Scort22 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Scort22 (Serum corticosterone level QTL 22) Rattus norvegicus

Symbol: Scort22
Name: Serum corticosterone level QTL 22
RGD ID: 9590318
Previously known as: GR-mediated negative feedback
Trait: blood corticosterone amount   (VT:0005345)    
Measurement Type: plasma corticosterone level   (CMO:0001173)    
LOD Score: 7.64
P Value: 0.001
Variance: 26.3
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21829,792,965 - 74,792,965RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01831,361,341 - 76,361,341RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01830,600,568 - 75,600,568RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41832,105,822 - 77,105,822RGD_MAPPER_PIPELINERGSC3.4
Cross Type: intercross
Strains Crossed: F344/IcoCrlf LOU/NimrOlaHsd 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
1. Marissal-Arvy N, etal., Horm Metab Res. 2014 Jul 8.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
3057Mc4rmelanocortin 4 receptor186041983260421719Rat
3058Mc5rmelanocortin 5 receptor186191518861920229Rat
3680St8sia3ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3185775434957760839Rat
62025Rps14ribosomal protein S14185422785454232638Rat
2741Nr3c1nuclear receptor subfamily 3, group C, member 1183127168131393320Rat
71098Csnk1a1casein kinase 1, alpha 1185501704955050184Rat
2605Fgf1fibroblast growth factor 1183068655530772667Rat
619993Atp5f1aATP synthase F1 subunit alpha187129240671300342Rat
3285Pdgfrbplatelet derived growth factor receptor beta185450000254538843Rat
69262Cdo1cysteine dioxygenase type 1183943247339447253Rat
69271Tcf4transcription factor 4186294173963288126Rat
71023Dctn4dynactin subunit 4185398235554009409Rat
69303Ndst1N-deacetylase and N-sulfotransferase 1185413688754199545Rat
3033Smad4SMAD family member 4186724374267274438Rat
3749Spink1serine peptidase inhibitor, Kazal type 1183587072335882693Rat
2313Cd74CD74 molecule185425675754266003Rat
71056Pias2protein inhibitor of activated STAT, 2187060803470714295Rat
619917Pcdh12protocadherin 12183010372830119307Rat
621347Myo5bmyosin Vb186803875968341568Rat
631441Ppp2r2bprotein phosphatase 2, regulatory subunit B, beta183465371635080889Rat
708468Spink1lserine peptidase inhibitor, Kazal type 1-like183582660735835791Rat
621717Txnl1thioredoxin-like 1185712536257155167Rat
620910Fbn2fibrillin 2185149973751703976Rat
628692Impa2inositol monophosphatase 2186083420660867575Rat
621408Csnk1g3casein kinase 1, gamma 3184728746647386538Rat
3015Loxlysyl oxidase184596431146041477Rat
620928Slc6a7solute carrier family 6 member 7185444846454467319Rat
620710Ptpn2protein tyrosine phosphatase, non-receptor type 2186122901261294662Rat
620114Rab27bRAB27B, member RAS oncogene family186359755463794124Rat
620371Raxretina and anterior neural fold homeobox185946373759467431Rat
735029Dele1DAP3 binding cell death enhancer 1183008509330098105Rat
628665Sec11cSEC11 homolog C, signal peptidase complex subunit185932093259337272Rat
2425Csf1rcolony stimulating factor 1 receptor185454667354590418Rat
621740Grpgastrin releasing peptide185938867959402061Rat
727954Tmed7transmembrane p24 trafficking protein 7183931856439325640Rat
628864Smim3small integral membrane protein 3185393001953982339Rat
620482Acaa2acetyl-CoA acyltransferase 2186834513668373246Rat
2492DccDCC netrin 1 receptor186486898765972783Rat
1303077Spink7serine peptidase inhibitor, Kazal type 7185604622756049699Rat
620522Lmnb1lamin B1185017586150215210Rat
71020Lman1lectin, mannose-binding, 1185950899659530873Rat
1306824Zfp608zinc finger protein 608184830487348412846Rat
735047Nedd4lNEDD4 like E3 ubiquitin protein ligase185839375958726709Rat
1304867Psmg2proteasome assembly chaperone 2186120866961227671Rat
628649Mc2rmelanocortin 2 receptor186200198062015567Rat
1304938Arap3ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3182980621429834217Rat
727948Ppargc1bPPARG coactivator 1 beta185475889154861103Rat
620614Il17binterleukin 17B185514119455145565Rat
620622Slc26a2solute carrier family 26 member 2185464827654666627Rat
621754Pggt1bprotein geranylgeranyltransferase type I subunit beta183895214738995656Rat
727873Gpr151G protein-coupled receptor 151183456890734570301Rat
1304815Loxhd1lipoxygenase homology PLAT domains 1187081827670969983Rat
735084Megf10multiple EGF-like domains 10185060523150755441Rat
1303338Spink6serine peptidase inhibitor, Kazal type 6183639791036409819Rat
2060Adrb2adrenoceptor beta 2185564245955644501Rat
1306835Pde6aphosphodiesterase 6A185467686354749644Rat
2963Kcnn2potassium calcium-activated channel subfamily N member 2183781796638258347Rat
621806Hsd17b4hydroxysteroid (17-beta) dehydrogenase 4184332890343417950Rat
620809Slc12a2solute carrier family 12 member 2185134828251416448Rat
1304731OacylO-acyltransferase like185921235459263722Rat
620668Synposynaptopodin185404829954106388Rat
1307238Nars1asparaginyl-tRNA synthetase 1185798930858005639Rat
708448Phaxphosphorylated adaptor for RNA export185005313350069823Rat
1305212PoliDNA polymerase iota186411677464134373Rat
2850Htr45-hydroxytryptamine receptor 4185576598155949921Rat
1306331Eif1aeukaryotic translation initiation factor 1A183932569539338043Rat
2261Camk2acalcium/calmodulin-dependent protein kinase II alpha185437864254441120Rat
1305259Afg3l2AFG3 like matrix AAA peptidase subunit 2186095426860999110Rat
3689Slc14a2solute carrier family 14 member 2187161246072039462Rat
1305596Gykl1glycerol kinase-like 1184612423946125888Rat
1305101Pudppseudouridine 5'-phosphatase184387836343880806Rat
1305106Cideacell death-inducing DFFA-like effector a186089491760920485Rat
1306734Cfap53cilia and flagella associated protein 53186788465167955873Rat
621233Cdx1caudal type homeo box 1185447244854499799Rat
1305016Pard6gpar-6 family cell polarity regulator gamma187349811973565048Rat
1305704RGD1305704similar to c-Mpl binding protein183619609136199824Rat
1306286Epg5ectopic P-granules 5 autophagy tethering factor187140399071502079Rat
1306423Dtwd2DTW domain containing 2184281178342902040Rat
1306540Spink5serine peptidase inhibitor, Kazal type 5183626445236333143Rat
1305183Cep76centrosomal protein 76186117451461208512Rat
1305184RGD1305184similar to CDNA sequence BC023105185383842653854858Rat
1310291Snx2sorting nexin 2184660222346643870Rat
1306563Ftmtferritin mitochondrial184575887445760123Rat
1304757Elac1elaC ribonuclease Z 1186732123167341358Rat
1304785Mospd4motile sperm domain containing 4183919051539191332Rat
1302934St8sia5ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5187073663270802537Rat
1304962Lars1leucyl-tRNA synthetase 1183420155534256003Rat
3031Smad2SMAD family member 2186984988469918926Rat
1307398Mrps21lmitochondrial ribosomal protein S21-like187341208073412549Rat
1305908Tnfaip8TNF alpha induced protein 8184318385443299517Rat
1309521Kcng2potassium voltage-gated channel modifier subfamily G member 2187374222473810420Rat
3047Mapk4mitogen-activated protein kinase 4186751280567661271Rat
3688Slc14a1solute carrier family 14 member 1 (Kidd blood group)187156545371608807Rat
2715GnalG protein subunit alpha L186062231160762599Rat
2410Dpysl3dihydropyrimidinase-like 3183537442935480462Rat
1305887Tubb6tubulin, beta 6 class V186094339460953031Rat
1306306Atg12autophagy related 12183945224739462424Rat
1308415Sh3rf2SH3 domain containing ring finger 2183404571534148342Rat
