Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Kdm6a (lysine demethylase 6A) Rattus norvegicus
Analyze
Symbol: Kdm6a
Name: lysine demethylase 6A
Description: Predicted to have DNA binding activity; histone demethylase activity (H3-K27 specific); and identical protein binding activity. Predicted to be involved in several processes, including chordate embryonic development; chromatin organization; and embryonic morphogenesis. Predicted to localize to the MLL3/4 complex. Human ortholog(s) of this gene implicated in Kabuki syndrome; esophagus squamous cell carcinoma; and precursor lymphoblastic lymphoma/leukemia. Orthologous to human KDM6A (lysine demethylase 6A); INTERACTS WITH 2-acetamidofluorene; bisphenol A; oxaliplatin.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOW QUALITY PROTEIN: lysine-specific demethylase 6A; lysine (K)-specific demethylase 6A; lysine-specific demethylase 6A; NEWGENE_1565481
Orthologs:
Homo sapiens (human) : KDM6A (lysine demethylase 6A)  HGNC  Alliance
Mus musculus (house mouse) : Kdm6a (lysine (K)-specific demethylase 6A)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Kdm6a (lysine demethylase 6A)
Pan paniscus (bonobo/pygmy chimpanzee) : KDM6A (lysine demethylase 6A)
Canis lupus familiaris (dog) : KDM6A (lysine demethylase 6A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Kdm6a (lysine demethylase 6A)
Sus scrofa (pig) : KDM6A (lysine demethylase 6A)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X4,805,493 - 4,945,788 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX4,806,277 - 4,945,944 (-)Ensembl
CeleraX4,851,606 - 4,991,275 (-)NCBICelera
Cytogenetic MapXq11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Kdm6a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 9275041
Created: 2014-08-25
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.