Bp48 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Bp48 (Blood pressure QTL 48) Rattus norvegicus

Symbol: Bp48
Name: Blood pressure QTL 48
RGD ID: 61384
Trait: arterial blood pressure trait   (VT:2000000)    
Measurement Type: systolic blood pressure   (CMO:0000004)    
LOD Score: 19.4
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21860,622,311 - 77,209,844RGD_MAPPER_PIPELINE
Rnor_6.01862,805,406 - 80,696,375RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01861,991,738 - 79,748,387RGDRnor5.0
RGSC_v3.41863,595,606 - 80,370,517RGDRGSC3.4
RGSC_v3.11863,714,065 - 80,444,102RGD
Cross Type: intercross
Strains Crossed: BB/OK SHR/Mol 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
hypertension  (IDA)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
BB/OK  (IEA)
SHR/Mol  (IEA)

References

References - curated
1. Kovacs P, etal., Biochem Biophys Res Commun 1997 Jun 18;235(2):343-8

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
2715GnalG protein subunit alpha L186280540662946133Rat
7743722LOC102551933protein FAM136A-like186281066862812536Rat
7694763LOC102551836uncharacterized LOC102551836186285958162876156Rat
1593500Chmp1bcharged multivesicular body protein 1B186292362062926150Rat
1309184Mppe1metallophosphoesterase 1186294695262966174Rat
628692Impa2inositol monophosphatase 2186301657763050123Rat
9196168LOC103694232uncharacterized LOC103694232186305952263065345Rat
1305106Cideacell death-inducing DFFA-like effector a186308286163108450Rat
1305887Tubb6tubulin, beta 6 class V186313054263140181Rat
1305259Afg3l2AFG3 like matrix AAA peptidase subunit 2186314141863185510Rat
9158344LOC103694268cytochrome b-c1 complex subunit 7 pseudogene186318760063188065Rat
1582858Prelid3aPRELI domain containing 3A186320260163220135Rat
11479093LOC108353173heterogeneous nuclear ribonucleoprotein A3 pseudogene186321403163218792Rat
7713488LOC102552039heterogeneous nuclear ribonucleoprotein A3-like186321776363220242Rat
7591122LOC102552125uncharacterized LOC102552125186322543163228332Rat
1305892Spire1spire-type actin nucleation factor 1186322655763357420Rat
1305183Cep76centrosomal protein 76186336499063394766Rat
1304867Psmg2proteasome assembly chaperone 2186339499163420491Rat
620710Ptpn2protein tyrosine phosphatase, non-receptor type 2186341529863489240Rat
9366255LOC103694233thymosin beta-10 pseudogene186352917263530005Rat
6490353Seh1lSEH1-like nucleoporin186354515063568101Rat
7633439LOC102552297uncharacterized LOC102552297186356258063572030Rat
1562797Cep192centrosomal protein 192186357208463656302Rat
1587105Ldlrad4low density lipoprotein receptor class A domain containing 4186371742364045224Rat
1562758RGD1562758similar to glyceraldehyde-3-phosphate dehydrogenase186382423963826908Rat
9092895LOC103694234uncharacterized LOC103694234186386192463862578Rat
9286071LOC10369426960S ribosomal protein L17 pseudogene186394310863943817Rat
7664077LOC102547804tRNA methyltransferase 112 homolog186402779264029797Rat
1359600Fam210afamily with sequence similarity 210, member A186404502364084594Rat
1309242RnmtRNA (guanine-7-) methyltransferase186408474664108246Rat
3058Mc5rmelanocortin 5 receptor186411365964118700Rat
628649Mc2rmelanocortin 2 receptor186416695964178729Rat
7616480LOC102548061uncharacterized LOC102548061186431449764333951Rat
9383011LOC103694235uncharacterized LOC103694235186436792464384328Rat
11465878LOC108348808uncharacterized LOC108348808186469154464698694Rat
11512205LOC108348809uncharacterized LOC108348809186488547964897806Rat
9174735LOC103694236uncharacterized LOC103694236186515569265174299Rat
69271Tcf4transcription factor 4186528532065507983Rat
1305212PoliDNA polymerase iota186574910765768805Rat
1595452Mbd2methyl-CpG binding domain protein 2186581402665885115Rat
1561134RGD1561134similar to goliath-related E3 ubiquitin ligase 4186610383066104697Rat
11459289LOC108348811uncharacterized LOC108348811186615284766239095Rat
9255458LOC103694238glyceraldehyde-3-phosphate dehydrogenase pseudogene186626222366263134Rat
2323104LOC100359941high mobility group protein HMG-I/HMG-Y-like186633676466337079Rat
2321355LOC100360803ribosomal protein L37-like186645291066518773Rat
2492DccDCC netrin 1 receptor186651821367629801Rat
11402245LOC108348868uncharacterized LOC108348868186684991666858346Rat
9129715LOC103694239heat shock protein HSP 90-alpha pseudogene186735889767362377Rat
1561424Ccdc68coiled-coil domain containing 68186840881268472323Rat
620114Rab27bRAB27B, member RAS oncogene family186848600668644595Rat
7516836LOC102548285uncharacterized LOC102548285186868951768693829Rat
1564477RGD1564477similar to cytoskeleton associated protein 2186870582368709926Rat
7550710Dynapdynactin associated protein186875222468755426Rat
1596811LOC680077dynactin-associated protein-like186877313368838901Rat
9159693LOC103694240uncharacterized LOC103694240186883003468838901Rat
1563837LOC361346similar to chromosome 18 open reading frame 54186895754268984087Rat
9473686LOC103694270uncharacterized LOC103694270186898265468985524Rat
