Gene: Pqlc1 (PQ loop repeat containing 1) Rattus norvegicus
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Symbol: Pqlc1
Name: PQ loop repeat containing 1
Description: Predicted to be involved in phospholipid translocation and retrograde transport, endosome to Golgi; predicted to localize to the endosome and trans-Golgi network; orthologous to human PQLC1 (PQ loop repeat containing 1); INTERACTS WITH (RS)-amphetamine; 2,3,7,8-tetrachlorodibenzodioxine; 5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC361352; PQ-loop repeat-containing protein 1
Orthologs:
Homo sapiens (human) : SLC66A2 (solute carrier family 66 member 2)  HGNC  Alliance
Mus musculus (house mouse) : Pqlc1 (PQ loop repeat containing 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Slc66a2 (solute carrier family 66 member 2)
Pan paniscus (bonobo/pygmy chimpanzee) : SLC66A2 (solute carrier family 66 member 2)
Canis lupus familiaris (dog) : SLC66A2 (solute carrier family 66 member 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Slc66a2 (solute carrier family 66 member 2)
Sus scrofa (pig) : SLC66A2 (solute carrier family 66 member 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01876,768,466 - 76,805,773 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01872,002,639 - 72,040,511 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41877,151,194 - 77,187,603 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11877,224,466 - 77,260,874 (+)NCBI
Celera1872,366,086 - 72,401,733 (+)NCBICelera
Cytogenetic Map18q12.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Pqlc1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1305223
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.