC1083530751697544319756843Rat
11389891LOC108353092uncharacterized LOC108353092161138173211387931Rat
11519960LOC108348379uncharacterized LOC108348379161167399911678168Rat
11478084LOC108348374uncharacterized LOC1083483741657542015758706Rat
11502729LOC108353078ral guanine nucleotide dissociation stimulator-like161137143711377948Rat
11496471LOC108348383uncharacterized LOC108348383161535295215364193Rat
11497444LOC108353079uncharacterized LOC108353079161108052511325666Rat
11482878LOC108348392high mobility group protein B1 pseudogene162558097225585046Rat
11493406LOC108353073uncharacterized LOC1083530731672667267267706Rat
11493527LOC108353094cytochrome c, somatic pseudogene161287857612878932Rat
41321860LOC120097535uncharacterized LOC120097535162253420122547804Rat
41138077LOC120097423elongin-A3 member D-like161365110613652871Rat
41234305LOC120097457elongin-A3 member D-like161363570013637465Rat
41281915LOC120097582small nucleolar RNA MBII-202162268928122689366Rat
41380747LOC120097470uncharacterized LOC120097470161300744613016645Rat
41088228LOC12009753060S ribosomal protein L6-like161370095213711446Rat
41169148LOC120097580small nucleolar RNA SNORA16B/SNORA16A family161975912219759293Rat
41324383LOC120097437uncharacterized LOC120097437161722994717231890Rat
41088786LOC120097483uncharacterized LOC120097483161139198711510903Rat
41114395LOC120097656U6 spliceosomal RNA162406722224067324Rat
41170814LOC120097616small nucleolar RNA SNORA17161315877913158909Rat
41205510NEWGENE_40934091transfer RNA alanine (anticodon AGC)1663896186389690Rat
41279033LOC120097489uncharacterized LOC1200974891667244666745900Rat
41280002LOC120097650U6 spliceosomal RNA162490367824903783Rat
41117791LOC120097533elongin-A2-like161409024114092062Rat
41173772LOC120097513uncharacterized LOC1200975131622259872228141Rat
41208562LOC120097646U6 spliceosomal RNA161918492119185027Rat
41388827LOC120097370uncharacterized LOC120097370161952673319530918Rat
41119181LOC120097612small nucleolar RNA SNORA17162581634625816463Rat
41120676LOC120097379uncharacterized LOC120097379161869372318696384Rat
41187174LOC120097654U6 spliceosomal RNA162340331023403429Rat
41262859LOC120097634U4 spliceosomal RNA162538368325383821Rat
41096323LOC120097507uncharacterized LOC120097507169975701025164Rat
41366414LOC12009743860S ribosomal protein L34-like1617373521765838Rat
41392720LOC120097384uncharacterized LOC120097384162059741720609754Rat
41123311LOC120097586small nucleolar RNA SNORA15161265044412650570Rat
41154593LOC120097603small nucleolar RNA SNORA171684682298468351Rat
41192096LOC120097665small nucleolar RNA SNORA711617519181752049Rat
41344393LOC120097429uncharacterized LOC120097429161754427317546652Rat
41394525LOC120097531elongin-A3-like161406298014068724Rat
41215662LOC120097394uncharacterized LOC1200973941670879187105752Rat
41344701LOC120097449uncharacterized LOC1200974491673471377356399Rat
41345083LOC120097670small nucleolar RNA SNORA741674241367424330Rat
41345558LOC120097445SIN3-HDAC complex-associated factor-like161595514915957579Rat
41369911LOC120097588small nucleolar RNA SNORA321658571735857312Rat
41182876LOC120097481ral guanine nucleotide dissociation stimulator-like161136139411366549Rat
41183091LOC120097440elongin-A3 member D-like161365623113657995Rat
41269694LOC120097368uncharacterized LOC120097368161882391418826522Rat
41289686LOC120097594small nucleolar RNA SNORA481649269784927114Rat
41070138LOC12009752360S ribosomal protein L10-like162094081420943055Rat
41070428LOC120097675small nucleolar RNA SNORD113/SNORD114 family1659980805998158Rat
41102896LOC120097475elongin-C-like162000322920003906Rat
41160059LOC120097375uncharacterized LOC120097375161830225118303041Rat