1359639Stard6StAR-related lipid transfer domain containing 6186898349169004868Rat
1309023Mex3cmex-3 RNA binding family member C186954993769571736Rat
11508231LOC108353174uncharacterized LOC108353174186956098669566732Rat
3033Smad4SMAD family member 4186962668269657373Rat
7725693LOC102551612uncharacterized LOC102551612186968066169683999Rat
7724951LOC102551667uncharacterized LOC102551667186968490969689287Rat
1304757Elac1elaC ribonuclease Z 1186970652269723869Rat
1310321Me2malic enzyme 2186973751569784099Rat
9438210LOC10369427160S ribosomal protein L31 pseudogene186981605169816359Rat
1590648LOC680512similar to 60S ribosomal protein L38186981870869818986Rat
9182288LOC103694241uncharacterized LOC103694241186982053969831563Rat
1559803Mromaestro186983377069850164Rat
7617732LOC102551811uncharacterized LOC102551811186985378069863503Rat
3047Mapk4mitogen-activated protein kinase 4186989469270043634Rat
7622461LOC102551934uncharacterized LOC102551934187006121870081676Rat
11392733LOC108348860uncharacterized LOC108348860187009975270106515Rat
11435416LOC108348861glyceraldehyde-3-phosphate dehydrogenase pseudogene187017057470173056Rat
9427754LOC103694243glyceraldehyde-3-phosphate dehydrogenase pseudogene187017195370172996Rat
1310784Ska1spindle and kinetochore associated complex subunit 1187017431670184368Rat
1310755Cxxc1CXXC finger protein 1187019252070197871Rat
6485424LOC10091287840S ribosomal protein S17-like187022235570222673Rat
11462331LOC108348812uncharacterized LOC108348812187023633870241641Rat
1305980Mbd1methyl-CpG binding domain protein 1187024856870263190Rat
1306734Cfap53cilia and flagella associated protein 53187026329070330420Rat
11421033LOC108348813putative 60S ribosomal protein L37a187031325870313605Rat
1594273LOC678956similar to endothelial differentiation-related factor 1 isoform beta187041788770418581Rat
621347Myo5bmyosin Vb187042686570729985Rat
7549925LOC10255239960S ribosomal protein L23a-like187045722570462563Rat
9288448LOC103694245uncharacterized LOC103694245187047867970482322Rat
11423228LOC108348815uncharacterized LOC108348815187050307170508577Rat
9131265LOC103694244uncharacterized LOC103694244187071323270716095Rat
620482Acaa2acetyl-CoA acyltransferase 2187073387270762395Rat
7521983LOC102552501uncharacterized LOC102552501187073613270736914Rat
7499022LOC102552571uncharacterized LOC102552571187079240970794409Rat
7675035LOC102557471uncharacterized LOC102557471187079554270800575Rat
11442607LOC108348862uncharacterized LOC108348862187082805970832482Rat
1310740Lipglipase G, endothelial type187090352870924434Rat
1560896Slc25a6solute carrier family 25 member 6187095987270961040Rat
1303019Rpl17ribosomal protein L17187096973370972839Rat
1562987RGD1562987similar to cDNA sequence BC031181187097488570983362Rat
1309111Dymdymeclin187099607471313033Rat
7507860LOC102556053uncharacterized LOC102556053187139029771391740Rat
69314Smad7SMAD family member 7187139583071424164Rat
1311887Ctifcap binding complex dependent translation initiation factor187146738171701423Rat
7538513LOC102548286peroxisomal biogenesis factor 19-like187173122371733389Rat
7648927LOC102548225uncharacterized LOC102548225187188347971888859Rat
7600825LOC102556385uncharacterized LOC102556385187209341472113355Rat
1591841Zbtb7czinc finger and BTB domain containing 7C187212495572462293Rat
11501292LOC108348863uncharacterized LOC108348863187249852272501469Rat
3031Smad2SMAD family member 2187255010772612078Rat
7712575LOC10254647460S ribosomal protein L15-like187255030572558906Rat
9154410LOC103694247uncharacterized LOC103694247187265052172654364Rat
11513992LOC108353184uncharacterized LOC108353184187265517672656724Rat
7647004LOC102549578uncharacterized LOC102549578187269147472709190Rat
7699296LOC102549689uncharacterized LOC102549689187283501272840087Rat
11417529LOC108348819uncharacterized LOC108348819187294697272950458Rat
11510620LOC108348818uncharacterized LOC108348818187295176172962766Rat
1598071Skor2SKI family transcriptional corepressor 2187314559673199395Rat
1308579Hdhd2haloacid dehalogenase-like hydrolase domain containing 2187322663073278062Rat
7509218LOC102551186uncharacterized LOC102551186187323622673239331Rat
1564708Katnal2katanin catalytic subunit A1 like 2187328375673360367Rat
71056Pias2protein inhibitor of activated STAT, 2187347986373524956Rat
7732886LOC102552068uncharacterized LOC102552068187354839873574856Rat
11449165LOC108348820uncharacterized LOC108348820187355570273560769Rat
1302934St8sia5ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5187356401073630256Rat
7728601LOC102551699glyceraldehyde-3-phosphate dehydrogenase-like187359065173592290Rat
7659833LOC102551787uncharacterized LOC102551787187364465573667824Rat
1304815Loxhd1lipoxygenase homology PLAT domains 1187364536573812271Rat
1560744Rnf165ring finger protein 165187383128973873246Rat
11432148LOC108348739uncharacterized LOC108348739187395556473963676Rat
7550695LOC102551968uncharacterized LOC102551968187396834973976422Rat
11382275LOC108348821uncharacterized LOC108348821187399164873998978Rat