1305223Slc66a2solute carrier family 66 member 2187370247273739678Rat
1311719Zfp532zinc finger protein 532185908008259203672Rat
1310755Cxxc1CXXC finger protein 1186781318567818556Rat
1310759Pabpc2poly(A) binding protein, cytoplasmic 2183165421831656486Rat
1303288Spink14serine peptidase inhibitor, Kazal type 14183633922336342144Rat
1310459Pou4f3POU class 4 homeobox 3183439020534392797Rat
1308359Adamts19ADAM metallopeptidase with thrombospondin type 1 motif, 19185234644852531245Rat
1303015Commd10COMM domain containing 10183974121939874801Rat
1309023Mex3cmex-3 RNA binding family member C186716760067188595Rat
1311505Fbxo38F-box protein 38185595695056004013Rat
1311887Ctifcap binding complex dependent translation initiation factor186905615169327361Rat
1311977Slc27a6solute carrier family 27 member 6185204024152099622Rat
1310923Arhgap26Rho GTPase activating protein 26183083580631237945Rat
1310784Ska1spindle and kinetochore associated complex subunit 1186779472267805037Rat
1311580Afap1l1actin filament associated protein 1-like 1185518378655244174Rat
1311115Ap3s1adaptor related protein complex 3 subunit sigma 1183946272739531626Rat
1310740Lipglipase G, endothelial type186851492368536105Rat
1309038Sh3tc2SH3 domain and tetratricopeptide repeats 2185541638355477419Rat
1311966Rbm27RNA binding motif protein 27183427352734336124Rat
1311748Tcerg1transcription elongation regulator 1183450570834566470Rat
1359165Yipf5Yip1 domain family, member 5183212381432159752Rat
1310569Myotmyotilin183670524436724849Rat
1306864Snx24sorting nexin 24184667098746826070Rat
1308601RGD1308601similar to hypothetical protein187115595671243655Rat
1308279Adnp2ADNP homeobox 2187357187073597088Rat
1307632Isoc1isochorismatase domain containing 1185215879052179206Rat
1308714Trim36tripartite motif-containing 36183885960438912859Rat
1305493Sema6asemaphorin 6A184005062340171954Rat
1306229Setbp1SET binding protein 1187219054272551272Rat
1308488Atp8b1ATPase phospholipid transporting 8B1185801638258157213Rat
1309850Tcof1treacle ribosome biogenesis factor 1185426701554300324Rat
1308490Pcdh1protocadherin 1183001169230039679Rat
1310109NapgNSF attachment protein gamma185643962056459159Rat
1307670Ccbe1collagen and calcium binding EGF domains 1185957985159823977Rat
1307556Fechferrochelatase185794512357978327Rat
1308258Ticam2toll-like receptor adaptor molecule 2183928990239311462Rat
1308240Fchsd1FCH and double SH3 domains 1182979389929804533Rat
1305892Spire1spire-type actin nucleation factor 1186104129061171670Rat
1309111Dymdymeclin186860513168900905Rat
1310232Sall3spalt-like transcription factor 3187440605874425754Rat
1310242Arsiarylsulfatase family, member I185436441654370995Rat
1305770Rbm22RNA binding motif protein 22185401337454024182Rat
1305324Spry4sprouty RTK signaling antagonist 4183043651330451426Rat
1309195Malt1MALT1 paracaspase185894228258996318Rat
1310321Me2malic enzyme 2186735083367400987Rat
1309242RnmtRNA (guanine-7-) methyltransferase186188623061909775Rat
1307643Cplx4complexin 4185948136059504716Rat
1309322Fem1cfeminization of XX and XO animals 1C183923290039258692Rat
1308338Stk32aserine/threonine kinase 32A183525886535374985Rat
1308579Hdhd2haloacid dehalogenase-like hydrolase domain containing 2187047503770526471Rat
1311755Ctdp1CTD phosphatase subunit 1187385427773916232Rat
1308614Aldh7a1aldehyde dehydrogenase 7 family, member A1185000324250042193Rat
1309184Mppe1metallophosphoesterase 1186076341860781553Rat
1309283Sncaipsynuclein, alpha interacting protein184620584646343932Rat
1305276Rell2RELT-like 2182978999629793986Rat
1305980Mbd1methyl-CpG binding domain protein 1186786987067884501Rat
1310053Ndfip1Nedd4 family interacting protein 1183026580830316068Rat
1307692Dmxl1Dmx-like 1184299329243163457Rat
1562987RGD1562987similar to cDNA sequence BC031181186858627868594851Rat
1564790Scgb3a2secretoglobin, family 3A, member 2183593284035935762Rat
1564677Onecut2one cut homeobox 2185783164757881287Rat
1560471Arhgef37Rho guanine nucleotide exchange factor 37185493525655001017Rat
1359639Stard6StAR-related lipid transfer domain containing 6186408961864118528Rat
1560896Slc25a6solute carrier family 25 member 6186857122968572474Rat
1561134RGD1561134similar to goliath-related E3 ubiquitin ligase 4186445159264452974Rat
1561942Ccdc112coiled-coil domain containing 112183899813939032329Rat
1560009Hmgxb3HMG-box containing 3185459055854638050Rat
1565894RGD1565894similar to ribosomal protein L31185753260857533012Rat
1564428Zfp475zinc finger protein 475184607777846099232Rat
1564431Alpk2alpha-kinase 2185877560358906150Rat
1560212RGD1560212similar to DNA segment, Chr 18, Wayne State University 98, expressed187365913973665531Rat
1561581LOC317165similar to Set alpha isoform183958934139596429Rat
1563290Pcyox1lprenylcysteine oxidase 1 like185515063755161334Rat
1560341RGD1560341similar to Methionine aminopeptidase 2 (MetAP 2)184961156349613124Rat
1561039Tex43testis expressed 43185007061050073942Rat
1311016Gramd2bGRAM domain containing 2B184988401449981955Rat
1562699RGD1562699RGD1562699185782681557831464Rat
1563090Pstpip2proline-serine-threonine phosphatase-interacting protein 2187131038771396752Rat
1562779Lvrnlaeverin183960604739675247Rat
619836Wdr7WD repeat domain 7185716548257448568Rat
1303019Rpl17ribosomal protein L17186858114768584253Rat
1562758RGD1562758similar to glyceraldehyde-3-phosphate dehydrogenase186162698861628224Rat
1560919LOC502176hypothetical protein LOC502176185873293458770726Rat
1562266RGD1562266similar to Hmgb1 protein183796889837969438Rat
1359266Pmaip1phorbol-12-myristate-13-acetate-induced protein 1185998618759990174Rat
1562797Cep192centrosomal protein 192186134695761458405Rat
1559856Kctd16potassium channel tetramerization domain containing 16183216623632473067Rat
1560819Chsy3chondroitin sulfate synthase 3185264435652901257Rat
1563006Atp9bATPase phospholipid transporting 9B (putative)187417686374368993Rat
1559594Prdm6PR/SET domain 6184690411547008482Rat
1312005Minar2membrane integral NOTCH2 associated receptor 2185253971452554465Rat
1561114RGD1561114similar to hypothetical protein 4930474N05184061725440619561Rat
619909Haus1HAUS augmin-like complex, subunit 1187127541771286626Rat
1311600Zfp474zinc finger protein 474184604121046071502Rat
1560744Rnf165ring finger protein 165187098456671100836Rat
1559742Jakmip2janus kinase and microtubule interacting protein 2183553255235747938Rat
1564708Katnal2katanin catalytic subunit A1 like 2187053175970607886Rat
1311910Rbfaribosome binding factor A187363926073648942Rat
1359421Ifgga2linterferon-gamma-inducible GTPase 2 like185376111853770183Rat
1563837LOC361346similar to chromosome 18 open reading frame 54186406512564090260Rat
1560343Rps27a-ps13ribosomal protein S27a, pseudogene 13183882928838829837Rat
1303221Ppicpeptidylprolyl isomerase C184684241046855016Rat
1582966LOC688941similar to ribosomal protein L10185120988651211644Rat
1559803Mromaestro186745018667467593Rat
1564795RGD1564795similar to suppression of tumorigenicity 13186027657260277769Rat
1587255LOC498874hypothetical LOC498874185816465258227747Rat
1587257LOC498865similar to 40S ribosomal protein S2184588133245882216Rat
1585254LOC688754similar to Voltage-dependent anion-selective channel protein 1 (VDAC-1) (mVDAC1) (mVDAC5) (Outer mitochondrial membrane protein porin 1) (Plasmalemmal porin)185000323150005074Rat
