Bp341 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Bp341 (Blood pressure QTL 341) Rattus norvegicus

Symbol: Bp341
Name: Blood pressure QTL 341
RGD ID: 2312600
Previously known as: Blood Pressure QTL
Trait: arterial blood pressure trait   (VT:2000000)    
Measurement Type: systolic blood pressure   (CMO:0000004)    
LOD Score: Not Available
P Value: 0.05
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21859,330,409 - 70,263,868RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01861,499,531 - 73,016,546RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01860,695,794 - 72,695,235RGDRnor5.0
RGSC_v3.41862,106,066 - 73,666,623RGDRGSC3.4
Cross Type: Not Available
Strains Crossed: SHR.BN-(D18Rat40-D18Rat82)/Ipcv 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
hypertension  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
# Reference Title Reference Citation
1. Dissection of chromosome 18 blood pressure and salt-sensitivity quantitative trait loci in the spontaneously hypertensive rat. Johnson MD, etal., Hypertension. 2009 Sep;54(3):639-45. Epub 2009 Jul 20.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
628665Sec11cSEC11 homolog C, signal peptidase complex subunit185932093259337272Rat
621740Grpgastrin releasing peptide185938867959402061Rat
620371Raxretina and anterior neural fold homeobox185946334759467469Rat
1307643Cplx4complexin 4185948136059504716Rat
71020Lman1lectin, mannose-binding, 1185950899659530873Rat
1307670Ccbe1collagen and calcium binding EGF domains 1185957985159823977Rat
11465729LOC108348805uncharacterized LOC108348805185982392859852542Rat
6488390Txnl4a-ps9thioredoxin-like 4A, pseudogene 9185987908759925914Rat
2321524Trappc6b-ps1trafficking protein particle complex subunit 6B, pseudogene 1185994739559948031Rat
1594572Rpl18-ps7ribosomal protein L18, pseudogene 7185996343659964074Rat
1359266Pmaip1phorbol-12-myristate-13-acetate-induced protein 1185998602059992434Rat
7567679LOC102551356uncharacterized LOC102551356186002982260038450Rat
41321002LOC120098399small nucleolar RNA SNORA17186007453260074652Rat
7681870Lsm7-ps1LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, pseudogene 1186008223760093262Rat
1566303Ptgr2-ps1prostaglandin reductase 2, pseudogene 1186009713760098997Rat
41383976LOC120098209uncharacterized LOC120098209186018363660194583Rat
41314139Gapdh-ps56Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 56186027355160273961Rat
1564795St13-ps1ST13, Hsp70 interacting protein, pseudogene 1186027657260277769Rat
2322845Cycs-ps9cytochrome c, somatic, pseudogene 9186028363560283952Rat
2322794Luc7l3-ps1LUC7-like 3 pre-mRNA splicing factor, pseudogene 1186030551760306759Rat
3057Mc4rmelanocortin 4 receptor186041983260421719Rat
41254053Gapdh-ps57Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 57186045712460458562Rat
40930674LOC120098374small nucleolar RNA SNORA48186052144960521579Rat
41315393LOC120098225NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1-like186056202260562179Rat
41204336LOC120098363small nucleolar RNA SNORA42/SNORA80 family186056304960563183Rat
2715GnalG protein subunit alpha L186062231160762599Rat
41249766Fam136a-ps3family with sequence similarity 136, member A, pseudogene 3186062292560631357Rat
41315866LOC120098241uncharacterized LOC120098241186063690560660960Rat
40940698LOC120098414U2 spliceosomal RNA186065208560652252Rat
41224917LOC120098242uncharacterized LOC120098242186070732560711524Rat
1593500Chmp1bcharged multivesicular body protein 1B186074034960742879Rat
1309184Mppe1metallophosphoesterase 1186076341860781553Rat
628692Impa2inositol monophosphatase 2186083420660867575Rat
41306054LOC120098339uncharacterized LOC120098339186083857560844484Rat
1305106Cideacell death-inducing DFFA-like effector a186089491760920485Rat