41160293LOC120097406uncharacterized LOC120097406162158081921586456Rat
41160719LOC120097456elongin-A3 member D-like161364083613642601Rat
41160895LOC120097632small nucleolar RNA SNORD19B1662097526209831Rat
41184000LOC120097388uncharacterized LOC1200973881634740803491547Rat
41219039LOC120097599small nucleolar RNA SNORA17162279917522799306Rat
41220168LOC120097436HAUS augmin-like complex subunit 8161710413417112475Rat
41373121LOC120093089putative protein TPRXL161871170218716003Rat
41128131LOC120097432ZW10 interactor-like1695838319590123Rat
41229631LOC120097596U1 spliceosomal RNA161589107415891234Rat
41271104LOC120097497cactin-like161848816918491349Rat
41349639NEWGENE_40934091transfer RNA alanine (anticodon AGC)161011318910113261Rat
41350617LOC120097671small nucleolar RNA SNORA70162665164726651780Rat
41197998LOC120097479non-POU domain-containing octamer-binding protein-like161165663611664218Rat
41351762LOC120097618small nucleolar RNA SNORA17161298391312984032Rat
41232538LOC120097522putative protein T-ENOL1697456519747040Rat
41133681LOC120097506translation initiation factor IF-2-like1611699591173991Rat
41234213LOC120097581small nucleolar RNA SNORA68161854407118544199Rat
40947784LOC120097636U4 spliceosomal RNA161964824719648409Rat
40973030NEWGENE_40934091transfer RNA alanine (anticodon AGC)161698496416985044Rat
40948029LOC120097585small nucleolar RNA SNORA151696094459609571Rat
40952345LOC120097615small nucleolar RNA SNORA17161233856812338687Rat
40952874LOC120097476uncharacterized LOC120097476162010987920128723Rat
41012872LOC120097563elongin-A2-like161407979814081667Rat
40956320LOC120097628small nucleolar RNA SNORD691662089226209001Rat
40999228LOC120097480non-POU domain-containing octamer-binding protein-like161143979411443972Rat
40929646LOC120097499host cell factor C1 regulator 1-like1621248742125157Rat
40981894LOC12009752160S ribosomal protein L7-like1643486614349495Rat
41000842LOC120097386uncharacterized LOC1200973861654102325417781Rat
41001347LOC120097627small nucleolar RNA SNORD191662108386210914Rat
40931794LOC120097604small nucleolar RNA SNORA171694187869418914Rat
40959642LOC120097490uncharacterized LOC1200974901612500411253697Rat
40960270LOC120097450uncharacterized LOC120097450161729634717299456Rat
40960479LOC120093126ral guanine nucleotide dissociation stimulator-like161144434811489474Rat
40961170LOC120097431uncharacterized LOC12009743116586818592862Rat
40985629LOC120097592small nucleolar RNA SNORA481671642757164418Rat
41007829LOC120097524farnesyl pyrophosphate synthase-like1658905645901971Rat
40937621LOC120097514uncharacterized LOC120097514162094725620969103Rat
40937714LOC120097526uncharacterized LOC1200975261673932057395586Rat
40963402LOC120097605small nucleolar RNA SNORA17162241018722410318Rat
40988168LOC120097601small nucleolar RNA SNORA17162169246421692591Rat
40988172LOC120097549elongin-A2-like161408505414086905Rat
41008728NEWGENE_40934091transfer RNA alanine (anticodon AGC)161823080518230879Rat
41008933LOC120097391uncharacterized LOC120097391161580844315890086Rat
40993192LOC120097387cyclin-dependent kinases regulatory subunit 2-like1634066233406864Rat
40993958LOC120097392uncharacterized LOC12009739216949194961139Rat
40995696LOC120097415uncharacterized LOC120097415162088125020897122Rat
41048147LOC120097393uncharacterized LOC12009739316677492712886Rat
41311446LOC120097510spindlin-1-like16217000218039Rat
41311753LOC120097455uncharacterized LOC120097455162130728321320866Rat
41048724LOC120097366elongin-A2-like161409549214097251Rat
41048869LOC120097376uncharacterized LOC120097376161830186218306472Rat
