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Gene: Vangl2 (VANGL planar cell polarity protein 2) Rattus norvegicus
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Symbol: Vangl2
Name: VANGL planar cell polarity protein 2
RGD ID: 1309442
Description: Predicted to be involved in several processes, including Wnt signaling pathway, planar cell polarity pathway; animal organ development; and plasma membrane bounded cell projection organization. Predicted to localize to several cellular components, including COPII-coated ER to Golgi transport vesicle; lateral plasma membrane; and stress fiber. Human ortholog(s) of this gene implicated in neural tube defect. Orthologous to human VANGL2 (VANGL planar cell polarity protein 2); PARTICIPATES IN Wnt signaling, the planar cell polarity pathway; Wnt signaling pathway; INTERACTS WITH 6-propyl-2-thiouracil; C60 fullerene; copper atom.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC289229; loop tail associated protein; Ltap; van Gogh-like protein 2; vang-like 2 (van gogh, Drosophila); vang-like protein 2
Orthologs:
Homo sapiens (human) : VANGL2 (VANGL planar cell polarity protein 2)  HGNC  Alliance
Mus musculus (house mouse) : Vangl2 (VANGL planar cell polarity 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Vangl2 (VANGL planar cell polarity protein 2)
Pan paniscus (bonobo/pygmy chimpanzee) : VANGL2 (VANGL planar cell polarity protein 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Vangl2 (VANGL planar cell polarity protein 2)
Sus scrofa (pig) : VANGL2 (VANGL planar cell polarity protein 2)
Chlorocebus sabaeus (African green monkey) : VANGL2 (VANGL planar cell polarity protein 2)
Heterocephalus glaber (naked mole-rat) : Vangl2 (VANGL planar cell polarity protein 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01390,379,203 - 90,405,627 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1390,380,632 - 90,405,591 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01394,902,313 - 94,928,719 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41387,964,426 - 87,988,364 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11388,152,106 - 88,178,412 (-)NCBI
Celera1384,077,622 - 84,101,482 (-)NCBICelera
Cytogenetic Map13q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Vangl2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1309442
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-10-06
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.