1305887Tubb6tubulin, beta 6 class V186094339460953031Rat
1305259Afg3l2AFG3 like matrix AAA peptidase subunit 2186095426860999110Rat
1582858Prelid3aPRELI domain containing 3A186099889861034821Rat
11479093LOC108353173heterogeneous nuclear ribonucleoprotein A3 pseudogene186102871661033474Rat
1305892Spire1spire-type actin nucleation factor 1186104191461171670Rat
41103344LOC120098357U1 spliceosomal RNA186104474161044905Rat
1305183Cep76centrosomal protein 76186117451461208512Rat
1304867Psmg2proteasome assembly chaperone 2186120866961227671Rat
620710Ptpn2protein tyrosine phosphatase, non-receptor type 2186122901261294662Rat
9366255Tmsb10l1thymosin, beta 10 like 1186133109661332947Rat
6490353Seh1lSEH1-like nucleoporin186134698661369987Rat
7633439LOC102552297uncharacterized LOC102552297186136366461373917Rat
1562797Cep192centrosomal protein 192186137393761458405Rat
41107086LOC120098367small nucleolar RNA SNORA33186142409361424221Rat
41187941Tuba1b-ps3tubulin, alpha 1B, pseudogene 3186148541761521355Rat
1587105Ldlrad4low density lipoprotein receptor class A domain containing 4186151925361848403Rat
1562758Gapdh-ps118Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 118186162698861628224Rat
41273283Trmt112-ps1tRNA methyltransferase activator subunit 11-2, pseudogene 1186182926261829727Rat
1359600Fam210afamily with sequence similarity 210, member A186184644761886123Rat
1309242RnmtRNA (guanine-7-) methyltransferase186188623061909775Rat
3058Mc5rmelanocortin 5 receptor186191518861920229Rat
628649Mc2rmelanocortin 2 receptor186200198062015567Rat
7616480LOC102548061uncharacterized LOC102548061186206865262155679Rat
41285070LOC120098190uncharacterized LOC120098190186247060262487267Rat
11465878LOC108348808uncharacterized LOC108348808186249611662509136Rat
11512205LOC108348809uncharacterized LOC108348809186267937362697171Rat
69271Tcf4transcription factor 4186294173963288126Rat
1561424Ccdc68coiled-coil domain containing 68186354182863584122Rat
620114Rab27bRAB27B, member RAS oncogene family186359755463794124Rat
40955792LOC120098422U4 spliceosomal RNA186379633663796423Rat
40983148LOC120098183uncharacterized LOC120098183186380773563810721Rat
1564477Ckap2-ps2cytoskeleton-associated protein 2, pseudogene 2186381875863822861Rat
7550710Dynapl1dynactin associated protein-like 1186386513663868338Rat
1596811Dynapdynactin associated protein186388516463909464Rat
1563837C18h18orf54similar to human chromosome 18 open reading frame 54186406512564090260Rat
1359639Stard6StAR-related lipid transfer domain containing 6186408961864118528Rat
1305212PoliDNA polymerase iota186411677464134373Rat
1595452Mbd2methyl-CpG binding domain protein 2186417400264240795Rat
41071324Polr2k-ps3RNA polymerase II, I and III subunit K, pseudogene 3186424932864249758Rat
1561134Rnf149l1ring finger protein 149 like 1186445159264452974Rat
2323104Hmga1-ps1high mobility group AT-hook 1, pseudogene 1186468714864687453Rat
2321355Rpl37-ps3ribosomal protein L37, pseudogene 3186480459464869547Rat
2492DccDCC netrin 1 receptor186486898765972783Rat
11402245LOC108348868uncharacterized LOC108348868186520005065209636Rat
40942548LOC120098154uncharacterized LOC120098154186563315965639597Rat
1309023Mex3cmex-3 RNA binding family member C186716760067188595Rat
3033Smad4SMAD family member 4186724374267274438Rat
7725693LOC102551612uncharacterized LOC102551612186729772667301603Rat
40999476Egfl7-ps1EGF-like-domain, multiple 7, pseudogene 1186731495667318012Rat
1304757Elac1elaC ribonuclease Z 1186732123167341358Rat
1310321Me2malic enzyme 2186735083367400987Rat
9438210Rpl31-ps13ribosomal protein L31, pseudogene 13186743212967432682Rat
1590648Rpl38l4ribosomal protein L38 like 4186743513167435363Rat
1559803Mromaestro186745018667467593Rat