1308601RGD1308601similar to hypothetical protein187401296574059618Rat
9177268NEWGENE_619909HAUS augmin-like complex, subunit 1187413887974151990Rat
619909Haus1HAUS augmin-like complex, subunit 1187414075974151965Rat
619993Atp5f1aATP synthase F1 subunit alpha187415655374164490Rat
1563090Pstpip2proline-serine-threonine phosphatase-interacting protein 2187417380974291188Rat
1306286Epg5ectopic P-granules autophagy protein 5 homolog187429996574397115Rat
1565948Siglec15sialic acid binding Ig-like lectin 15187440338474417333Rat
3688Slc14a1solute carrier family 14 member 1 (Kidd blood group)187446106474504475Rat
7673145LOC102553274uncharacterized LOC102553274187448511074486471Rat
3689Slc14a2solute carrier family 14 member 2187450807074941389Rat
7644990LOC102553338uncharacterized LOC102553338187475827474789674Rat
1306229Setbp1SET binding protein 1187509073375432446Rat
7571065LOC102553440SET-binding protein-like187542824375432430Rat
7671108LOC102553546uncharacterized LOC102553546187546222775464066Rat
7508595LOC102553626uncharacterized LOC102553626187547194775479307Rat
7746354LOC102553737uncharacterized LOC102553737187554805875585542Rat
1597724LOC685159similar to ribosomal protein S18187601062576011127Rat
1565291RGD1565291similar to TGF beta-inducible nuclear protein 1 (L-name related LNR42)187603757876038285Rat
1596483LOC685213similar to muscleblind-like 3187615447376155434Rat
7727741LOC102554148uncharacterized LOC102554148187626303276281462Rat
1307398Mrps21lmitochondrial ribosomal protein S21-like187631707776317542Rat
6503656LOC100909457uncharacterized LOC100909457187633963376341273Rat
7742941LOC102554870uncharacterized LOC102554870187644354376460412Rat
6503299LOC100909499uncharacterized LOC100909499187644620276447842Rat
6493141LOC100911388SNW domain-containing protein 1-like187653764476539507Rat
1305016Pard6gpar-6 family cell polarity regulator gamma187655987776627843Rat
1308279Adnp2ADNP homeobox 2187663741576661186Rat
11438639LOC108348823uncharacterized LOC108348823187664147476647350Rat
11384962LOC108348825uncharacterized LOC108348825187668661376692507Rat
11363540LOC108348824uncharacterized LOC108348824187669093976696173Rat
11439714LOC10834874060S acidic ribosomal protein P0 pseudogene187669796376702414Rat
1587316LOC364908similar to 60S acidic ribosomal protein P0 (L10E)187670002576701700Rat
1311910Rbfaribosome binding factor A187670422376714387Rat
6492735Txnl4athioredoxin-like 4A187672522176740673Rat
1560212RGD1560212similar to DNA segment, Chr 18, Wayne State University 98, expressed187672525376731645Rat
7678438LOC102547036uncharacterized LOC102547036187673139576737262Rat
2301798Hsbp1l1heat shock factor binding protein 1-like 1187674806776754642Rat
1305223Slc66a2solute carrier family 66 member 2187676846676805773Rat
1309521Kcng2potassium voltage-gated channel modifier subfamily G member 2187680829476880742Rat
9089884LOC103694249uncharacterized LOC103694249187691991976927129Rat
1311755Ctdp1CTD phosphatase subunit 1187692291376985095Rat
11493995LOC108353175uncharacterized LOC108353175187705874077089761Rat
11412814LOC108353176uncharacterized LOC108353176187712869377141526Rat
2319357Nfatc1nuclear factor of activated T-cells 1187720351777322690Rat
1563006Atp9bATPase phospholipid transporting 9B (putative)187734355177535608Rat
11500026LOC108348826uncharacterized LOC108348826187743105177450245Rat
9305074LOC103694250uncharacterized protein CXorf67-like187755383477554513Rat
1310232Sall3spalt-like transcription factor 3187757220077591710Rat
11405714LOC108348827uncharacterized LOC108348827187759068277601682Rat
7512865LOC102548287uncharacterized LOC102548287187789929177920968Rat
11501613LOC108348828uncharacterized LOC108348828187820514178207093Rat
11478883LOC108348829uncharacterized LOC108348829187827724678278308Rat
7718722LOC102548467uncharacterized LOC102548467187827726278283477Rat
6501244LOC100909868myotilin-like187864582678647350Rat
6501465LOC100909899myotilin-like187864811178660097Rat
7609985LOC102548626uncharacterized LOC102548626187883638978850861Rat
11454712LOC108348830uncharacterized LOC108348830187886742878873055Rat
11453867LOC108348831uncharacterized LOC108348831187887277278878354Rat
7541364LOC102548779uncharacterized LOC102548779187894018078949344Rat
11357858LOC108353177uncharacterized LOC108353177187901652279038046Rat
7696337LOC102548851uncharacterized LOC102548851187905733079063623Rat
7601026LOC102548977uncharacterized LOC102548977187908718079090496Rat
7574011LOC102549036uncharacterized LOC102549036187918397479185718Rat
2656Galr1galanin receptor 1187924300979258570Rat
3054Mbpmyelin basic protein187932673879437310Rat
11459726LOC108348833uncharacterized LOC108348833187940843579413258Rat
1309670Zfp236zinc finger protein 236187944738479543271Rat
1562171RGD1562171similar to 60S ribosomal protein L9187958018479580828Rat
11468134LOC108348834uncharacterized LOC108348834187959034379590800Rat
9118324LOC103694251uncharacterized LOC103694251187963724279640084Rat