1559536RGD1559536similar to vitellogenin-like 1 precursor183648827536491647Rat
1586403LOC688697similar to ribosomal protein S9184981504649815625Rat
1585817LOC680972similar to ribosomal protein L36183328138633281699Rat
1585231Grpel2GrpE-like 2, mitochondrial185516783155180073Rat
1561424Ccdc68coiled-coil domain containing 68186354182863584122Rat
69314Smad7SMAD family member 7186898842969016774Rat
1561627RGD1561627similar to hypothetical protein 4930474N05184068333040686500Rat
1562909Dcp2decapping mRNA 2183675073236787067Rat
1563060RGD1563060similar to AVLV472183594840235969502Rat
1565948Siglec15sialic acid binding Ig-like lectin 15187150777371521722Rat
1566303RGD1566303similar to LRRGT00004186009713760098997Rat
1565797MGC105567similar to cDNA sequence BC023105185387083853890135Rat
1565619Cep120centrosomal protein 120184712797947189964Rat
1565291RGD1565291similar to TGF beta-inducible nuclear protein 1 (L-name related LNR42)187314001173140730Rat
1561988MccMCC regulator of WNT signaling pathway183679420637266237Rat
1564477RGD1564477similar to cytoskeleton associated protein 2186381875863822861Rat
1359600Fam210afamily with sequence similarity 210, member A186184644761886123Rat
1565632Prrc1proline-rich coiled-coil 1185081254850846273Rat
1359308Marchf3membrane associated ring-CH-type finger 3185023721850389343Rat
1565118Ablim3actin binding LIM protein family, member 3185525613555376629Rat
1563192Ythdc2YTH domain containing 2183726655937331681Rat
1565083RGD1565083similar to hypothetical protein 4930474N05184070374040708549Rat
1359398Srfbp1serum response factor binding protein 1184592038945945385Rat
1564528Prr16proline rich 16184442434844764796Rat
1582858Prelid3aPRELI domain containing 3A186099889861034821Rat
1565393Fam170afamily with sequence similarity 170, member A184352130443526036Rat
1582973Piezo2piezo-type mechanosensitive ion channel component 2185646844956844984Rat
1593500Chmp1bcharged multivesicular body protein 1B186074034960742879Rat
1589962Apcdd1APC down-regulated 1185638539856416065Rat
1589576Rnf14ring finger protein 14183013162730155686Rat
1588513Plac8l1PLAC8-like 1183416766734192137Rat
1588514LOC364851similar to transketolase183384251033844384Rat
1585624Gnpda1glucosamine-6-phosphate deaminase 1183016543530177462Rat
1584696Grxcr2glutaredoxin and cysteine rich domain containing 2183398468933998094Rat
1587656LOC688523similar to heat shock protein 8184746631247468407Rat
1587105Ldlrad4low density lipoprotein receptor class A domain containing 4186151925361848403Rat
1588510LOC364874similar to nucleolar protein family A, member 2184650591846506926Rat
1588511LOC364872similar to TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor184253132642533253Rat
1590648LOC680512similar to 60S ribosomal protein L38186743513167435363Rat
1584707Prelid2PRELI domain containing 2183386993433961320Rat
1590896LOC307465similar to karyopherin (importin) alpha 2183276966932776779Rat
1598071Skor2SKI family transcriptional corepressor 2187040443170446330Rat
1595452Mbd2methyl-CpG binding domain protein 2186417400264240795Rat
1596483LOC685213similar to muscleblind-like 3187325598673256960Rat
1594273LOC678956similar to endothelial differentiation-related factor 1 isoform beta186802956668030298Rat
1594056LOC681584similar to ribosomal protein S3A184597702545981745Rat
1594355LOC502175similar to peroxiredoxin 1185768022257680814Rat
1594356LOC502174similar to 40S ribosomal protein S7 (S8)185759871757647400Rat
1596811Dynapdynactin associated protein186388516463909464Rat
1591057Spink13serine peptidase inhibitor Kazal type 13185606483956206257Rat
1594778Myoz3myozenin 3185402585854046505Rat
1596746Spink9serine peptidase inhibitor, Kazal type 9183642704336430271Rat
1592565LOC685583similar to Dynactin subunit 5 (Dynactin subunit p25)184113594941136476Rat
1591841Zbtb7czinc finger and BTB domain containing 7C186944161669765744Rat
1594572LOC291547similar to 60S ribosomal protein L18185996343659964074Rat
1595054Arl14eplADP ribosylation factor like GTPase 14 effector protein like183967987739711929Rat
1597724LOC685159similar to ribosomal protein S18187311321773113717Rat
2300148Ctxn3cortexin 3185093024450940642Rat
2299854LOC100174910glutaredoxin-like protein185042407950442172Rat
2301798Hsbp1l1heat shock factor binding protein 1-like 1187368228673690061Rat
2318552LOC100362233aminomethyltransferase-like184659815746600013Rat
2318109LOC100362479ribosomal protein L15-like184827133648272058Rat
2319357Nfatc1nuclear factor of activated T-cells 1187404642174156041Rat
2320365Spink10serine peptidase inhibitor, Kazal type 10185610053556111771Rat
2321355LOC100360803ribosomal protein L37-like186480459464869547Rat
2322794LOC100363554LUC7-like 3-like186030551760306759Rat
2322845LOC100363502cytochrome c, somatic-like186028282660284023Rat
2320730LOC100361130ribosomal protein S23-like185509504755095573Rat
2321524LOC100360734trafficking protein particle complex 6B-like185994739559948031Rat
2323104LOC100359941high mobility group protein HMG-I/HMG-Y-like186468714864687453Rat
2323168Selenok-ps5selenoprotein K, pseudogene 5183377230033772969Rat
2323247LOC100359896hypothetical LOC100359896184720571347268105Rat
2322702LOC10036014726S proteasome non-ATPase regulatory subunit 14-like185608967356096216Rat
2323345LOC100363296ribosomal protein L13a-like185905781659058468Rat
2323363LOC100363277Ribosomal protein, large, P0-like183366415833665636Rat
2323524LOC100359716N-acetyltransferase 13-like185233697052337537Rat
4888557Mir3557microRNA 3557185485853754858649Rat
2325365Mir378microRNA 378185485855954858623Rat
2325445Snora36csmall nucleolar RNA, H/ACA box 36C184595202145952079Rat
2323953LOC100362825hypothetical LOC100362825183766285137663207Rat
2325565Mir145microRNA 145185509964055099727Rat
2325566Mir143microRNA 143185510100655101110Rat
2325577Mir122microRNA 122185875870358758787Rat
4109663Cct6a-ps5chaperonin containing Tcp1, subunit 6A (zeta 1), pseudogene 5183404009034042051Rat
4888568Mir3591microRNA 3591185875869058758798Rat
6488390LOC100912208thioredoxin-like protein 4A-like185987908759925914Rat
6485424LOC10091287840S ribosomal protein S17-like186784343767844166Rat
6492735Txnl4athioredoxin-like 4A187365910773674893Rat
6493059LOC100911367uncharacterized LOC100911367183123627731252492Rat
6493141LOC100911388SNW domain-containing protein 1-like187347604273477748Rat
6502122LOC100909759prohibitin-like183613707836137951Rat
6499334LOC100910311cofilin-1-like184987260949875704Rat
6502918LOC100909541ATP synthase subunit g, mitochondrial-like183382700033827309Rat
6499835LOC100910189uncharacterized LOC100910189185094267750948659Rat
6503656LOC100909457uncharacterized LOC100909457187336895973370670Rat
6498213LOC100910457serine/threonine-protein phosphatase 4 regulatory subunit 1-like185079171850793723Rat
7500552LOC102548951uncharacterized LOC102548951185343914553494664Rat
7524555LOC102556416uncharacterized LOC102556416184850279948514950Rat
7507860LOC102556053uncharacterized LOC102556053186898302068985981Rat
7508595LOC102553626uncharacterized LOC102553626187257110972588072Rat
7509468LOC102547869uncharacterized LOC102547869183346394133546731Rat
7509835LOC102547035serine protease inhibitor Kazal-type 9-like185601533656031021Rat
7512865LOC102548287uncharacterized LOC102548287187469983274719059Rat
7512909LOC102556293uncharacterized LOC102556293185565595755676904Rat