3047Mapk4mitogen-activated protein kinase 4186751280567661271Rat
41031843LOC120098291uncharacterized LOC120098291186766127967664893Rat
7622461LOC102551934uncharacterized LOC102551934186767609367688061Rat
11392733LOC108348860uncharacterized LOC108348860186771436967723766Rat
41075010LOC120098344U7 small nuclear RNA186772038467720448Rat
11435416LOC108348861glyceraldehyde-3-phosphate dehydrogenase pseudogene186779138267793462Rat
1310784Ska1spindle and kinetochore associated complex subunit 1186779472267805037Rat
1310755Cxxc1CXXC finger protein 1186781318567818556Rat
6485424Rps17-ps3ribosomal protein S17, pseudogene 3186784343767844166Rat
1305980Mbd1methyl-CpG binding domain protein 1186786987067884501Rat
1306734Cfap53cilia and flagella associated protein 53186788465167955873Rat
11421033Rpl37al4ribosomal protein L37A like 4186793257967936520Rat
41181979LOC120098365small nucleolar RNA SNORA22186798570267985828Rat
1594273Edf1-ps3endothelial differentiation-related factor 1, pseudogene 3186802956668030298Rat
621347Myo5bmyosin Vb186803875968341568Rat
41202954LOC120098281uncharacterized LOC120098281186811665168125174Rat
41122412LOC120098280uncharacterized LOC120098280186820515668215370Rat
41243114LOC120098279uncharacterized LOC120098279186826156968264363Rat
41254274LOC120098116uncharacterized LOC120098116186834413968344878Rat
41170335Scarna17small Cajal body-specific RNA 17186834447568344553Rat
620482Acaa2acetyl-CoA acyltransferase 2186834513668373246Rat
7499022LOC102552571uncharacterized LOC102552571186839834768406835Rat
7675035LOC102557471uncharacterized LOC102557471186840506868412280Rat
1310740Lipglipase G, endothelial type186851492368536105Rat
40926764Trnap-agg92transfer RNA proline (anticodon AGG) 92186853920168539283Rat
1560896Slc25a5-ps11solute carrier family 25 member 5, pseudogene 11186857122268572461Rat
1303019Rpl17ribosomal protein L17186858114168584253Rat
41259955Snord58bsmall nucleolar RNA, C/D box 58B186858186468581929Rat
41237717LOC120098352small nucleolar RNA SNORD58186858225868582322Rat
41345076LOC120098351small nucleolar RNA SNORD58186858269168582755Rat
1562987C18h18orf32similar to human chromosome 18 open reading frame 32186858627868594851Rat
1309111Dymdymeclin186860513168900905Rat
41155797LOC120098440U6 spliceosomal RNA186864373768643836Rat
7507860LOC102556053uncharacterized LOC102556053186898302068985981Rat
69314Smad7SMAD family member 7186898842969016774Rat
1311887Ctifcap binding complex dependent translation initiation factor186905615169327454Rat
41050822LOC120098120uncharacterized LOC120098120186914109969145517Rat
7538513LOC102548286peroxisomal biogenesis factor 19-like186917896169181127Rat
7648927LOC102548225uncharacterized LOC102548225186932739069360937Rat
41116435LOC120098205uncharacterized LOC120098205186941859969427348Rat
1591841Zbtb7czinc finger and BTB domain containing 7C186944161669765744Rat
7600825LOC102556385uncharacterized LOC102556385186946033069498748Rat
3031Smad2SMAD family member 2186984988469918926Rat
7647004LOC102549578uncharacterized LOC102549578186994404669961893Rat
41183907LOC120098188uncharacterized LOC120098188187008676970091898Rat
40937264LOC120098218uncharacterized LOC120098218187016958470179983Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10647D18Wox12140186037761560377755Ratregion
10648D18Wox13171186037759060377753Ratregion
10667D18Mit17117186076313260763249Ratregion
33856D18Mit10239186040871960408944Ratregion
33884D18Mit8147185979647859796643Ratregion
34043D18Mit16150186169831761698465Ratregion
34182D18Mgh3171186584495065845095Ratregion
34218D18Mgh2213185971223459712417Ratregion
34256D4Mgh18124186205711662057171Ratregion
34270D18Mgh6136186702536067025492Ratregion
37412D18Rat40152185933040959330563Ratregion