7523197LOC102552357uncharacterized LOC102552357187964335079669580Rat
11489686LOC108348835uncharacterized LOC108348835187972211979725123Rat
7554635LOC102552572uncharacterized LOC102552572187974996079768310Rat
9411526LOC103694272uncharacterized LOC103694272187976831779768976Rat
1306817Zfp516zinc finger protein 516187976838779857909Rat
7650944LOC102552643uncharacterized LOC102552643188011885480123326Rat
7738973LOC102552707uncharacterized LOC102552707188032928780347482Rat
11486830LOC108348864uncharacterized LOC108348864188048798080495802Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10667D18Mit17117186294666762946783Ratregion
33814D18Mit9180188069622680696375Ratregion
34043D18Mit16150186389747463897621Ratregion
34182D18Mgh3171186750212267502266Ratregion
34270D18Mgh6136186940468869404819Ratregion
34290D18Mgh4126187994861679948741Ratregion
34421D15Mgh10109187400440674004536Ratregion
33672D18Mit11252187833148778331730Ratregion
37514D18Rat43212186843610568436331Ratregion
37586D18Rat74172187841007578410246Ratregion
35282D18Rat5162187715130177151443Ratregion
36816D18Rat12222187194150671941739Ratregion
36954D18Rat6170187682042576820592Ratregion
37840D18Rat58202187322230173222498Ratregion
36638D18Rat14173186881939068819562Ratregion
36642D18Rat4176187911215479112323Ratregion
36763D18Rat33175187796795577968129Ratregion
36763D18Rat33175187795738777957561Ratregion
34781D18Rat7227187257679172577012Ratregion
34975D18Rat13149186852484868524999Ratregion
34993D18Rat11133187080313170803264Ratregion
35639D18Rat15171186791117567911345Ratregion
35677D18Rat10159187044681470446970Ratregion
35977D18Rat8163187169260671692768Ratregion
35977D18Rat8163187156907271569234Ratregion
39782D18Rat115153187511591775116069Ratregion
39904D18Rat78201188001207380012283Ratregion
40670D18Rat87240186536690865367133Ratregion
40682D18Rat85205186679590666796101Ratregion
40710D18Rat89219186290555962905769Ratregion
38556D18Rat54249186708877367089017Ratregion
40244D18Rat83149187102893671029080Ratregion
39098D18Rat45131187721221277212332Ratregion
39258D18Rat49148187543812675438293Ratregion
42050D18Arb5268186294658862946854Ratregion
42054D18Arb7185186542016365420329Ratregion
42883D9Rat159248186909660569096844Ratregion
41180D18Rat79139187916903679169175Ratregion
41284D18Rat86175186713763067137792Ratregion
41356D18Rat82154187301637973016546Ratregion
41404D18Rat88125186559074165590855Ratregion
40908D18Rat90234186436402464364257Ratregion
41022D18Rat81224187919338579193608Ratregion
41660D18Rat124201186655667566556881Ratregion
41736D18Rat136200187566899975669198Ratregion
41754D18Rat123149187037095470371099Ratregion
41878D18Rat121245187387570373875930Ratregion
43123D18Rat126200186891426168914460Ratregion
43125D18Rat120167187354687973547049Ratregion
45519D18Got70186188017920080179385Ratregion
45522D18Got67224188040488180405104Ratregion
45528D18Got69239188069621980696456Ratregion
45530D18Got71125187591486475914988Ratregion
45531D18Got76145187357967773579821Ratregion
45532D18Got65262187172459871724860Ratregion
45532D18Got65262187159971771599979Ratregion
45534D18Got63170186880767768807846Ratregion
45536D18Got62213186309461263094824Ratregion
45537D18Wox6166186331967863319829Ratregion
67820D18Uwm1171187247835372478527Ratregion
629590D18Hmgc1142187999942179999552Ratregion
60017D12Got44175187094718070947353Ratregion
62466D18Uia6200187957514579575348Ratregion
66578D18Mco5350187220598372206244Ratregion
66578D18Mco5350187220598372206167Ratregion
66581D18Mco7200187075107270751227Ratregion
1578815D18Chm68184187915090679151089Ratregion
1578824D18Chm67164187914698479147147Ratregion
1578833D18Chm71181187921716879217348Ratregion
1578848D18Chm64218187382014873820365Ratregion
1631045D18Got114152186803860668038757Ratregion
1578876D18Chm83199187951827179518469Ratregion
1578894D18Chm69159187915439079154548Ratregion
1578895D18Chm63185187276832872768512Ratregion
1578905D18Chm60235186957900469579238Ratregion
1578925D18Chm82158187948882279488979Ratregion
1578928D18Chm58188186683577266835959Ratregion
1578943D18Chm70167187918212379182289Ratregion
1578958D18Chm78206187934019979340404Ratregion
1578989D18Chm77203187933764979337851Ratregion
1579002D18Chm72182187922741079227591Ratregion
1579029D18Chm61133187080313270803264Ratregion
1579030D18Chm66195187912475179124952Ratregion
1579038D18Chm80186187939821179398394Ratregion
1579045D18Chm79211187939347879393688Ratregion
1579063D18Chm65249187911823679118484Ratregion
1579082D18Chm76177187930395779304133Ratregion
1579085D18Chm74190187925258479252773Ratregion
1579087D18Chm81209187946702079467228Ratregion
1579106D18Chm73192187924938579249576Ratregion
1579115D18Chm62163187180145871801620Ratregion
1579178D18Chm75177187930079279300968Ratregion
1579184D18Chm59153186762794867628100Ratregion
1579184D18Chm59153186762770667628100Ratregion
1629471D18Mco91038186447773364478770Ratregion
1640801D18Got128332186892034268920672Ratregion
1641762D18Got104137187090384270903978Ratregion
1633007D18Got119165187961071479610878Ratregion
