Pou4f3 (POU class 4 homeobox 3) - Rat Genome Database

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Gene: Pou4f3 (POU class 4 homeobox 3) Rattus norvegicus
Analyze
Symbol: Pou4f3
Name: POU class 4 homeobox 3
RGD ID: 1310459
Description: Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to act upstream of or within several processes, including nervous system development; neuromuscular process controlling balance; and sensory perception of sound. Predicted to be located in cytoplasm and nucleoplasm. Human ortholog(s) of this gene implicated in autosomal dominant nonsyndromic deafness 15. Orthologous to human POU4F3 (POU class 4 homeobox 3); INTERACTS WITH bisphenol A; 2,3,7,8-tetrachlorodibenzodioxine (ortholog); aflatoxin B1 (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC364855; POU domain, class 4, transcription factor 3
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81834,641,191 - 34,643,783 (+)NCBIGRCr8
mRatBN7.21834,390,205 - 34,392,797 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1834,390,205 - 34,392,797 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1834,494,376 - 34,496,968 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01835,212,696 - 35,215,288 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01834,589,597 - 34,592,189 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01836,713,869 - 36,716,461 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1836,713,869 - 36,716,461 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01836,378,513 - 36,381,105 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41835,600,462 - 35,603,054 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11835,635,727 - 35,637,065 (+)NCBI
Celera1833,986,853 - 33,989,445 (+)NCBICelera
Cytogenetic Map18p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Comprehensive gene review and curation RGD comprehensive gene curation
8. Mutation in transcription factor POU4F3 associated with inherited progressive hearing loss in humans. Vahava O, etal., Science. 1998 Mar 20;279(5358):1950-4.
Additional References at PubMed
PMID:7623109   PMID:7935408   PMID:8290353   PMID:8637595   PMID:9256502   PMID:9735355   PMID:11807038   PMID:12585968   PMID:15465029   PMID:23805044   PMID:25372459   PMID:28790396  