41075555LOC120097645U6 spliceosomal RNA162429845524298561Rat
41244298LOC120097444uncharacterized LOC1200974441616203291626184Rat
41077788LOC120097674small nucleolar RNA SNORA70162079013720790270Rat
41077808LOC120097511uncharacterized LOC12009751116225745300299Rat
41248309LOC120097418uncharacterized LOC120097418162342454223432131Rat
41053117LOC120097471uncharacterized LOC120097471162502154425028828Rat
41134806LOC120097443uncharacterized LOC12009744316615428620873Rat
41053970LOC120097658U6 spliceosomal RNA161633148816331594Rat
41143229LOC120093076elongin-A3 member D-like161363056913632334Rat
41152257LOC120097624small nucleolar RNA SNORA17161929880619298940Rat
41335549LOC120097467uncharacterized LOC120097467161532003715351518Rat
41317526NEWGENE_40933816transfer RNA valine (anticodon AAC)1673108207310892Rat
41032549LOC120097369uncharacterized LOC120097369161906795819076416Rat
41058384NEWGENE_40926764transfer RNA proline (anticodon AGG)1677193637719443Rat
41224408LOC120097651U6 spliceosomal RNA161251047812510584Rat
41301818LOC120097595small nucleolar RNA SNORA481665420676542204Rat
41334314LOC120097668U7 small nuclear RNA162316628223166342Rat
41037850LOC120097424uncharacterized LOC1200974241694534069464250Rat
41066039LOC120097559uncharacterized LOC120097559162564078125648114Rat
41040544LOC120097482ral guanine nucleotide dissociation stimulator-like161126906111277700Rat
41238505LOC120097453elongin-A3 member D-like161364596713647732Rat
41067760NEWGENE_41052310transfer RNA valine (anticodon CAC)161313437313134453Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10660D16Mgh32241696389139639137Ratregion
10829D16Got22296161873663118736930Ratregion
10885D16Wox9145161703387617034023Ratregion
33848D16Mit21691642276094227730Ratregion
34142D16Mgh9247162489156524891815Ratregion
34654D6Mit11244161703386917034109Ratregion
34689D16Mgh71431657694075769550Ratregion
11286D16Mgh2149161700757617007744Ratregion
11446D16Mgh4150161769679117696911Ratregion
11447D16Wox10113161769677717696890Ratregion
11448D16Wox11192161769678517696947Ratregion
33636D16Mit1164162416342224163586Ratregion
37320D16Rat311991680829068083107Ratregion
37550D16Rat26202162198271521982923Ratregion
35214D16Rat10137161859986618600001Ratregion
35527D16Rat7164161900443519004606Ratregion
36892D16Rat1212416380245380356Ratregion
37058D16Rat111881687505488750747Ratregion
37854D16Rat30177161603965916039848Ratregion
36484D16Rat9160162087224320872425Ratregion
34797D16Rat8156162081798420818140Ratregion
34833D13Rat19169161144291211443111Ratregion
35005D16Rat6130162103489521035003Ratregion
35763D16Rat5126162218033522180465Ratregion
35831D16Rat221781634536603453842Ratregion
39714D16Rat74155162238106322381216Ratregion
38370D16Rat44205161572624415726433Ratregion
40382D16Rat81153161540773015407877Ratregion
40498D16Rat1071331675223397522468Ratregion
40614D16Rat1111411696107239610876Ratregion
40634D16Rat832231686275678627782Ratregion
40724D16Rat872071633801503380363Ratregion
38438D16Rat47231162059159120591821Ratregion
38594D16Rat52213162462910324629302Ratregion
38784D16Rat512421633913053391527Ratregion
40052D16Rat75141162247748222477621Ratregion
40060D16Rat861551648248364824985Ratregion
38834D16Rat35281161588423915884486Ratregion
38858D16Rat54245161089057910890802Ratregion
39200D16Rat32125161091889410919027Ratregion
39272D16Rat382291683361478336378Ratregion
39272D16Rat382291683361478336281Ratregion
39456D16Rat8814816832236832380Ratregion
39586D16Rat76146162136141421361552Ratregion
42020D16Arb44201657692785769666Ratregion
42022D16Arb5295161703378317034077Ratregion
42024D16Arb6188162502933025029518Ratregion
42026D16Arb7180162502520725025382Ratregion
