MARC_12115-12116:1004707389:1 Marker Search Result - Rat Genome Database

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Marker: MARC_12115-12116:1004707389:1

Symbol: MARC_12115-12116:1004707389:1
Previously known as:
RGD ID: 5501778
Expected Size: 117 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21854,589,055 - 54,589,477 (+)MAPPERmRatBN7.2
Rnor_6.01856,456,941 - 56,457,362NCBIRnor6.0
Rnor_5.01855,687,938 - 55,688,359UniSTSRnor5.0
RGSC_v3.41857,105,936 - 57,106,357UniSTSRGSC3.4
Celera1852,741,377 - 52,741,798UniSTS
Cytogenetic Map18q12.1UniSTS
Is Marker For: Genes:   Csf1r  




#
Reference Title
Reference Citation
1. UniSTS Pipeline RGD automated pipelines


 
Forward Primer GCTGGTGAAGGATGGATACC
Reverse Primer ATCTGCTGGAAGGTGGGTCT
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
2425Csf1rcolony stimulating factor 1 receptor185454667354590418Rat
RefSeq Transcripts NM_001029901 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide BV105156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 62 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1331733Bp233Blood pressure QTL 2333.97196arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182479697779788953Rat
1358358Sradr6Stress Responsive Adrenal Weight QTL 62.49adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)181194429959330563Rat
1331730Scl27Serum cholesterol level QTL 273.826blood HDL cholesterol amount (VT:0000184)serum high density lipoprotein cholesterol level (CMO:0000361)185229287559796643Rat
1331741Bp232Blood pressure QTL 2323.59112arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)182137289383213037Rat
1331742Bp228Blood pressure QTL 2283.88752arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135940859796643Rat
1331736Bp227Blood pressure QTL 2272.791arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)184671876359796643Rat
1300125Rf26Renal function QTL 263.2urine potassium amount (VT:0010539)urine potassium excretion rate (CMO:0000761)185253986365844950Rat
6893683Bw110Body weight QTL 1102.70.002body mass (VT:0001259)body weight (CMO:0000012)184334502283828827Rat
1331727Bp237Blood pressure QTL 2373.053arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135940861698465Rat
9589041Epfw12Epididymal fat weight QTL 1217.080.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)184664067583828827Rat

1 to 10 of 62 rows


Database
Acc Id
Source(s)
NCBI Gene 307403 UniSTS