Anxrr11 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Anxrr11 (Anxiety related response QTL 11) Rattus norvegicus

Symbol: Anxrr11
Name: Anxiety related response QTL 11
RGD ID: 738005
Previously known as: Arr11; Entries into closed fields; Ec
Trait: exploratory behavior trait   (VT:0010471)    
Measurement Type: number of entries into a discrete space in an experimental apparatus   (CMO:0000960)    
LOD Score: 3.4
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21830,039,813 - 75,039,813RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01831,608,424 - 76,608,424RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01830,846,397 - 75,846,397RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41832,356,601 - 77,356,601RGD_MAPPER_PIPELINERGSC3.4
RGSC_v3.11832,428,833 - 77,428,833RGD
Cross Type: intercross
Strains Crossed: SHR/Ola BN-Lx/Cub 




  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Anxrr11Ratanxiety disorder  IAGP 737695 RGD 
Anxrr11RatHyperkinesis  IDA 737695 RGD 

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Anxrr11Rathyperactivity  IAGP 737695 RGD 

Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Anxrr11Ratnumber of entries into a discrete space in an experimental apparatus  IDA 737695unpromptedRGD 

Experimental Condition
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Anxrr11Ratcontrol condition  IDA 737695 RGD 

Measurement Method
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Anxrr11Ratenclosed arm of elevated plus maze apparatus  IDA 737695 RGD 

Rat Strain
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Anxrr11RatBN-Lx/Cub  IEA 737695 RGD 
Anxrr11RatSHR/Ola  IEA 737695 RGD 

Vertebrate Trait
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Anxrr11Ratexploratory behavior trait  IDA 737695 RGD 


#
Reference Title
Reference Citation
1. Identification of quantitative trait Loci for anxiety and locomotion phenotypes in rat recombinant inbred strains. Conti LH, etal., Behav Genet 2004 Jan;34(1):93-103.

Related QTL Description Reference
Anxrr9 interacts with RGD:737695
Anxrr8 interacts with RGD:737695
Anxrr3 interacts with RGD:737695
Anxrr10 interacts with RGD:737695
Anxrr4 interacts with RGD:737695
Anxrr5 interacts with RGD:737695
Anxrr6 interacts with RGD:737695
Anxrr7 interacts with RGD:737695



1 to 20 of 546 rows
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
735029Dele1DAP3 binding cell death enhancer 1183008509330098105Rat
619917Pcdh12protocadherin 12183010372830119307Rat
1589576Rnf14ring finger protein 14183013162730155686Rat
40969390LOC120098448U6 spliceosomal RNA183013293230133034Rat
1585624Gnpda1glucosamine-6-phosphate deaminase 1183016543530177462Rat
41320469LOC120098124uncharacterized LOC120098124183024868730258445Rat
1310053Ndfip1Nedd4 family interacting protein 1183026580830316068Rat
41236582Rpl34-ps10ribosomal protein L34, pseudogene 10183028140630281757Rat
41302367LOC120098127uncharacterized LOC120098127183035758630383465Rat
1305324Spry4sprouty RTK signaling antagonist 4183043651330451426Rat
2605Fgf1fibroblast growth factor 1183068655530772667Rat
41167718LOC120098315uncharacterized LOC120098315183074279630779070Rat
1310923Arhgap26Rho GTPase activating protein 26183083580631237945Rat
41328206Cox7c-ps2Cytochrome c oxidase subunit 7C, pseudogene 2183094480030944969Rat
41402961LOC120098335uncharacterized LOC120098335183108878631096355Rat
6493059LOC100911367uncharacterized LOC100911367183123627731252492Rat
2741Nr3c1nuclear receptor subfamily 3, group C, member 1183127168131393320Rat
1310759Pabpc2poly(A) binding protein, cytoplasmic 2183165421831656486Rat
11361905LOC108348849glyceraldehyde-3-phosphate dehydrogenase pseudogene183189817631899193Rat
1359165Yipf5Yip1 domain family, member 5183212381432136947Rat

1 to 20 of 546 rows
1 to 20 of 743 rows
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Expected Size
Chr
Start
Stop
Species
Match
37910D18Rat71122183007625430076376Ratregion
5043670RH130159206183009024430090450Ratregion
5050926RH134338193183009776530097958Ratregion
5080812RH141797202183010257930102781Ratregion
5082701BF416696114183015187630151990Ratregion
5025252RH127602204183015523530155439Ratregion
5043158RH129865217183015531730155534Ratregion
5073876RH137690120183015762030157740Ratregion
1631508D18Got100125183016091330161038Ratregion
39294D18Rat51173183024674330246916Ratregion
5030873BF399066227183031693830317165Ratregion
35491D18Rat22119183041899130419110Ratregion
5079480RH141022166183043666030436826Ratregion
5076476RH139197153183049247130492624Ratregion
43117D18Rat129225183051257930512804Ratregion
40782D18Rat99179183055852430558703Ratregion
5066284PMC137013P1203183065723230657435Ratregion
5071412RH135067194183068667330686867Ratregion
5070299RH94587153183068935130689504Ratregion
5087520PMC26870P1282183068946030689742Ratregion
1 to 20 of 743 rows

Peak: (D18Rat55)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21852,539,763 - 52,539,863 (+)MAPPER
Rnor_6.01854,108,375 - 54,108,474NCBI
Rnor_5.01853,346,348 - 53,346,447UniSTS
RGSC_v3.41854,856,552 - 54,856,651UniSTS
RGSC_v3.41854,856,551 - 54,856,651RGD
RGSC_v3.11854,928,784 - 54,928,883RGD
Celera1850,643,852 - 50,643,951UniSTS
RH 3.4 Map18497.9RGD
RH 3.4 Map18497.9UniSTS
RH 2.0 Map18411.9RGD
SHRSP x BN Map1822.7899RGD
FHH x ACI Map1831.46RGD
Cytogenetic Map18q12.1UniSTS


1 to 10 of 95 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1331733Bp233Blood pressure QTL 2333.97196arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182479697779788953Rat
1358358Sradr6Stress Responsive Adrenal Weight QTL 62.49adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)181194429959330563Rat
1331735Rf44Renal function QTL 442.981urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)181823456431359530Rat
1331730Scl27Serum cholesterol level QTL 273.826blood HDL cholesterol amount (VT:0000184)serum high density lipoprotein cholesterol level (CMO:0000361)185229287559796643Rat
1331741Bp232Blood pressure QTL 2323.59112arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)182137289383213037Rat
1331742Bp228Blood pressure QTL 2283.88752arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135940859796643Rat
1298072Cia26Collagen induced arthritis QTL 263.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)185470976983828827Rat
1331736Bp227Blood pressure QTL 2272.791arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)184671876359796643Rat
1300125Rf26Renal function QTL 263.2urine potassium amount (VT:0010539)urine potassium excretion rate (CMO:0000761)185253986365844950Rat
631834Sach3Saccharin preference QTL 33.90.01consumption behavior trait (VT:0002069)calculated saccharin drink intake volume (CMO:0001600)185880568763636873Rat

1 to 10 of 95 rows


Database
Acc Id
Source(s)
NCBI Gene Anxrr11


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2006-04-14 Anxrr11  Anxiety related response QTL 11  Arr11    Symbol updated 1299863 APPROVED

Note Type Note Reference
qtl_cross_pair SHR/OlaxBN-Lx/Cub  
qtl_cross_type intercross  
qtl_map peak occurs at 40 cM; 95% confidence intervals from 36-44 cM 737695