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Gene: Nfatc1 (nuclear factor of activated T-cells 1) Rattus norvegicus
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Symbol: Nfatc1
Name: nuclear factor of activated T-cells 1
Description: Exhibits RNA polymerase II regulatory region sequence-specific DNA binding activity and RNA polymerase II transcription coactivator binding activity. Involved in positive regulation of transcription by RNA polymerase II. Localizes to the nucleus. Orthologous to human NFATC1 (nuclear factor of activated T cells 1); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2,2',4,4'-Tetrabromodiphenyl ether; ATP.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC100361818; nuclear factor of activated T-cells, cytoplasmic 1; nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1
Orthologs:
Homo sapiens (human) : NFATC1 (nuclear factor of activated T cells 1)  HGNC  Alliance
Mus musculus (house mouse) : Nfatc1 (nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Nfatc1 (nuclear factor of activated T cells 1)
Pan paniscus (bonobo/pygmy chimpanzee) : NFATC1 (nuclear factor of activated T cells 1)
Canis lupus familiaris (dog) : NFATC1 (nuclear factor of activated T cells 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Nfatc1 (nuclear factor of activated T cells 1)
Sus scrofa (pig) : NFATC1 (nuclear factor of activated T cells 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01877,203,517 - 77,322,690 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01876,309,900 - 76,426,095 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41877,498,654 - 77,581,231 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1872,704,426 - 72,813,069 (-)NCBICelera
Cytogenetic Map18q12.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Nfatc1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 2319357
Created: 2010-05-05
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.