Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Ift140 (intraflagellar transport 140) Rattus norvegicus
Symbol: Ift140
Name: intraflagellar transport 140
RGD ID: 2318759
Description: Predicted to be involved in several processes, including cilium organization; embryonic organ development; and nervous system development. Predicted to localize to several cellular components, including intraciliary transport particle A; microtubule organizing center; and photoreceptor cell cilium. Human ortholog(s) of this gene implicated in retinitis pigmentosa and short-rib thoracic dysplasia 9 with or without polydactyly. Orthologous to human IFT140 (intraflagellar transport 140); INTERACTS WITH (+)-schisandrin B; endosulfan; tetrachloromethane.
Type: protein-coding
RefSeq Status: MODEL
Also known as: intraflagellar transport protein 140 homolog; LOC100362124
Homo sapiens (human) : IFT140 (intraflagellar transport 140)  HGNC  Alliance
Mus musculus (house mouse) : Ift140 (intraflagellar transport 140)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ift140 (intraflagellar transport 140)
Pan paniscus (bonobo/pygmy chimpanzee) : IFT140 (intraflagellar transport 140)
Canis lupus familiaris (dog) : IFT140 (intraflagellar transport 140)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ift140 (intraflagellar transport 140)
Sus scrofa (pig) : IFT140 (intraflagellar transport 140)
Chlorocebus sabaeus (African green monkey) : IFT140 (intraflagellar transport 140)
Heterocephalus glaber (naked mole-rat) : Ift140 (intraflagellar transport 140)
more info ...
Allele / Splice: Ift140em1Kyo  
Genetic Models: W-Ift140em1Kyo
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.01014,373,668 - 14,461,509 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1014,373,679 - 14,461,160 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01014,189,328 - 14,276,940 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41014,258,556 - 14,348,468 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1013,711,169 - 13,793,096 (+)NCBICelera
Cytogenetic Map10q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Genetic Models
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
More on Ift140
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 2318759
Created: 2010-05-05
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.