7515734LOC102549109uncharacterized LOC102549109185350406953767681Rat
7499022LOC102552571uncharacterized LOC102552571186839834768406835Rat
7516836LOC102548285uncharacterized LOC102548285186380156463806104Rat
7538513LOC102548286peroxisomal biogenesis factor 19-like186917896169181127Rat
7631690LOC102555171uncharacterized LOC102555171184388823643911640Rat
7647004LOC102549578uncharacterized LOC102549578186994404669961893Rat
7633439LOC102552297uncharacterized LOC102552297186136366461373917Rat
7648927LOC102548225uncharacterized LOC102548225186932739069360937Rat
7622461LOC102551934uncharacterized LOC102551934186767609367688061Rat
7622590LOC102546966uncharacterized LOC102546966183936327239393454Rat
7652610LOC10255584340S ribosomal protein S9-like183922180339227306Rat
7559217LOC102546310uncharacterized LOC102546310184868416248697398Rat
7623636LOC102554236high mobility group protein B1-like184277964542780645Rat
7659833LOC102551787uncharacterized LOC102551787187081710770836625Rat
7609587LOC102553013uncharacterized LOC102553013185782355957827741Rat
7644990LOC102553338uncharacterized LOC102553338187186341071893869Rat
7616480LOC102548061uncharacterized LOC102548061186206865262155679Rat
7570467LOC10254703440S ribosomal protein S23-like183943526439439787Rat
7557086LOC102553659MLV-related proviral Env polyprotein-like183458617634588127Rat
7546100LOC102550733uncharacterized LOC102550733185433675454348014Rat
7600819LOC10255366060S ribosomal protein L32-like184974448249744866Rat
7600825LOC102556385uncharacterized LOC102556385186946033069498748Rat
7550695LOC102551968uncharacterized LOC102551968187111121471119937Rat
7550710Dynapl1dynactin associated protein-like 1186386513663868338Rat
7552381LOC102553083uncharacterized LOC102553083185825709058286296Rat
7553718LOC102546473uncharacterized LOC102546473184878985148824534Rat
7607328LOC102547544uncharacterized LOC102547544185038879350432358Rat
7567679LOC102551356uncharacterized LOC102551356186002982260038450Rat
7694763LOC102551836uncharacterized LOC102551836186067679260692718Rat
7673145LOC102553274uncharacterized LOC102553274187158870371590861Rat
7673459LOC102547870sporulation-specific protein 15-like185104189251063413Rat
7724951LOC102551667uncharacterized LOC102551667186730197267307063Rat
7725693LOC102551612uncharacterized LOC102551612186729772667301603Rat
7683561LOC102548224uncharacterized LOC102548224185187889351882599Rat
7732886LOC102552068uncharacterized LOC102552068187072176370747209Rat
7719142LOC102548758uncharacterized LOC102548758185299200353016509Rat
7671108LOC102553546uncharacterized LOC102553546187256070072563152Rat
7701056LOC102547511uncharacterized LOC102547511183045148430489138Rat
7746354LOC102553737uncharacterized LOC102553737187264573272683260Rat
7675035LOC102557471uncharacterized LOC102557471186840506868412280Rat
7748007LOC102550835interferon-inducible GTPase 1-like185390703453909527Rat
7727741LOC102554148uncharacterized LOC102554148187336590773384828Rat
7748583LOC10254734540S ribosomal protein S3-like185037643650381362Rat
7709716LOC102556109uncharacterized LOC102556109184823383048240312Rat
7711234LOC102546616uncharacterized LOC102546616184890847948921579Rat
7681870LOC102553438U6 snRNA-associated Sm-like protein LSm7-like186008223760093262Rat
9089884LOC103694249uncharacterized LOC103694249187383997173861419Rat
9179805LOC103694262cyclin-dependent kinase 1 pseudogene183390562033906471Rat
9147617LOC103694265glyceraldehyde-3-phosphate dehydrogenase pseudogene184933949349340503Rat
9186345LOC103694223uncharacterized LOC103694223185072736850744395Rat
9154410LOC103694247uncharacterized LOC103694247187340759873411932Rat
9158344LOC103694268cytochrome b-c1 complex subunit 7 pseudogene186100109961001697Rat
9166873LOC103694213uncharacterized LOC103694213184423467544237227Rat
9210109LOC103694209transcription intermediary factor 1-beta pseudogene184284505742847327Rat
9214050LOC103694217uncharacterized LOC103694217184769795247701748Rat
9311300LOC103694218glyceraldehyde-3-phosphate dehydrogenase pseudogene184784431047845271Rat
9355802LOC10369420860S acidic ribosomal protein P0 pseudogene184056169340567823Rat
9367157LOC10369420440S ribosomal protein SA pseudogene183417172934177399Rat
9383011LOC103694235uncharacterized LOC103694235186219624362205929Rat
9366255LOC103694233thymosin beta-10 pseudogene186133109661332947Rat
9389965LOC103694484serine protease inhibitor Kazal-type 11-like183655874536564946Rat
9438210LOC10369427160S ribosomal protein L31 pseudogene186743212967432682Rat
9445303LOC103694199uncharacterized LOC103694199183364028333664881Rat
11371572LOC108348797uncharacterized LOC108348797185578286455807163Rat
11366002LOC108348790uncharacterized LOC108348790184033970740602981Rat
11462331LOC108348812uncharacterized LOC108348812186785761467864070Rat
11465729LOC108348805uncharacterized LOC108348805185982392859852542Rat
11465878LOC108348808uncharacterized LOC108348808186249611662509136Rat
11466718LOC108353288glyceraldehyde-3-phosphate dehydrogenase pseudogene183651762836518734Rat
11357405LOC10834927160S ribosomal protein L30-like183621549436215836Rat
11435416LOC108348861glyceraldehyde-3-phosphate dehydrogenase pseudogene186779138267793462Rat
11361905LOC108348849glyceraldehyde-3-phosphate dehydrogenase pseudogene183189817631899193Rat
11367741LOC10834878160S ribosomal protein L31 pseudogene183886606938866668Rat
11369277LOC108348772uncharacterized LOC108348772182998329130000247Rat
11438639LOC108348823uncharacterized LOC108348823187357666873581335Rat
11363540LOC108348824uncharacterized LOC108348824187362653073630136Rat
11439714LOC10834874060S acidic ribosomal protein P0 pseudogene187363607173636735Rat
11432148LOC108348739uncharacterized LOC108348739187110147071110704Rat
11441724LOC108348786uncharacterized LOC108348786184027023140285758Rat
11405714LOC108348827uncharacterized LOC108348827187442548874431245Rat
11413693LOC108348854uncharacterized LOC108348854184951839349582098Rat
11421033LOC108348813putative 60S ribosomal protein L37a186793257967936520Rat
11423228LOC108348815uncharacterized LOC108348815186811253168116297Rat
11423870LOC108348793uncharacterized LOC108348793184798243348011398Rat
11409749LOC108348794uncharacterized LOC108348794184841048948492264Rat
11377511LOC10835318040S ribosomal protein S10 pseudogene184090970040923256Rat
11411640LOC10834885640S ribosomal protein S25 pseudogene185903362859034270Rat
11390513LOC108353179glyceraldehyde-3-phosphate dehydrogenase pseudogene183993791639939405Rat
11402245LOC108348868uncharacterized LOC108348868186520005065209636Rat
11403005LOC108348801uncharacterized LOC108348801185886018958897832Rat
11380959LOC108348734ubiquitin-40S ribosomal protein S27a pseudogene183459997134606116Rat
11392115LOC108348736nucleophosmin pseudogene185060255250603044Rat
11392733LOC108348860uncharacterized LOC108348860186771436967723766Rat
11519999LOC108353168uncharacterized LOC108353168183503587735042715Rat
11502477LOC10834885040S ribosomal protein S28 pseudogene183385617433856387Rat
11479093LOC108353173heterogeneous nuclear ribonucleoprotein A3 pseudogene186102871661033474Rat
11508213LOC108348798uncharacterized LOC108348798185624247156248072Rat
11512190LOC108348789uncharacterized LOC108348789184080322240840824Rat
11512205LOC108348809uncharacterized LOC108348809186267937362697171Rat
11486529LOC108348778uncharacterized LOC108348778183544942535484306Rat