Genomics

Comparative Map Data
Pou4f3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81834,641,191 - 34,643,783 (+)NCBIGRCr8
mRatBN7.21834,390,205 - 34,392,797 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1834,390,205 - 34,392,797 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1834,494,376 - 34,496,968 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01835,212,696 - 35,215,288 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01834,589,597 - 34,592,189 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01836,713,869 - 36,716,461 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1836,713,869 - 36,716,461 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01836,378,513 - 36,381,105 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41835,600,462 - 35,603,054 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11835,635,727 - 35,637,065 (+)NCBI
Celera1833,986,853 - 33,989,445 (+)NCBICelera
Cytogenetic Map18p11NCBI
POU4F3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385146,338,839 - 146,341,728 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5146,338,839 - 146,341,728 (+)EnsemblGRCh38hg38GRCh38
GRCh375145,718,402 - 145,721,291 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 365145,698,869 - 145,700,200 (+)NCBINCBI36Build 36hg18NCBI36
Build 345145,698,868 - 145,700,200NCBI
Celera5141,798,516 - 141,800,012 (+)NCBICelera
Cytogenetic Map5q32NCBI
HuRef5140,865,275 - 140,866,771 (+)NCBIHuRef
CHM1_15145,151,269 - 145,152,765 (+)NCBICHM1_1
T2T-CHM13v2.05146,874,404 - 146,877,293 (+)NCBIT2T-CHM13v2.0
Pou4f3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391842,527,662 - 42,529,158 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1842,527,604 - 42,530,314 (+)EnsemblGRCm39 Ensembl
GRCm381842,394,597 - 42,396,093 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1842,394,539 - 42,397,249 (+)EnsemblGRCm38mm10GRCm38
MGSCv371842,554,251 - 42,555,747 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361842,520,616 - 42,521,983 (+)NCBIMGSCv36mm8
Celera1843,756,095 - 43,757,583 (+)NCBICelera
Cytogenetic Map18B3NCBI
cM Map1822.58NCBI
Pou4f3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554157,777,114 - 7,778,622 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554157,777,296 - 7,778,622 (-)NCBIChiLan1.0ChiLan1.0
POU4F3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24141,590,020 - 141,593,050 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15139,729,571 - 139,732,601 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05141,786,048 - 141,789,078 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15147,800,924 - 147,802,420 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5147,800,924 - 147,802,420 (+)Ensemblpanpan1.1panPan2
POU4F3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1240,762,499 - 40,764,131 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl240,762,477 - 40,765,161 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha237,806,385 - 37,807,718 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0241,220,849 - 41,222,182 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl241,220,849 - 41,222,182 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1238,292,452 - 38,293,785 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0239,102,291 - 39,103,624 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0239,927,685 - 39,929,018 (+)NCBIUU_Cfam_GSD_1.0
Pou4f3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213146,774,487 - 146,777,274 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365048,348,398 - 8,351,804 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365048,348,460 - 8,351,246 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
POU4F3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2147,692,751 - 147,695,346 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12147,693,013 - 147,694,345 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22154,124,728 - 154,126,059 (+)NCBISscrofa10.2Sscrofa10.2susScr3
POU4F3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12348,915,247 - 48,920,163 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2348,917,217 - 48,918,548 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603428,870,406 - 28,873,294 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pou4f3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247745,821,024 - 5,822,351 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247745,821,024 - 5,822,351 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Pou4f3
5 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:163
Count of miRNA genes:118
Interacting mature miRNAs:145
Transcripts:ENSRNOT00000025465
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61388Bp2Blood pressure QTL 23.23arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)18135374722Rat
9589153Insul31Insulin level QTL 317.150.05blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)18142547119Rat
2299160Iddm35Insulin dependent diabetes mellitus QTL 352.79blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)18420794160377792Rat
2312568Glom21Glomerulus QTL 2120.005kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)18518585840503530Rat
2293708Bss46Bone structure and strength QTL 468.80.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)181179151863636873Rat
1578661Bss20Bone structure and strength QTL 203.7femur morphology trait (VT:0000559)femoral neck cross-sectional area (CMO:0001697)181179151883218561Rat
1578667Bss21Bone structure and strength QTL 213.5femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)181179151883218561Rat
61375Bp41Blood pressure QTL 412.4blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)181194429941122201Rat
1331753Bp231Blood pressure QTL 2313.643arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)181194429952293055Rat
1358358Sradr6Stress Responsive Adrenal Weight QTL 62.49adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)181194429959330563Rat
6903359Bp355Blood pressure QTL 3553.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)181194454459796478Rat
2313082Bss85Bone structure and strength QTL 850.80.0001long bone metaphysis morphology trait (VT:0000133)tibia midshaft total cross-sectional area (CMO:0001715)181495133759951337Rat
1358193Emca2Estrogen-induced mammary cancer QTL 21.6mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)181800759963571040Rat
1600373Mamtr6Mammary tumor resistance QTL 6mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)181927890183218561Rat
1331741Bp232Blood pressure QTL 2323.59112arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)182137289383213037Rat
1641923Colcr8Colorectal carcinoma resistance QTL 83.10.0014intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor number (CMO:0002076)182206624252293055Rat
1331733Bp233Blood pressure QTL 2333.97196arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182479697779788953Rat
2325839Bp348Blood pressure QTL 3480.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182557098570570985Rat
12904673Cm127Cardiac mass QTL 1270.005heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)182654808246969551Rat
12904675Am19Aortic mass QTL 190.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)182654808246969551Rat
12904677Kidm72Kidney mass QTL 720.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)182654808246969551Rat
12904668Bw188Body weight QTL 1880.03body mass (VT:0001259)body weight (CMO:0000012)182654808246969551Rat
12904669Cm125Cardiac mass QTL 1250.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)182654808246969551Rat
12904670Cm126Cardiac mass QTL 1260.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)182654808246969551Rat
2301413Bp318Blood pressure QTL 3180.002arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182654808246969551Rat
2293704Bss35Bone structure and strength QTL 354.590.0002femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)182896485373964853Rat
2300157Bmd66Bone mineral density QTL 6613.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)182896485373964853Rat
2300177Bmd65Bone mineral density QTL 6519.70.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)182896485373964853Rat
9589816Gluco68Glucose level QTL 687.250.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)182979296574792965Rat
8694378Bw157Body weight QTL 1573.590.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)182979296574792965Rat
9590318Scort22Serum corticosterone level QTL 227.640.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)182979296574792965Rat
1331754Bp230Blood pressure QTL 2304.61609arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182979296574792965Rat
738005Anxrr11Anxiety related response QTL 113.4exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)183003981375039813Rat
61383Bp47Blood pressure QTL 4717.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)183127168160377755Rat
1331742Bp228Blood pressure QTL 2283.88752arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135940859796643Rat
1331774Bp226Blood pressure QTL 2264.41065arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135940859796643Rat
1331776Bp225Blood pressure QTL 2252.829arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)183135940859796643Rat
1331798Bp224Blood pressure QTL 2243.53873arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135940859796643Rat
1331727Bp237Blood pressure QTL 2373.053arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135940861698465Rat
61429Cia17Collagen induced arthritis QTL 174.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)183135940870263868Rat
2303120Mamtr8Mammary tumor resistance QTL 80.001mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)183135940883218561Rat
6903347Bp350Blood pressure QTL 3504.4arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135953059796478Rat
631274Sprol1Serum protein level QTL 15.3blood total protein amount (VT:0005567)serum total protein level (CMO:0000661)183139332077209694Rat