1633167D18Got123128186713759267137719Ratregion
1639791D18Got129264186760888667609149Ratregion
1635336D5Kyo1199187341841673418614Ratregion
1636968D18M18Mit1158188056779480567951Ratregion
1637144D18Got127170186956536269565531Ratregion
1637343D18Wox26113187418528174185393Ratregion
1637343D18Wox26113187413887974138991Ratregion
5035965PMC324399P1413187261106772611479Ratregion
5036021PMC86557P1279186964347869643756Ratregion
5038748RH127310199186984963669849834Ratregion
5038782RH127329220187439669074396909Ratregion
5036195D18Wsu70e252186962674569626996Ratregion
5036581AU048500285187666886576669149Ratregion
5036727AU049012140187846795878468097Ratregion
5034005RH140999219187353122273531440Ratregion
5031430AU048350299187763365077633948Ratregion
5034163RH141608183187246236172462544Ratregion
5026314RH131736191186404516264045352Ratregion
5031694AU047461214186776435567764568Ratregion
5029133RH143646131186526424165264371Ratregion
5034678BI275599172186307519363075364Ratregion
5026816RH133642183186336501063365192Ratregion
5032195RH126471242187680545576805696Ratregion
5032237X98014122187362521873625339Ratregion
5026924RH134059194187407671674076909Ratregion
5029651BF386607150186389325963893408Ratregion
5035470BE108561160186542092765421086Ratregion
5027155RH65263127186313934763139473Ratregion
5029837BI27883398186847201268472109Ratregion
5032735RH135108215187352939873529612Ratregion
5035206BM390619166187670181876701983Ratregion
5035246AI599676155187672561376725767Ratregion
5024950Mc2r116186416727764167392Ratregion
5025196RH127384220187261183572612054Ratregion
5030495BF403346147187009818270098991Ratregion
5030525BF403782102187070261370702714Ratregion
5028019MDB065998187509429775094394Ratregion
5033359RH138542124186404085764040980Ratregion
5025526RH128663183186970681369706995Ratregion
5033633RH139541210187353013373530342Ratregion
5053499RH142684142187404399274044132Ratregion
5051593AW550622100186322764363227742Ratregion
5053779RH142846167187517084975171015Ratregion
5053851RH142887203186529132465291526Ratregion
5054053RH143003257187232853072328981Ratregion
5051919RH94734125187924408379244207Ratregion
5057434AA858489194187261122572611418Ratregion
5054521RH143272216186896715868967373Ratregion
5059540BE097236162187678867776788838Ratregion
5057616BE095707165186966764769667811Ratregion
5054819RH143443102186962765169627752Ratregion
5054835RH143452123187113734971137471Ratregion
5057918BF386306165187362768673627850Ratregion
5057940BF392934219187807576878075986Ratregion
5055157RH143638121186336647763366762Ratregion
5058788BE102437154187941063079410783Ratregion
5059574BE097318161187515113175151291Ratregion
5059596BE097391179186372898863729166Ratregion
5056647RH144499288187004440070044687Ratregion
5056845RH144614191186292125562921445Ratregion
5058152BI277637192186356752863567719Ratregion
5052673RH142200181186411495164115131Ratregion
5058914BF387226171187004244070042610Ratregion
5059714BF394247162186295278662952947Ratregion
5058224BF386846150187701587677016025Ratregion
5058276BF386932172186321215363212324Ratregion
5058312BI277908190186900790469008093Ratregion
5053161RH142489175187351492673515100Ratregion
5059098BF387492162186993745969937620Ratregion
5059160BE102916155187447729274477446Ratregion
5059188BF387606153186321295163213103Ratregion
5050190RH133913190187828272778282916Ratregion
5050412RH134041180186313997963140159Ratregion
5050800RH134265186187261796472618149Ratregion
5051244RH134522189187131279771312985Ratregion
5054459RH143236147187417835174178497Ratregion
5053333RH142588127186973969969739825Ratregion
5054629RH143334237186355304563554381Ratregion
5054755RH143406100187351549373515592Ratregion
5041806RH129069180186322835863228537Ratregion
5040834RH128510195187673127376731467Ratregion
5041114RH128670218186404660964046826Ratregion
5045088RH130977189187353263973532827Ratregion
5045104RH130986180186973874369738922Ratregion
5043906RH130297199186989480769895005Ratregion
5046202RH131617216187724514377245358Ratregion
5044728RH130770189187323691973237107Ratregion
5046322RH131686213187327740873277620Ratregion
5044300RH130523209187941016979410377Ratregion
5046564RH131826217187261842872618644Ratregion
5047432RH132324189186322729863227486Ratregion
5048890RH133165197187146495371465149Ratregion
5049390RH133453181187385860473858784Ratregion
5049390RH133453181187384473473844914Ratregion
5047018RH132087214186320345663203669Ratregion
5047122RH132146215186651845266518666Ratregion
5048464RH132919187186848316768483353Ratregion
5039980RH128019219187663751676637734Ratregion
5042314RH129363189187076220170762389Ratregion
5042534RH129492215186588495865885172Ratregion
5042546RH129499208186292494262925149Ratregion
5042572RH129515209187076210570762313Ratregion
5048604RH132999217187944757279447788Ratregion
5048664RH133034206187680848976808694Ratregion
5040114RH128097216187340993073410145Ratregion
5040176RH128133182186304748863047669Ratregion
5042614RH129541191186410510264105292Ratregion
5042100RH129239216186292494262925157Ratregion
5040458RH128295185187019755670197740Ratregion