11517837LOC10834878060S ribosomal protein L9 pseudogene183884956538858189Rat
11489235LOC108348800uncharacterized LOC108348800185746136957468508Rat
13831342Ancv1rancient vomeronasal 1 receptor184626206046263031Rat
41321002LOC120098399small nucleolar RNA SNORA17186007453260074652Rat
41353404LOC120098249uncharacterized LOC120098249184896444848970595Rat
41378201LOC120098163uncharacterized LOC120098163185518933055191531Rat
41087158LOC120098288uncharacterized LOC120098288183555290035589518Rat
41138072LOC120098211uncharacterized LOC120098211184867342048686049Rat
41138415LOC120098442U6 spliceosomal RNA185737920457379309Rat
41167261LOC120098275uncharacterized LOC120098275185412539654133520Rat
41167718LOC120098315uncharacterized LOC120098315183074279630779070Rat
41202754LOC120098212uncharacterized LOC120098212185907224659093316Rat
41202954LOC120098281uncharacterized LOC120098281186811665168125174Rat
41204079LOC120098214uncharacterized LOC120098214184577375145814577Rat
41281389LOC120098134ral guanine nucleotide dissociation stimulator-like184065064740652491Rat
41282139LOC120098235uncharacterized LOC120098235187358137173597096Rat
41282418LOC120098155uncharacterized LOC120098155185255029452553031Rat
41380615LOC120098400U1 spliceosomal RNA187209272472092872Rat
41113718LOC120098223uncharacterized LOC120098223186849854468500778Rat
41168943LOC120098429U6 spliceosomal RNA183383705933837165Rat
41204336LOC120098363small nucleolar RNA SNORA42/SNORA80 family186056304960563183Rat
41204719LOC120098295uncharacterized LOC120098295184991017449914559Rat
41204778LOC120098421U4 spliceosomal RNA183751742337517585Rat
41249766Fam136a-ps1family with sequence similarity 136, member A, pseudogene 1186062292560631357Rat
41250372LOC120098294uncharacterized LOC120098294184318089943183580Rat
41381474LOC120098132ral guanine nucleotide dissociation stimulator-like184063089840632705Rat
41383976LOC120098209uncharacterized LOC120098209186018363660194583Rat
41170335LOC120098358small Cajal body-specific RNA 18186834447568344553Rat
41170621NEWGENE_40964986transfer RNA alanine (anticodon GGC)185689805556898129Rat
41205980LOC120098204uncharacterized LOC120098204183140744231452476Rat
41278987LOC120098109developmental pluripotency-associated protein 4-like184260173142602746Rat
41279532LOC120098327uncharacterized LOC120098327187105897771061228Rat
41285070LOC120098190uncharacterized LOC120098190186247060262487267Rat
41325821LOC120098234uncharacterized LOC120098234185172090351728238Rat
41358046LOC120098233uncharacterized LOC120098233184422798944232358Rat
41142472LOC120098306uncharacterized LOC120098306185868582858687512Rat
41142733LOC12009828960S ribosomal protein L13-like185366148053667294Rat
41207243LOC120093100non-histone chromosomal protein HMG-14-like184401685844017148Rat
41254053LOC120098171glyceraldehyde-3-phosphate dehydrogenase-like186045712460458562Rat
41280604LOC120098164uncharacterized LOC120098164187425377074264525Rat
41360675LOC120098405small nucleolar RNA SNORA76184883879448838929Rat
41360939LOC12009813040S ribosomal protein SA-like184067805240680420Rat
41386982LOC120098247uncharacterized LOC120098247186019638960198601Rat
41116435LOC120098205uncharacterized LOC120098205186941859969427348Rat
41145245LOC120098180uncharacterized LOC120098180185835272558365404Rat
41254274LOC120098116uncharacterized LOC120098116186834413968344878Rat
41259955LOC120098353small nucleolar RNA SNORD58186858186468581929Rat
41328206LOC120098333cytochrome c oxidase subunit 7C, mitochondrial-like183094480030944969Rat
41389142LOC120098238interferon-inducible GTPase 1-like185378908553794279Rat
41119031LOC120098446U6 spliceosomal RNA185113625651136360Rat
41187398LOC120098341U6 spliceosomal RNA185828961858289715Rat
41187572LOC120098441U6 spliceosomal RNA185634998356350089Rat
41187941LOC120098172tubulin alpha-1B chain-like186148541761521355Rat
41211839LOC120098196uncharacterized LOC120098196184404997044050979Rat
41262908LOC120098131ral guanine nucleotide dissociation stimulator-like184066381040665642Rat
41331930LOC120098240uncharacterized LOC120098240186059041860612179Rat
41391092LOC120098113uncharacterized LOC120098113185509784855118810Rat
41150328LOC120098334uncharacterized LOC120098334183048918730498974Rat
41178527LOC12009819840S ribosomal protein SA-like184070003640701857Rat
41263179LOC120098347U7 small nuclear RNA183674840836748463Rat
41263870LOC120098199uncharacterized LOC120098199185198367251999725Rat
41365840LOC120098251uncharacterized LOC120098251185010415650125611Rat
41393772LOC120098307uncharacterized LOC120098307185869770758707320Rat
41122412LOC120098280uncharacterized LOC120098280186820515668215370Rat
41191641LOC120098380small nucleolar RNA SNORA17187121311971213246Rat
41395188LOC120098256uncharacterized LOC120098256185903613759041329Rat
41155797LOC120098440U6 spliceosomal RNA186864373768643836Rat
41181045LOC120098362small nucleolar RNA SNORA44184055324640553374Rat
41181979LOC120098365small nucleolar RNA SNORA22186798570267985828Rat
41345076LOC120098351small nucleolar RNA SNORD58186858269168582755Rat
41126198LOC120098227uncharacterized LOC120098227185754185757548461Rat
41183030LOC120098226uncharacterized LOC120098226184959616449608824Rat
41218349LOC120098119uncharacterized LOC120098119183412359534151088Rat
41372130LOC120098202uncharacterized LOC120098202185540050855401347Rat
41070206LOC120098346U1 spliceosomal RNA184573628345736446Rat
41103344LOC120098357U1 spliceosomal RNA186104474161044905Rat
41183907LOC120098188uncharacterized LOC120098188187008676970091898Rat
41292884LOC120098287uncharacterized LOC120098287185597921556004282Rat
41348430LOC120098312uncharacterized LOC120098312187048410570488354Rat
41348796LOC120098148uncharacterized LOC120098148184291366142926697Rat
41348875LOC120098140S-phase kinase-associated protein 1-like183684992036861172Rat
41400088LOC120098151uncharacterized LOC120098151185549906955508163Rat
41400349LOC120098179uncharacterized LOC120098179187377069873773756Rat
41071324LOC120098173DNA-directed RNA polymerases I, II, and III subunit RPABC4-like186424932864249758Rat
41104312LOC120098139ELMO domain-containing protein 2-like183776210637766355Rat
41196987LOC120093049small nucleolar RNA SNORA19183304590833046048Rat
41294005LOC120098118protein transport protein Sec61 subunit gamma-like183405554034064422Rat
41400860LOC120098424U6 spliceosomal RNA184714239647142502Rat
41107086LOC120098367small nucleolar RNA SNORA33186142409361424221Rat
41130071LOC120098161serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform-like183376815333771743Rat
41230124LOC120098192uncharacterized LOC120098192185233788352339814Rat
41272761LOC12009832339S ribosomal protein L35, mitochondrial-like185058067450581203Rat
41273283LOC120098308multifunctional methyltransferase subunit TRM112-like protein186182926261829727Rat
41295430LOC120098169uncharacterized LOC120098169185473616654737789Rat
41375324LOC12009827360S ribosomal protein L31-like185120879251209727Rat
41402961LOC120098335uncharacterized LOC120098335183108878631096355Rat
41082659LOC120098371small nucleolar RNA SNORA48184023847240238610Rat
41132838LOC120098259uncharacterized LOC120098259186095927460961550Rat
41165015LOC12009828360S ribosomal protein L19-like186425083464251878Rat
41231671LOC120098435U6 spliceosomal RNA183274616632746268Rat
41320469LOC120098124uncharacterized LOC120098124183024868730258445Rat