42030D16Arb9210161769003917690257Ratregion
42810D6Rat183143161753527617535412Ratregion
41412D16Rat85156161208384212083987Ratregion
43064D16Rat1232391681004118100635Ratregion
43065D16Rat122214161292757112927779Ratregion
43067D16Rat105174161942327619423446Ratregion
43068D16Rat120245162110510721105338Ratregion
42409D16Rat11224616110590110831Ratregion
40868D16Rat78132161918215819182264Ratregion
40906D16Rat73125162208806822088199Ratregion
41062D16Rat77181162056833520568727Ratregion
41062D16Rat77181162056833520568510Ratregion
41618D16Rat82172161839233818392522Ratregion
43099D17Rat171116161271130512711501Ratregion
44552D9Wox21136162266135222661409Ratregion
60767D16Wox12131162644861526448740Ratregion
60123D16Got14201161086441610864617Ratregion
60124D16Got17256161814301318143270Ratregion
60126D16Got517216197699197871Ratregion
60132D16Got9721693408079340879Ratregion
45307D16Got12271671962037196434Ratregion
45308D16Got217616197415197591Ratregion
45309D16Got32691634470633447332Ratregion
45310D16Got42971658660715866368Ratregion
45311D16Got61231615774861577609Ratregion
45312D16Rat1241451666044876604614Ratregion
45313D16Got911761667717416771917Ratregion
45315D16Got71831675860107586195Ratregion
45316D16Got81651679980777998243Ratregion
45317D16Got951321687787138778842Ratregion
45318D16Got10393161279037012790760Ratregion
45320D16Got13186161149085511491041Ratregion
45321D16Got16223161376057713760799Ratregion
45322D16Got15131161480922614809357Ratregion
45323D16Got1296161241872812418824Ratregion
45325D16Got19175161765314217653317Ratregion
45327D16Got18216161924820219248422Ratregion
45328D16Got20171161765313317653304Ratregion
45330D16Got24254162099316120993415Ratregion
45331D16Got23228162120433021204558Ratregion
45332D16Got25155162163164321631798Ratregion
45333D16Got26176162368820023688376Ratregion
45335D16Got96169162594760525947774Ratregion
60015D12Got381721673968087396980Ratregion
66387D16Mco34001639278273928280Ratregion
66394D16Mco92041696389219639125Ratregion
629609D16Kyo1151161899719718997413Ratregion
66539D16Uia5228162441724424417476Ratregion
67249D16Arb10106161769678017696886Ratregion
67250D16Arb112021696391899639391Ratregion
1357995D16Chm682451620282402028487Ratregion
1357996D16Chm651841628444362844620Ratregion
1357997D16Chm5221016525912526122Ratregion
1357999D16Chm1419316127141127338Ratregion
1358001D16Chm712491622443982244647Ratregion
1358002D16Chm732231620736352073858Ratregion
1358003D16Chm611901633097213309913Ratregion
1358004D16Chm492131634367143436931Ratregion
1358005D16Chm272071624474262447633Ratregion
1358006D16Chm161811625525122552695Ratregion
1358007D16Chm781581626284782628636Ratregion
1358009D16Chm2620116630050630247Ratregion
1358010D16Chm432001625267832526987Ratregion
1358011D16Chm3221716132366132583Ratregion
1358012D16Chm3418916125494125683Ratregion
1358015D16Chm672401622079092208149Ratregion
1358017D16Chm642501628030512803301Ratregion
1358022D16Chm3120516305507305714Ratregion
1358023D16Chm581991675389127539111Ratregion
1358024D16Chm3319816187648187846Ratregion
1358025D16Chm772411626038292604070Ratregion
1358026D16Chm742171617377951738012Ratregion
1358027D16Chm2520616538187538394Ratregion
1358029D16Chm5519516830462830657Ratregion
1358029D16Chm5519516829968830657Ratregion
1358032D16Chm692371619941331994341Ratregion
1358033D16Chm2419316127141127338Ratregion
1358034D16Chm632381628514712851709Ratregion
1358035D16Chm471981622368462237044Ratregion
1358036D16Chm23190168852488716Ratregion
1358037D16Chm622916244020244249Ratregion
1358040D16Chm3621616903314903530Ratregion
1358041D16Chm602611630804163080679Ratregion
1358042D16Chm662381629952252995463Ratregion
1358043D16Chm292721619303571930629Ratregion