5043124RH129846165186416426064164424Ratregion
5043172RH129873215186962677869626992Ratregion
5039856RH127946203187352606873526270Ratregion
5042370RH129395159187076223770762395Ratregion
5042646RH129559215186322767763227891Ratregion
5040520RH128330201187734421977344419Ratregion
5041318RH128788214187943705079437263Ratregion
5075114RH138406188186970427669704463Ratregion
5073832RH137664161187446122574461385Ratregion
5075318RH138525153187985586879856020Ratregion
5076368RH139135122187536552075365641Ratregion
5072664RH136981206186354187863542086Ratregion
5075292RH138510123186321985363219975Ratregion
5075304RH138517156187731241277312567Ratregion
5080586RH141665184186973378169733964Ratregion
5080684RH141722193186294713762947329Ratregion
5080706RH141734192187353836673538557Ratregion
5076046RH138947148186551169765511844Ratregion
5076120RH138991134187543029975430432Ratregion
5075164RH138435123186337194963372071Ratregion
5076730RH139345184186973563369735816Ratregion
5076808RH139390124186900967869009801Ratregion
5077770RH139949214187362496073625173Ratregion
5078348RH140289206186848612868486333Ratregion
5078572RH140421177187073040770730584Ratregion
5072968RH137158194187985764379857836Ratregion
5071138RH134908156186962232969622484Ratregion
5080542RH141640155187940808379408237Ratregion
5078868RH140598199186404998864050186Ratregion
5070670RH134637193187401320474013396Ratregion
5071504RH135120186187026136670261552Ratregion
5071674RH135219182187720374877203929Ratregion
5073878RH137691157186984114769841303Ratregion
5070938RH134793205187663677576636979Ratregion
5071154RH134918189187429264774292835Ratregion
5071154RH134918189187421468574214873Ratregion
5071372RH135044194187662954376629736Ratregion
5071458RH135094199187383143773831635Ratregion
5072400RH136827152187017453270174683Ratregion
5071802RH135293205186405243464052638Ratregion
5061700BF402482157187942285479423010Ratregion
5061794AW533548207187341191173412117Ratregion
5063336BE107548194186339476463394957Ratregion
5065076BF405689141187943394779434087Ratregion
5065106BF405832177186993757469937750Ratregion
5066798AU048144236187502270975022939Ratregion
5066822AU048130155187134752071347674Ratregion
5066864AU048105261187502271375022973Ratregion
5067914AU047460186186776434967764534Ratregion
5068538AU047085174187838609578386268Ratregion
5070235RH94550172186411632664116497Ratregion
5069104AU046722136186423290364233038Ratregion
5070406AI427432148187382636073826507Ratregion
5060196BF400698145186340139263401536Ratregion
5061934BE112163175187688133476881508Ratregion
5063522BE107748179186662000166620179Ratregion
5060628BI286279214187097086470971077Ratregion
5062224BE106373150186703000267030151Ratregion
5060730BF389035125187025002470250148Ratregion
5062576BF403438165186341337263413536Ratregion
5062778AW534410169186542167165421839Ratregion
5065328BI297035163186404839864048560Ratregion
5065360AA963895152187090191170902062Ratregion
5062448BI288878199186405138264051580Ratregion
5063982BE120364151186349007563490225Ratregion
5063990BE120385219186529315565293374Ratregion
5065698BE109662152186337827963378430Ratregion
5060920BF401382225187170650471706728Ratregion
5060920BF401382225187158160071581824Ratregion
5066030BE116587150186547432365474472Ratregion
5064536BF399308248186395377463954021Ratregion
5064834BF405190100187355977973559878Ratregion
5061516BE111942179186954660569546783Ratregion
5061662BE105775152186760266367602814Ratregion
5086877BM388257166187187141571871580Ratregion
5086100BF387725150187004750870047657Ratregion
5087078BE106956159187941541079415568Ratregion
5087205BM387980215187827733878277552Ratregion
5087340AI717058139186966258669662724Ratregion
5082983BF390562165187582654075826704Ratregion
5089843AU049396219187137147371371691Ratregion
5083193BF390958192186524439365244584Ratregion
5083339BF417987147186285588962856035Ratregion
5083439BF391242104186985775269857855Ratregion
5088831AU048796167186736234867362514Ratregion
5089609AU049257298187511587375116170Ratregion
5083976AA892769186187760143077601615Ratregion
5081669BE117956180187509448075094659Ratregion
5090165AU049589156187008009370080249Ratregion
5090235AU049630148186583296065833107Ratregion
5087574PMC324399P2500186962748469627983Ratregion
5084898AI178947204187662176376621966Ratregion
5085395BM390268190187278374372783932Ratregion
5090673AU049893216186512032365120538Ratregion
5090717AU049921182186361855363618734Ratregion
5085294BQ195828152187835573578355886Ratregion
5085314AW534258163186652066066520822Ratregion
5081320RH142092193186304970363049895Ratregion
5082699BF416672250187359924573599494Ratregion
5085830BF387441183186989692969897111Ratregion
5085978BQ204385188187219396472194151Ratregion
5085982AW529377168187757382477573991Ratregion
5080884RH141838208186588713265887339Ratregion
5082755AW520939155186757728667577440Ratregion
5082967BF390509190187776744877767637Ratregion
5086642BE115218219187678589376786111Ratregion
5081555BE117353155186895813168958285Ratregion
5083623BG38120094187396916373969256Ratregion