Markers in Region
PMC125354P3  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21834,390,664 - 34,390,894 (+)MAPPERmRatBN7.2
Rnor_6.01836,714,329 - 36,714,558NCBIRnor6.0
Rnor_5.01836,378,973 - 36,379,202UniSTSRnor5.0
RGSC_v3.41835,600,922 - 35,601,151UniSTSRGSC3.4
Celera1833,987,313 - 33,987,542UniSTS
Cytogenetic Map18p11UniSTS
UniSTS:491575  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21834,390,158 - 34,391,625 (+)MAPPERmRatBN7.2
Rnor_6.01836,713,823 - 36,715,289NCBIRnor6.0
Rnor_5.01836,378,467 - 36,379,933UniSTSRnor5.0
RGSC_v3.41835,600,416 - 35,601,882UniSTSRGSC3.4
Celera1833,986,807 - 33,988,273UniSTS
Cytogenetic Map18p11UniSTS
Pou4f3  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21834,390,251 - 34,391,124 (+)MAPPERmRatBN7.2
Rnor_6.01836,713,916 - 36,714,788NCBIRnor6.0
Rnor_5.01836,378,560 - 36,379,432UniSTSRnor5.0
RGSC_v3.41835,600,509 - 35,601,381UniSTSRGSC3.4
Celera1833,986,900 - 33,987,772UniSTS
Cytogenetic Map18p11UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

nervous system reproductive system
High
Medium 4
Low 17
Below cutoff 32 6

Sequence


RefSeq Acc Id: ENSRNOT00000025465   ⟹   ENSRNOP00000025465
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1834,390,205 - 34,392,797 (+)Ensembl
Rnor_6.0 Ensembl1836,713,869 - 36,716,461 (+)Ensembl
RefSeq Acc Id: NM_001108889   ⟹   NP_001102359
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81834,641,191 - 34,643,783 (+)NCBI
mRatBN7.21834,390,205 - 34,392,797 (+)NCBI
Rnor_6.01836,713,869 - 36,716,461 (+)NCBI
Rnor_5.01836,378,513 - 36,381,105 (+)NCBI
RGSC_v3.41835,600,462 - 35,603,054 (+)RGD
Celera1833,986,853 - 33,989,445 (+)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001102359 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein D3ZTL1 (Get FASTA)   NCBI Sequence Viewer  
  EDL76485 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000025465
  ENSRNOP00000025465.4
  ENSRNOP00055025532
  ENSRNOP00060015018
  ENSRNOP00065026283
RefSeq Acc Id: NP_001102359   ⟸   NM_001108889
- UniProtKB: D3ZTL1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000025465   ⟸   ENSRNOT00000025465
Protein Domains
POU-specific

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZTL1-F1-model_v2 AlphaFold D3ZTL1 1-338 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1310459 AgrOrtholog
BioCyc Gene G2FUF-7698 BioCyc
Ensembl Genes ENSRNOG00000018842 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
  ENSRNOG00055018577 UniProtKB/Swiss-Prot
  ENSRNOG00060011350 UniProtKB/Swiss-Prot
  ENSRNOG00065019517 UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000025465 ENTREZGENE
  ENSRNOT00000025465.5 UniProtKB/Swiss-Prot
  ENSRNOT00055031599 UniProtKB/Swiss-Prot
  ENSRNOT00060019198 UniProtKB/Swiss-Prot
  ENSRNOT00065032886 UniProtKB/Swiss-Prot
Gene3D-CATH 1.10.260.40 UniProtKB/Swiss-Prot
  Homeodomain-like UniProtKB/Swiss-Prot
InterPro Homeobox-like_sf UniProtKB/Swiss-Prot
  Homeobox_CS UniProtKB/Swiss-Prot
  Homeobox_dom UniProtKB/Swiss-Prot
  Lambda_DNA-bd_dom_sf UniProtKB/Swiss-Prot
  POU UniProtKB/Swiss-Prot
  POU_dom UniProtKB/Swiss-Prot
KEGG Report rno:364855 UniProtKB/Swiss-Prot
NCBI Gene 364855 ENTREZGENE
PANTHER POU DOMAIN UniProtKB/Swiss-Prot
  PTHR11636:SF43 UniProtKB/Swiss-Prot
Pfam Homeodomain UniProtKB/Swiss-Prot
  Pou UniProtKB/Swiss-Prot
PhenoGen Pou4f3 PhenoGen
PRINTS POUDOMAIN UniProtKB/Swiss-Prot
PROSITE HOMEOBOX_1 UniProtKB/Swiss-Prot
  HOMEOBOX_2 UniProtKB/Swiss-Prot
  POU_1 UniProtKB/Swiss-Prot
  POU_2 UniProtKB/Swiss-Prot
  POU_3 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000018842 RatGTEx
  ENSRNOG00055018577 RatGTEx
  ENSRNOG00060011350 RatGTEx
  ENSRNOG00065019517 RatGTEx
SMART HOX UniProtKB/Swiss-Prot
  POU UniProtKB/Swiss-Prot
Superfamily-SCOP SSF46689 UniProtKB/Swiss-Prot
  SSF47413 UniProtKB/Swiss-Prot
UniProt D3ZTL1 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-09-24 Pou4f3  POU class 4 homeobox 3  Pou4f3  POU domain, class 4, transcription factor 3   Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Pou4f3  POU domain, class 4, transcription factor 3   Pou4f3_predicted  POU domain, class 4, transcription factor 3 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Pou4f3_predicted  POU domain, class 4, transcription factor 3 (predicted)      Symbol and Name status set to approved 70820 APPROVED