Gene: Nkx2-5 (NK2 homeobox 5) Rattus norvegicus
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Symbol: Nkx2-5
Name: NK2 homeobox 5
Description: ENCODES a protein that exhibits DNA-binding transcription factor activity; histone deacetylase binding; protein homodimerization activity; INVOLVED IN cardiac muscle cell differentiation; cellular response to growth factor stimulus; cellular response to hydrogen peroxide; ASSOCIATED WITH pulmonary fibrosis; aortic valve disease 2 (ortholog); atrial fibrillation (ortholog); FOUND IN nucleus; cytoplasm (ortholog); protein-containing complex (ortholog); INTERACTS WITH acrylamide; ammonium chloride; bisphenol A
AGR Description: Exhibits several functions, including DNA-binding transcription factor activity, histone deacetylase binding activity, and protein homodimerization activity; involved in several processes, including cardiac muscle cell differentiation, cellular response to growth factor stimulus, and cellular response to hydrogen peroxide; localizes to the nucleus; biomarker of pulmonary fibrosis; orthologous to human NKX2-5 (NK2 homeobox 5).
Merged Description: Exhibits several functions, including DNA-binding transcription factor activity, histone deacetylase binding activity, and protein homodimerization activity; involved in several processes, including cardiac muscle cell differentiation, cellular response to growth factor stimulus, and cellular response to hydrogen peroxide; localizes to the nucleus; biomarker of pulmonary fibrosis; orthologous to human NKX2-5 (NK2 homeobox 5); INTERACTS WITH acrylamide; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Csx; homeobox protein NK-2 homolog E; homeobox protein Nkx-2.5; NK2 transcription factor related, locus 5; NK2 transcription factor related, locus 5 (Drosophila); Nkx2.5; rNKx-2.5
Orthologs:
Homo sapiens (human) : NKX2-5 (NK2 homeobox 5)  HGNC  Alliance
Mus musculus (house mouse) : Nkx2-5 (NK2 homeobox 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Nkx2-5 (NK2 homeobox 5)
Pan paniscus (bonobo/pygmy chimpanzee) : NKX2-5 (NK2 homeobox 5)
Canis lupus familiaris (dog) : NKX2-5 (NK2 homeobox 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Nkx2-5 (NK2 homeobox 5)
Sus scrofa (pig) : NKX2-5 (NK2 homeobox 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01016,635,989 - 16,638,758 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01016,520,570 - 16,527,836 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41016,606,183 - 16,608,952 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11016,607,231 - 16,610,001 (+)NCBI
Celera1016,004,548 - 16,007,317 (+)NCBICelera
Cytogenetic Map10q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Nkx2-5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 620520
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.