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Gene: Hoxa13 (homeo box A13) Rattus norvegicus
Symbol: Hoxa13
Name: homeo box A13
Description: ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN embryonic hindgut morphogenesis; prostate gland development; response to testosterone; ASSOCIATED WITH Anorectal Malformations; hypospadias; Congenital Hand Deformities (ortholog); FOUND IN cytosol (ortholog); intermediate filament cytoskeleton (ortholog); nucleoplasm (ortholog); INTERACTS WITH 3,7-dihydropurine-6-thione; bisphenol A; dibutyl phthalate
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: homeobox A13; homeobox protein Hox-A13-like; LOC100910298; LOC500129; RGD1562483; similar to transcription factor HOXA13
Homo sapiens (human) : HOXA13 (homeobox A13)  HGNC  Alliance
Mus musculus (house mouse) : Hoxa13 (homeobox A13)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hoxa13 (homeobox A13)
Pan paniscus (bonobo/pygmy chimpanzee) : HOXA13 (homeobox A13)
Canis lupus familiaris (dog) : HOXA13 (homeobox A13)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hoxa13 (homeobox A13)
Sus scrofa (pig) : HOXA13 (homeobox A13)
Chlorocebus sabaeus (African green monkey) : HOXA13 (homeobox A13)
Heterocephalus glaber (naked mole-rat) : Hoxa13 (homeobox A13)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.0 Ensembl482,228,017 - 82,229,397 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04146,980,144 - 146,982,279 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4480,558,841 - 80,561,053NCBIRGSC3.4rn4RGSC3.4
Celera476,249,534 - 76,251,232 (-)NCBICelera
Cytogenetic Map4q24NCBI

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Additional Information

External Database Links
Nomenclature History
More on Hoxa13
Alliance Gene
Ensembl Gene
JBrowse: rn5
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1562483
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.