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Gene: Snx17 (sorting nexin 17) Rattus norvegicus
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Symbol: Snx17
Name: sorting nexin 17
Description: Predicted to have low-density lipoprotein particle receptor binding activity; phosphatidylinositol binding activity; and protein C-terminus binding activity. Predicted to be involved in several processes, including circulatory system development; endosomal transport; and receptor-mediated endocytosis. Predicted to localize to the cytoplasm and protein-containing complex. Orthologous to human SNX17 (sorting nexin 17); INTERACTS WITH (+)-schisandrin B; bisphenol A; dipentyl phthalate.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC298836; sorting nexin-17
Orthologs:
Homo sapiens (human) : SNX17 (sorting nexin 17)  HGNC  Alliance
Mus musculus (house mouse) : Snx17 (sorting nexin 17)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Snx17 (sorting nexin 17)
Pan paniscus (bonobo/pygmy chimpanzee) : SNX17 (sorting nexin 17)
Canis lupus familiaris (dog) : SNX17 (sorting nexin 17)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Snx17 (sorting nexin 17)
Sus scrofa (pig) : SNX17 (sorting nexin 17)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: suggests misassembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0626,541,137 - 26,546,650 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0636,359,400 - 36,364,050 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4625,153,586 - 25,159,556 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1625,156,539 - 25,162,509 (-)NCBI
Celera624,668,832 - 24,674,303 (-)NCBICelera
Cytogenetic Map6q14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Snx17
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1306424
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.