41109294LOC120098150uncharacterized LOC120098150185043261950435501Rat
40996812LOC120098195uncharacterized LOC120098195185902615459032101Rat
40947909LOC120098110uncharacterized LOC120098110185454967654554826Rat
41012098LOC120098201uncharacterized LOC120098201187034423170366410Rat
41340267LOC120098285arfaptin-2-like183986744639910623Rat
41340273LOC120098215uncharacterized LOC120098215184024068340242284Rat
40950388LOC120098342U6 spliceosomal RNA183920541339205511Rat
40974709LOC120098445U6 spliceosomal RNA185144715251447238Rat
40975022LOC120098189uncharacterized LOC120098189184316491043169872Rat
40977190LOC120098292uncharacterized LOC120098292184340028343401770Rat
41012624LOC120098361small nucleolar RNA SNORA15184550715845507287Rat
41013740LOC120098370small nucleolar RNA SNORA48185080877250808913Rat
40926626LOC12009832160S ribosomal protein L15-like184294955342953517Rat
40926764Trnap-aggtransfer RNA proline (anticodon AGG)186853920168539283Rat
40928311LOC120098293uncharacterized LOC120098293184325026943258124Rat
40955792LOC120098422U4 spliceosomal RNA186379633663796423Rat
40999476LOC120098176epidermal growth factor-like protein 7186731495667318012Rat
41001054MarcolMARCO like183644871436455171Rat
41002194LOC120098133ral guanine nucleotide dissociation stimulator-like184067038140672225Rat
40930674LOC120098374small nucleolar RNA SNORA48186052144960521579Rat
40983148LOC120098183uncharacterized LOC120098183186380773563810721Rat
40984187LOC120098108uncharacterized LOC120098108187239469772424213Rat
40962036LOC120098244uncharacterized LOC120098244183811211938113056Rat
40986011LOC120093103uncharacterized LOC120093103186394753763952623Rat
40936624LOC120098194high mobility group protein B1-like187296508972965701Rat
40937264LOC120098218uncharacterized LOC120098218187016958470179983Rat
40937555LOC120098319galectin-1-like183967636339676849Rat
41008075LOC120098393small nucleolar RNA SNORA17184971287249712990Rat
40940698LOC120098414U2 spliceosomal RNA186065208560652252Rat
40966738LOC120098258cytochrome c oxidase subunit 6C-2-like184012990640156314Rat
40991777LOC120098276uncharacterized LOC120098276184273080342754690Rat
40942548LOC120098154uncharacterized LOC120098154186563315965639597Rat
40969390LOC120098448U6 spliceosomal RNA183013293230133034Rat
40943302LOC120098177serine/arginine repetitive matrix protein 5-like187253578672551452Rat
40943372NEWGENE_40926764transfer RNA proline (anticodon AGG)183263524732635327Rat
40994721LOC120098126uncharacterized LOC120098126183028433330287973Rat
41075010LOC120098344U7 small nuclear RNA186772038467720448Rat
41243114LOC120098279uncharacterized LOC120098279186826156968264363Rat
41312473LOC120098436U6 spliceosomal RNA183509264235092748Rat
41024760LOC120098433U6 spliceosomal RNA183509155335091659Rat
41244098LOC120098156ubiquitin-conjugating enzyme E2 C-like183232131632321725Rat
41313779LOC120098366U1 spliceosomal RNA187216679172166942Rat
41314139LOC120098170glyceraldehyde-3-phosphate dehydrogenase-like186027355160273961Rat
41050822LOC120098120uncharacterized LOC120098120186914109969145517Rat
41315866LOC120098241uncharacterized LOC120098241186063690560660960Rat
41316021LOC120098135ral guanine nucleotide dissociation stimulator-like184063747540639294Rat
41051463LOC120098369small nucleolar RNA SNORA48184804589548046039Rat
41079746LOC120098236protein NYNRIN-like186796120067964366Rat
41319348LOC120098152glyceraldehyde-3-phosphate dehydrogenase-like186045510760457522Rat
41319352LOC120098386small nucleolar RNA SNORA17183856641238566541Rat
41332315LOC120098394small nucleolar RNA SNORA17187303346273033556Rat
41135261LOC120098320ral guanine nucleotide dissociation stimulator-like184064370440645714Rat
41332966LOC1200984125S ribosomal RNA185765745157657572Rat
41144187LOC120098114uncharacterized LOC120098114185509639455099323Rat
41255796LOC120098278uncharacterized LOC120098278184641715146443203Rat
41255892LOC120098245uncharacterized LOC120098245183846009938528233Rat
41221436LOC120098149uncharacterized LOC120098149185044203450458966Rat
41318096LOC120098372small nucleolar RNA SNORA48184292275042922894Rat
41031843LOC120098291uncharacterized LOC120098291186766127967664893Rat
41222912LOC120098379small nucleolar RNA SNORA17185210115752101288Rat
41315393LOC120098225NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1-like186056202260562179Rat
41033816LOC120098117uncharacterized LOC120098117183956142139598719Rat
41034624LOC120098136ral guanine nucleotide dissociation stimulator-like184062384040626145Rat
41224917LOC120098242uncharacterized LOC120098242186070732560711524Rat
41300370LOC120098318NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-like183873165238733382Rat
41035120LOC120098336uncharacterized LOC120098336185881556058817400Rat
41302367LOC120098127uncharacterized LOC120098127183035758630383465Rat
41334865LOC120098375small nucleolar RNA SNORA48185876537658765506Rat
41335071LOC120098337uncharacterized LOC120098337183890209038902853Rat
41227966LOC120098128uncharacterized LOC120098128186780440567806260Rat
41017389LOC12009825260S acidic ribosomal protein P1-like185906596859068700Rat
41236582LOC12009812560S ribosomal protein L34-like183028140630281757Rat
41304392LOC120098157uncharacterized LOC120098157187475585674793734Rat
41305794LOC120098444U6 spliceosomal RNA183673526536735369Rat
41017586LOC120098322developmental pluripotency-associated protein 2-like184552460645525235Rat
41067363LOC120098392small nucleolar RNA SNORA17183884195738842096Rat
41237717LOC120098352small nucleolar RNA SNORD58186858225868582322Rat
41306054LOC120098339uncharacterized LOC120098339186083857560844484Rat
41044127LOC120098437U6 spliceosomal RNA183435359034353693Rat
41069369LOC120098373small nucleolar RNA SNORA48185228960352289735Rat
41239754LOC120098230uncharacterized LOC120098230184771490447721590Rat
41239909LOC120098447U6 spliceosomal RNA185493098054931089Rat
41021142LOC120098368small Cajal body-specific RNA 17186834462768344767Rat
41045620LOC120098182uncharacterized LOC120098182185893713558941989Rat
41073968LOC120098137ral guanine nucleotide dissociation stimulator-like184065687640658910Rat
41309698LOC120098174glyceraldehyde-3-phosphate dehydrogenase-like186461258664613065Rat
41310031LOC120098420U4 spliceosomal RNA184453511344535283Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10108D18Mgh11344185564260755642948Ratregion
10647D18Wox12140186037761560377755Ratregion
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34421D15Mgh10109187114739571147526Ratregion
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36816D18Rat12222186938409269384326Ratregion
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5503294UniSTS:237814203185084598750846190Ratregion
5503296UniSTS:237838320186328689963287219Ratregion
5503784UniSTS:471069118185564299555643113Ratregion
5503908Csf1r342185456783354568481Ratregion
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5505867Htr479185588487255884951Ratregion
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5506549MADH2_1658608186991115469911762Ratregion
5506712AF010230169186725190467252073Ratregion
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5507281fb33h01.x1815185227787252278687Ratregion
5506983fd13c04.x11344184283014142831485Ratregion
5507045UniSTS:224229104185259871152598815Ratregion