1358044D16Chm22081626821802682388Ratregion
1358045D16Chm5420116503575503776Ratregion
1358046D16Chm762481625830082583254Ratregion
1358047D16Chm412651624696432469907Ratregion
1358048D16Chm3720116578688578891Ratregion
1358051D16Chm720816756765756975Ratregion
1358053D16Chm462001618664811866681Ratregion
1631551D16Got1202791630199703020251Ratregion
1628013D16Got1141391653727645372903Ratregion
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5084334AI169383128161866457618664704Ratregion
5082129BF409820160162325676223256922Ratregion
5088147Wnt5a2211637135683713789Ratregion
5085477BM391146193161150127811501471Ratregion
5080912RH141855191161913330719133498Ratregion
5085145BE096312219161837021218370431Ratregion
5085242AA799642126161288822012888346Ratregion
5090489AU049780134161055344910553583Ratregion
5088821AU0487911401671282907128430Ratregion
5090209AU049615153162213120122131354Ratregion
5088967AU0488752071644741404474347Ratregion
5082533BF416213114161835902518359139Ratregion
5085986AW529382168162514287125143039Ratregion
5086028AA8591561951612321471232342Ratregion
5084702AI17913396161002390810024004Ratregion
5082901BF390373157161016925810169415Ratregion
5081078RH141952187161859741718597604Ratregion
5084846AI2359011121618845651884677Ratregion
5084934AA8002851011616579821658083Ratregion
5085016AI179879186161912976819130421Ratregion
5085034AI23760791161801538318015474Ratregion
5083203BI2753041661624415252441691Ratregion
5083203BI2753041661624415252441691Ratregion
5086606BQ190966192162132296621323158Ratregion
5085597AW5281802261635306603530886Ratregion
5085653BI2767121531656990495699202Ratregion
5086693AA8918351891662067546206943Ratregion
5086713BE1072941791665834626583641Ratregion
5086799BM387488179161806119018061369Ratregion
5081921BE1187561591661851286185287Ratregion
5084010AI0109831941674159287416122Ratregion
5502597RH125499230161854370518544026Ratregion
5502794LSM4137161875616118756298Ratregion
5503128MAT1A0161699880216999578Ratregion
5507592Atp6b1121162062707220627703Ratregion
5503408TM466161769048217690548Ratregion
5503346Hesx101621922252193143Ratregion
5503964UniSTS:256984368162303917223039540Ratregion
5504159UniSTS:2593750161802877418029392Ratregion
5504161UniSTS:2593780161802761918028436Ratregion
5504153Rent10161908491019085883Ratregion
5505081Sftpd348161705132317051671Ratregion
5505400Jund0161873438218735350Ratregion
5505953UniSTS:496654112161880519618805308Ratregion
5506078UniSTS:4983030161884032418840607Ratregion
5506763G4522318316454227454410Ratregion
5506743G44990250161793781417938066Ratregion
5507055UniSTS:2242761901657694215769611Ratregion
5507213UniSTS:225314189161758717117587360Ratregion
5500141UniSTS:2371612951686397288640023Ratregion
5499627MARC_4117-4118:991938388:1111161854374818543950Ratregion
5500669RH1365902221697373739737595Ratregion
5501093PMC134025P2493161959832019598813Ratregion
5500412GDB:5550190161345540413455633Ratregion
5500456AA55556448161891943818919486Ratregion
5499977UniSTS:235923371161817948418179855Ratregion
5499981UniSTS:235912305161977625319776558Ratregion
5500145UniSTS:2371502051669214246921629Ratregion
5500147UniSTS:2371641101697355159735625Ratregion
5503126LDB3881699086859909246Ratregion
5500394GDB:4340120161769082917690976Ratregion
5503865D14S105E84161854429218544468Ratregion
5501359RH69933505161870267018703175Ratregion
5501089PMC134025P1311161959832019598631Ratregion
5501095PMC134025P3250161959856319598813Ratregion
5501522D2S3397621642552794256041Ratregion
5506577Wnt5a2341637030223704443Ratregion
5506595SH3BP5961665881636588259Ratregion
5501804MARC_13424-13425:1002294866:11021686476908648300Ratregion