5086707BE107285155186582783365827986Ratregion
5081837BE118490153186706941367069565Ratregion
5503296UniSTS:237838320186551153765511856Ratregion
5503692Smad71509187139772171399229Ratregion
5504526PMC26746P1117187173230571732421Ratregion
5504526PMC26746P1117187160759471608413Ratregion
5504406PMC193708P2104187139899271399095Ratregion
5504897ha3141208187390802273908229Ratregion
5505416Pias21002187353079073531791Ratregion
5506549MADH2_1658608187261104072611647Ratregion
5506712AF010230169186963484569635013Ratregion
5506863G46819230188062431480624543Ratregion
5500167D18Mit216611188022855380229163Ratregion
5500346GDB:201899155186694626166946415Ratregion
5500891STS-Z407940186550029065500627Ratregion
5503298UniSTS:237853133187663773976637871Ratregion
5503300UniSTS:237833200186292419162924390Ratregion
5501217PMC156124P3298186313905763139354Ratregion
5501494D12S881343187700893377009275Ratregion
5501604RH36897670187182726171827930Ratregion
5505538D9S286720186933093969331658Ratregion
5506885G47243250187122943771229686Ratregion
Position Markers

Flank 1: (Gnal)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21860,622,311 - 60,762,599 (+)NCBI
Rnor_6.0 Ensembl1862,805,410 - 62,944,630 (+)Ensembl
Rnor_6.01862,805,406 - 62,946,133 (+)NCBI
Rnor_5.01861,991,738 - 62,131,420 (+)NCBI
RGSC_v3.41863,595,606 - 63,735,803 (+)NCBI
RGSC_v3.11863,668,806 - 63,809,004 (+)NCBI
Celera1858,730,137 - 58,870,361 (+)NCBI
Cytogenetic Map18q12.1NCBI
Flank 2: (D18Mit9)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21877,209,694 - 77,209,844 (+)MAPPER
Rnor_6.01880,696,226 - 80,696,375NCBI
Rnor_5.01879,748,238 - 79,748,387UniSTS
RGSC_v3.41880,370,367 - 80,370,517RGD
RGSC_v3.41880,370,368 - 80,370,517UniSTS
RGSC_v3.11880,443,810 - 80,444,102RGD
Celera1875,835,913 - 75,836,062UniSTS
RH 3.4 Map18814.4UniSTS
RH 3.4 Map18814.4RGD
RH 2.0 Map1853.0RGD
SHRSP x BN Map1849.0499RGD
FHH x ACI Map1860.7699RGD
Cytogenetic Map7q36UniSTS


QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2293708Bss46Bone structure and strength QTL 468.80.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)181569587268524999Rat
1578661Bss20Bone structure and strength QTL 203.7femur morphology trait (VT:0000559)femoral neck cross-sectional area (CMO:0001697)181569587287080053Rat
1578667Bss21Bone structure and strength QTL 213.5femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)181569587287080053Rat
1358193Emca2Estrogen-induced mammary cancer QTL 21.6mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)181903103068436105Rat
1600373Mamtr6Mammary tumor resistance QTL 6mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)182028575887080053Rat
7387267Uae42Urinary albumin excretion QTL 420.61urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)142163949166639491Rat
1331741Bp232Blood pressure QTL 2323.59112arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)182260373687074531Rat
1331733Bp233Blood pressure QTL 2333.97196arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182596102681761656Rat
2300157Bmd66Bone mineral density QTL 6613.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)183053361475533614Rat
2300177Bmd65Bone mineral density QTL 6519.70.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)183053361475533614Rat
2293704Bss35Bone structure and strength QTL 354.590.0002femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)183053361475533614Rat
9590318Scort22Serum corticosterone level QTL 227.640.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)183136134176361341Rat
1331754Bp230Blood pressure QTL 2304.61609arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183136134176361341Rat
9589816Gluco68Glucose level QTL 687.250.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)183136134176361341Rat
8694378Bw157Body weight QTL 1573.590.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)183136134176361341Rat
738005Anxrr11Anxiety related response QTL 113.4exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)183160842476608424Rat
1331727Bp237Blood pressure QTL 2373.053arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183267035263897621Rat
61429Cia17Collagen induced arthritis QTL 174.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)183267035273016546Rat
2303120Mamtr8Mammary tumor resistance QTL 80.001mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)183267035287080053Rat
631274Sprol1Serum protein level QTL 15.3blood total protein amount (VT:0005567)serum total protein level (CMO:0000661)183270402280696226Rat
631518Bw11Body weight QTL 112.8body mass (VT:0001259)body weight (CMO:0000012)183822191983221919Rat
61367Iddm4Insulin dependent diabetes mellitus QTL 42.330.0074blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)184037576985375769Rat
6893683Bw110Body weight QTL 1102.70.002body mass (VT:0001259)body weight (CMO:0000012)184500219488201929Rat
1598826Anxrr20Anxiety related response QTL 203.04body movement coordination trait (VT:0005424)number of rearing movements in an experimental apparatus (CMO:0001752)184631947688201929Rat