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5499795UniSTS:234690229183619942536199654Ratregion
5500115UniSTS:236884982183562906335630045Ratregion
5500346GDB:201899155186529627165296426Ratregion
5500519RH135833119184961261949612738Ratregion
5500891STS-Z407940186327565363275991Ratregion
5500965MARC_9990-9991:997195997:1102183452710534528197Ratregion
5503298UniSTS:237853133187357293273573065Ratregion
5503300UniSTS:237833200186074091960741119Ratregion
5501055PMC129968P1201184660237246602573Ratregion
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5501217PMC156124P3298186095190660952204Ratregion
5501494D12S881343187394033473940677Ratregion
5501538STS-Z40841735184392949343930228Ratregion
5501604RH36897670186927149769272167Ratregion
5504474PMC219482P283185456689254566975Ratregion
5505144Onecut277185783248857832565Ratregion
5501373STS-X524861389185884672658848115Ratregion
5501546WI-11812143183953137339531516Ratregion
5505538D9S286720186695011566950835Ratregion
5501778MARC_12115-12116:1004707389:1117185458905554589477Ratregion
5502134MARC_5405-5406:996690354:163183366430733664370Ratregion
5502756FEM1C292183923742639237718Ratregion
5506777G452980185811316258113709Ratregion
5506777G452980185811342158113709Ratregion
5506885G47243250186881713968817391Ratregion
5507209UniSTS:225275155185444049954440654Ratregion
Position Markers

Peak: (D18Rat57)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21852,292,875 - 52,293,055 (+)MAPPER
Rnor_6.01853,861,252 - 53,861,431NCBI
Rnor_5.01853,100,479 - 53,100,658UniSTS
RGSC_v3.41854,605,732 - 54,605,912RGD
RGSC_v3.41854,605,733 - 54,605,912UniSTS
RGSC_v3.11854,674,164 - 54,674,343RGD
Celera1850,397,794 - 50,397,973UniSTS
RH 3.4 Map18477.92UniSTS
RH 3.4 Map18477.92RGD
RH 2.0 Map18409.0RGD
SHRSP x BN Map1821.6699RGD
FHH x ACI Map1830.38RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2312598Bp340Blood pressure QTL 3400.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)18130558703Rat
2300180Bmd67Bone mineral density QTL 674.80.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)18134291613Rat
2293661Bss50Bone structure and strength QTL 504.640.0003lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)18134291613Rat
61388Bp2Blood pressure QTL 23.23arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)18135374722Rat
9589153Insul31Insulin level QTL 317.150.05blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)18142547119Rat
2299160Iddm35Insulin dependent diabetes mellitus QTL 352.79blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)18420794160377792Rat
2312568Glom21Glomerulus QTL 2120.005kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)18518585840503530Rat
2293708Bss46Bone structure and strength QTL 468.80.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)181179151863636873Rat
1578661Bss20Bone structure and strength QTL 203.7femur morphology trait (VT:0000559)femoral neck cross-sectional area (CMO:0001697)181179151883218561Rat
1578667Bss21Bone structure and strength QTL 213.5femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)181179151883218561Rat
61382Bp46Blood pressure QTL 4618.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)181194179131393320Rat
631264Scl22Serum cholesterol level QTL 226.2blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)181194179131393320Rat
1331766Bp236Blood pressure QTL 2363.022arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)181194429931359530Rat
61375Bp41Blood pressure QTL 412.4blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)181194429941122201Rat
1331753Bp231Blood pressure QTL 2313.643arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)181194429952293055Rat
1358358Sradr6Stress Responsive Adrenal Weight QTL 62.49adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)181194429959330563Rat
6903359Bp355Blood pressure QTL 3553.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)181194454459796478Rat
2313082Bss85Bone structure and strength QTL 850.80.0001long bone metaphysis morphology trait (VT:0000133)tibia midshaft total cross-sectional area (CMO:0001715)181495133759951337Rat
1358193Emca2Estrogen-induced mammary cancer QTL 21.6mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)181800759963571040Rat
1331735Rf44Renal function QTL 442.981total urine protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)181823456431359530Rat
1331775Bp235Blood pressure QTL 2353.201arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)181823456431359530Rat
1600373Mamtr6Mammary tumor resistance QTL 6mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)181927890183218561Rat
1331741Bp232Blood pressure QTL 2323.59112arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)182137289383213037Rat
1641923Colcr8Colorectal carcinoma resistance QTL 83.10.0014intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor number (CMO:0002076)182206624252293055Rat
1331733Bp233Blood pressure QTL 2333.97196arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182479697779788953Rat
2325839Bp348Blood pressure QTL 3480.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182557098570570985Rat
12904673Cm127Cardiac mass QTL 1270.005heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)182654808246969551Rat
12904675Am19Aortic mass QTL 190.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)182654808246969551Rat
12904677Kidm72Kidney mass QTL 720.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)182654808246969551Rat
12904668Bw188Body weight QTL 1880.03body mass (VT:0001259)body weight (CMO:0000012)182654808246969551Rat
12904669Cm125Cardiac mass QTL 1250.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)182654808246969551Rat
12904670Cm126Cardiac mass QTL 1260.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)182654808246969551Rat
2301413Bp318Blood pressure QTL 3180.002arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182654808246969551Rat
2293704Bss35Bone structure and strength QTL 354.590.0002femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)182896485373964853Rat
2300157Bmd66Bone mineral density QTL 6613.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)182896485373964853Rat
2300177Bmd65Bone mineral density QTL 6519.70.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)182896485373964853Rat
9589816Gluco68Glucose level QTL 687.250.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)182979296574792965Rat
8694378Bw157Body weight QTL 1573.590.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)182979296574792965Rat
9590318Scort22Serum corticosterone level QTL 227.640.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)182979296574792965Rat
1331754Bp230Blood pressure QTL 2304.61609arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182979296574792965Rat
738005Anxrr11Anxiety related response QTL 113.4exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)183003981375039813Rat
61383Bp47Blood pressure QTL 4717.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)183127168160377755Rat
1331742Bp228Blood pressure QTL 2283.88752arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135940859796643Rat
1331774Bp226Blood pressure QTL 2264.41065arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135940859796643Rat
1331776Bp225Blood pressure QTL 2252.829arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)183135940859796643Rat