5501892MARC_17013-17014:1023291181:101617182811718704Ratregion
5502772TKT1261657449175745156Ratregion
5502307RH124339154162000356120003715Ratregion
5502651RH126344196161891605518916251Ratregion
5502487RH125067120161815296818153088Ratregion
Position Markers

Peak: (D16Mit2)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2164,227,609 - 4,227,730 (+)MAPPER
Rnor_6.0165,098,584 - 5,098,704NCBI
Rnor_6.0165,013,802 - 5,013,922NCBI
Rnor_5.0164,954,192 - 4,954,312UniSTS
Rnor_5.0165,038,686 - 5,038,806UniSTS
RGSC_v3.4164,304,396 - 4,304,517RGD
RGSC_v3.4164,304,397 - 4,304,517UniSTS
RGSC_v3.1164,304,394 - 4,304,515RGD
Celera1610,945,533 - 10,945,653UniSTS
RH 3.4 Map168.3RGD
RH 3.4 Map168.3UniSTS
SHRSP x BN Map161.1599UniSTS
SHRSP x BN Map161.1599RGD
FHH x ACI Map163.1999RGD
Cytogenetic Map16p16UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631524Bp75Blood pressure QTL 750.05arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)161110831Rat
2325838Bp347Blood pressure QTL 3470.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1613080679Rat
1357403Slep4Serum leptin concentration QTL 43.91blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)1619639137Rat
1600369Hcas8Hepatocarcinoma susceptibility QTL 8liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)16122477621Rat
631830Alc7Alcohol consumption QTL 72.9consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16126727669Rat
634355Rends4Renal damage susceptibility QTL 40.05kidney blood vessel morphology trait (VT:0000530)organ lesion measurement (CMO:0000677)16126727669Rat
1582235Insul8Insulin level QTL 83.30.0063blood insulin amount (VT:0001560)calculated serum insulin level (CMO:0000359)16126727669Rat
9590151Scort8Serum corticosterone level QTL 88.450.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)16130836262Rat
2302380Slep6Serum leptin concentration QTL 63.36blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)16132139025Rat
2307172Activ4Activity QTL 43.710.00023locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)16133418960Rat
1354584Despr6Despair related QTL 63.10.0067locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16139533930Rat
2303566Bw90Body weight QTL 902body mass (VT:0001259)body weight (CMO:0000012)16139533930Rat
631561Hcuc2Hepatic copper content QTL 22.8hepatic copper amount (VT:0003065)liver total copper weight (CMO:0001507)16139533949Rat
6903319Bw114Body weight QTL 1142.70.0037body mass (VT:0001259)body weight (CMO:0000012)16143534949Rat
7411664Foco30Food consumption QTL 30110.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)16144588133Rat
1354625Despr7Despair related QTL 73.160.016locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16144977551Rat
1549842Bp248Blood pressure QTL 2480.01arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)163802452995463Rat
1600378Arunc4Aerobic running capacity QTL 40.03exercise endurance trait (VT:0002332)maximum distance run on treadmill (CMO:0001406)1638024580345693Rat
2293343Glom16Glomerulus QTL 167.4kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)1683223646053497Rat
2312660Bw95Body weight QTL 950.05inguinal fat pad mass (VT:0010424)inguinal fat pad weight to body weight ratio (CMO:0001253)1683223659492508Rat
2312663Slep9Serum leptin concentration QTL 90.001blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)1683223659492508Rat
2312666Insul16Insulin level QTL 160.01blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1683223659492508Rat
2312669Stl23Serum triglyceride level QTL 230.01blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)1683223659492508Rat