9589041Epfw12Epididymal fat weight QTL 1217.080.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)184913092088201929Rat
8694432Bw165Body weight QTL 1653.810.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)184913092088201929Rat
8694366Abfw8Abdominal fat weight QTL 86.380.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)184913092088201929Rat
2303571Bw92Body weight QTL 923body mass (VT:0001259)body weight (CMO:0000012)185137581688201929Rat
2303584Gluco55Glucose level QTL 552blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)185137581688201929Rat
7411719Strs5Sensitivity to stroke QTL 59.4cerebrum integrity trait (VT:0010549)percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)185160903267502266Rat
2293658Bmd23Bone mineral density QTL 237.30.0001femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)185303349468524999Rat
738008Hcar14Hepatocarcinoma resistance QTL 144.3liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion number (CMO:0001462)185303349487080053Rat
1331752Bw27Body weight QTL 272.963body mass (VT:0001259)body weight (CMO:0000012)185386125267502266Rat
1359020Ppulsi2Prepulse inhibition QTL 22.71prepulse inhibition trait (VT:0003088)acoustic startle response measurement (CMO:0001519)185386125277151443Rat
1600375Mcs22Mammary carcinoma susceptibility QTL 223.3mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)185410837568819562Rat
631509Sald2Serum aldosterone level QTL 22.9blood aldosterone amount (VT:0005346)serum aldosterone level (CMO:0000487)185410837571692768Rat
2301417Bp319Blood pressure QTL 3190.002arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)185410837579575348Rat
12880368Bw187Body weight QTL 1870.045body mass (VT:0001259)body weight (CMO:0000012)185410837579575348Rat
12904067Cm122Cardiac mass QTL 1220.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)185410837579575348Rat
12904069Cm123Cardiac mass QTL 1230.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)185410837579575348Rat
12904070Cm124Cardiac mass QTL 1240.01heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)185410837579575348Rat
12904071Am18Aortic mass QTL 180.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)185410837579575348Rat
12904073Kidm71Kidney mass QTL 710.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)185410837579575348Rat
1300125Rf26Renal function QTL 263.2urine potassium amount (VT:0010539)urine potassium excretion rate (CMO:0000761)185410847467502122Rat
1558649Bw58Body weight QTL 583.40.0005body mass (VT:0001259)body weight (CMO:0000012)185744867888201929Rat
6893359Bw103Body weight QTL 1031.20.12body mass (VT:0001259)body weight (CMO:0000012)185744867888201929Rat
6893368Bw107Body weight QTL 1070.30.5body mass (VT:0001259)body weight (CMO:0000012)185744867888201929Rat
1298072Cia26Collagen induced arthritis QTL 263.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)185819630088201929Rat
631834Sach3Saccharin preference QTL 33.90.01consumption behavior trait (VT:0002069)calculated saccharin drink intake volume (CMO:0001600)186097150868524999Rat
2312600Bp341Blood pressure QTL 3410.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)186149953173016546Rat
70185BpQTLcluster15Blood pressure QTL cluster 154.61arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)186190135479948616Rat
70185BpQTLcluster15Blood pressure QTL cluster 154.61arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)186190135479948616Rat
70185BpQTLcluster15Blood pressure QTL cluster 154.61arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)186190135479948616Rat
70185BpQTLcluster15Blood pressure QTL cluster 154.61arterial blood pressure trait (VT:2000000)absolute change in systolic blood pressure (CMO:0000607)186190135479948616Rat
2301969Bp324Blood pressure QTL 3244.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)186190135479948616Rat
1331770Bp234Blood pressure QTL 2343.807arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)186198564873018740Rat
6903356Bp354Blood pressure QTL 3544.6arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)186198564888201929Rat
631675Iddm15Insulin dependent diabetes mellitus QTL 15urine glucose amount (VT:0001758)percentage of study population developing diabetes mellitus during a period of time (CMO:0001114)186280540680696375Rat
61384Bp48Blood pressure QTL 4819.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)186280540680696375Rat
724542Kidm2Kidney mass QTL 22.6kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)186300981288201929Rat
634333Pia19Pristane induced arthritis QTL 193.4joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)187715130183366399Rat
70172Eae15Experimental allergic encephalomyelitis QTL 150.001nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)187994861680696375Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Bp48

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general linked to the albumin and phosphate excretion 61055