1331798Bp224Blood pressure QTL 2243.53873arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135940859796643Rat
1331727Bp237Blood pressure QTL 2373.053arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135940861698465Rat
61429Cia17Collagen induced arthritis QTL 174.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)183135940870263868Rat
2303120Mamtr8Mammary tumor resistance QTL 80.001mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)183135940883218561Rat
6903347Bp350Blood pressure QTL 3504.4arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135953059796478Rat
631274Sprol1Serum protein level QTL 15.3blood total protein amount (VT:0005567)serum total protein level (CMO:0000661)183139332077209694Rat
631518Bw11Body weight QTL 112.8body mass (VT:0001259)body weight (CMO:0000012)183587072380870723Rat
61367Iddm4Insulin dependent diabetes mellitus QTL 42.330.0074blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)183819245583192455Rat
1598826Anxrr20Anxiety related response QTL 203.04body movement coordination trait (VT:0005424)number of rearing movements in an experimental apparatus (CMO:0001752)184143297183828827Rat
6893683Bw110Body weight QTL 1102.70.002body mass (VT:0001259)body weight (CMO:0000012)184334502283828827Rat
8694366Abfw8Abdominal fat weight QTL 86.380.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)184664067583828827Rat
8694432Bw165Body weight QTL 1653.810.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)184664067583828827Rat
9589041Epfw12Epididymal fat weight QTL 1217.080.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)184664067583828827Rat
1331806Bp229Blood pressure QTL 2294.36484arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)184671876357867167Rat
1331736Bp227Blood pressure QTL 2272.791arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)184671876359796643Rat
1331780Bp238Blood pressure QTL 2383.269arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)184671876359796643Rat
6903345Bp349Blood pressure QTL 3493.9arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)184671893559796478Rat
6903349Bp351Blood pressure QTL 3513.5arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)184671893559796478Rat
6903351Bp352Blood pressure QTL 3523.3arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)184671893559796478Rat
61360EaeyExperimental allergic encephalomyelitis QTL y3nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis duration (CMO:0001424)184698893960377753Rat
2303571Bw92Body weight QTL 923body mass (VT:0001259)body weight (CMO:0000012)184852004483828827Rat
2303584Gluco55Glucose level QTL 552blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)184852004483828827Rat
7411719Strs5Sensitivity to stroke QTL 59.4cerebrum integrity trait (VT:0010549)percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)184999995865845095Rat
2293658Bmd23Bone mineral density QTL 237.30.0001femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)185146473363636873Rat
738008Hcar14Hepatocarcinoma resistance QTL 144.3liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion number (CMO:0001462)185146473383218561Rat
1331730Scl27Serum cholesterol level QTL 273.826blood HDL cholesterol amount (VT:0000184)serum high density lipoprotein cholesterol level (CMO:0000361)185229287559796643Rat
1331752Bw27Body weight QTL 272.963body mass (VT:0001259)body weight (CMO:0000012)185229287565845095Rat
1359020Ppulsi2Prepulse inhibition QTL 22.71prepulse inhibition trait (VT:0003088)acoustic startle response measurement (CMO:0001519)185229287573997283Rat
1600375Mcs22Mammary carcinoma susceptibility QTL 223.3mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)185253976363933058Rat
631509Sald2Serum aldosterone level QTL 22.9blood aldosterone amount (VT:0005346)serum aldosterone level (CMO:0000487)185253976369140759Rat
12880368Bw187Body weight QTL 1870.045body mass (VT:0001259)body weight (CMO:0000012)185253976376104388Rat
12904067Cm122Cardiac mass QTL 1220.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)185253976376104388Rat
12904069Cm123Cardiac mass QTL 1230.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)185253976376104388Rat
12904070Cm124Cardiac mass QTL 1240.01heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)185253976376104388Rat
12904071Am18Aortic mass QTL 180.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)185253976376104388Rat
12904073Kidm71Kidney mass QTL 710.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)185253976376104388Rat
2301417Bp319Blood pressure QTL 3190.002arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)185253976376104388Rat
1300125Rf26Renal function QTL 263.2urine potassium amount (VT:0010539)urine potassium excretion rate (CMO:0000761)185253986365844950Rat
1298072Cia26Collagen induced arthritis QTL 263.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)185470976983828827Rat
631834Sach3Saccharin preference QTL 33.90.01consumption behavior trait (VT:0002069)calculated saccharin drink intake volume (CMO:0001600)185880568763636873Rat
724542Kidm2Kidney mass QTL 22.6kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)185917211583828827Rat
2312600Bp341Blood pressure QTL 3410.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)185933040970263868Rat
2301969Bp324Blood pressure QTL 3244.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)185971241776477814Rat
70185BpQTLcluster15Blood pressure QTL cluster 154.61arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)185971241776477814Rat
70185BpQTLcluster15Blood pressure QTL cluster 154.61arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)185971241776477814Rat
70185BpQTLcluster15Blood pressure QTL cluster 154.61arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)185971241776477814Rat
70185BpQTLcluster15Blood pressure QTL cluster 154.61arterial blood pressure trait (VT:2000000)absolute change in systolic blood pressure (CMO:0000607)185971241776477814Rat
1331770Bp234Blood pressure QTL 2343.807arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)185979647871893566Rat
6903353Bp353Blood pressure QTL 3532.8arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)185979647883828827Rat
6903356Bp354Blood pressure QTL 3544.6arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)185979647883828827Rat
61384Bp48Blood pressure QTL 4819.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)186062231177209844Rat
631675Iddm15Insulin dependent diabetes mellitus QTL 15urine glucose amount (VT:0001758)percentage of study population developing diabetes mellitus during a period of time (CMO:0001114)186062231177209844Rat
634333Pia19Pristane induced arthritis QTL 193.4joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)187399714079532029Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general confidence interval 0.0-87.3 Mb 8694157
qtl_general number of animals used: 93 F2 males and 94 F2 females 8694157
qtl_general software package used: MultiQTL software 8694157
qtl_general measurement method: animals were given a subcutaneous injection of (5ug/100g BW) dexamethasone after 2h blood samples were collected on EDTA, centrifuged at 4000g for 10 min to extract the plasma, plasma corticosterone was measured with an in-house RIA kit using an anti-Cort antibody 8694157
qtl_general an additional peak at D18Rat8 with confidence interval 29.7-87.3 Mb was observed 8694157