12903278Am16Aortic mass QTL 160.019aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)168323802995225Rat
12903279Cm115Cardiac mass QTL 1150.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)168323802995225Rat
12903281Cm116Cardiac mass QTL 1160.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)168323802995225Rat
12903952Cm117Cardiac mass QTL 1170.001heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)168323802995225Rat
12903954Bw186Body weight QTL 1860.011body mass (VT:0001259)body weight (CMO:0000012)168323802995225Rat
2301404Bp321Blood pressure QTL 3210.05arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)168323802995225Rat
12903955Kidm69Kidney mass QTL 690.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)168323804227609Rat
2301406Kidm39Kidney mass QTL 390.002kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)16285170915884239Rat
1300133Rf24Renal function QTL 243.64blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)16338015021361552Rat
2306902Bp339Blood pressure QTL 3390.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16338015043025077Rat
737825Alc13Alcohol consumption QTL 134.5consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16422760916039848Rat
70183BpQTLcluster13Blood pressure QTL cluster 133.654arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)16422760943025077Rat
70183BpQTLcluster13Blood pressure QTL cluster 133.654arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16422760943025077Rat
70183BpQTLcluster13Blood pressure QTL cluster 133.654arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)16422760943025077Rat
737819Hcas4Hepatocarcinoma susceptibility QTL 44.43liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)16422760946975965Rat
61405Niddm6Non-insulin dependent diabetes mellitus QTL 63.660.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)16422760948972724Rat
61338Bp23Blood pressure QTL 234.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16422760949227609Rat
737826Alc11Alcohol consumption QTL 113.2consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16422760960252231Rat
61372Bp40Blood pressure QTL 402.2blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)16422773017696785Rat
631517Scl9Serum cholesterol level QTL 93.3blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)161572643321034895Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor depth of invasion (CMO:0001888)161769679182635055Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor depth of invasion (CMO:0001888)161769679182635055Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor diameter (CMO:0001889)161769679182635055Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor diameter (CMO:0001889)161769679182635055Rat
70215Niddm29Non-insulin dependent diabetes mellitus QTL 293.54blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)161900443575226532Rat
2302057Pia29Pristane induced arthritis QTL 293.60.001blood autoantibody amount (VT:0003725)serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)162173597566735975Rat
8694453Bw172Body weight QTL 1728.330.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)162432551369325513Rat
6903294Stl30Serum triglyceride level QTL 302.60.0013blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)162515279370152793Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Alc7


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2006-04-14 Alc7  Alcohol consumption QTL 7    Alcohol preference QTL 7  Name updated 1299863 APPROVED

RGD Curation Notes
Note Type Note Reference
qtl_cross_type Intercross  
qtl_general crossing of replicate lines HAD2 x LAD2 did not confirm the existence of QTL in this region 724636