37514D18Rat43212186357104063571267Ratregion
36816D18Rat12222186938409269384326Ratregion
36638D18Rat14173186393288563933058Ratregion
34781D18Rat7227186987686669877088Ratregion
34975D18Rat13149186363672163636873Ratregion
34993D18Rat11133186841398368414117Ratregion
35639D18Rat15171186623360666233777Ratregion
35677D18Rat10159186805865768058814Ratregion
35977D18Rat8163186914059269140759Ratregion
40670D18Rat87240186314087063141096Ratregion
40682D18Rat85205186514612965146325Ratregion
40710D18Rat89219186072228660722497Ratregion
38556D18Rat54249186543789165438136Ratregion
40244D18Rat83149186863156268631709Ratregion
42050D18Arb5268186076305360763320Ratregion
42052D18Arb6197186037758460377792Ratregion
42054D18Arb7185186319560063195769Ratregion
42883D9Rat159248186671291066713150Ratregion
41284D18Rat86175186548935565489518Ratregion
41356D18Rat82154187026369870263868Ratregion
41404D18Rat88125186336571863365833Ratregion
40908D18Rat90234186218573862185972Ratregion
41660D18Rat124201186490744864907655Ratregion
41754D18Rat123149186798379667983944Ratregion
43123D18Rat126200186402116564021365Ratregion
45532D18Got65262186917233569172598Ratregion
45534D18Got63170186392072763920897Ratregion
45536D18Got62213186090670160906914Ratregion
45537D18Wox6166186113406361134215Ratregion
45540D18Got64223186040871660408939Ratregion
45541D18Wox16152185969518459695364Ratregion
45543D18Got61114185950330559503419Ratregion
67820D18Uwm1171186978134269781517Ratregion
60017D12Got44175186855858568558759Ratregion
66578D18Mco5350186953010669530291Ratregion
66578D18Mco5350186953010669530370Ratregion
66581D18Mco7200186836193768362093Ratregion
1631045D18Got114152186635553366355687Ratregion
1578895D18Chm63185187001996670020153Ratregion
1578905D18Chm60235186719586267196099Ratregion
1578928D18Chm58188186518591265186096Ratregion
1579029D18Chm61133186841398468414117Ratregion
1579115D18Chm62163186924569469245857Ratregion
1579184D18Chm59153186597033165970689Ratregion
1579184D18Chm59153186597053465970689Ratregion
1629471D18Mco91038186229986662300904Ratregion
1640801D18Got128332186402724764027578Ratregion
1641762D18Got104137186851523668515373Ratregion
1633167D18Got123128186548931765489445Ratregion
1639791D18Got129264186595171465951978Ratregion
1637144D18Got127170186718287767183047Ratregion
5035965PMC324399P1413186991118169911594Ratregion
5036021PMC86557P1279186726053767260816Ratregion
5038748RH127310199186746706467467263Ratregion
5036195D18Wsu70e252186724380467244056Ratregion
5036563AU048444185185962506259625247Ratregion
5035572MC4R478186042046060420938Ratregion
5034163RH141608183186976536569765549Ratregion
5026314RH131736191186184658561846776Ratregion
5031694AU047461214186610885066109064Ratregion
5029133RH143646131186303825563038386Ratregion
5034678BI275599172186088721860887390Ratregion
5026816RH133642183186117925261179435Ratregion
5029651BF386607150186169410661694256Ratregion
5035470BE108561160186319636663196526Ratregion
5027155RH65263127186095219660952323Ratregion
5029837BI27883398186358381063583908Ratregion
5024950Mc2r116186200503362005149Ratregion
5025196RH127384220186991194969912169Ratregion
5030525BF403782102186831389268313994Ratregion
5033359RH138542124186184227861842402Ratregion
5025526RH128663183186732387367324056Ratregion
5033571RH139312196185949029759490493Ratregion
5056201RH144242179185982527459825453Ratregion
5051593AW550622100186104237661042476Ratregion
5053851RH142887203186306546063065663Ratregion
5054053RH143003257186965238869652840Ratregion
5051873RH94707190186037758160377763Ratregion
5052039RH94805254186041983860420092Ratregion
5054271RH143128149185999218159992332Ratregion
5054399RH143202203185948145959481664Ratregion
5057434AA858489194186991133969911533Ratregion
5054521RH143272216186407339964073615Ratregion
5057616BE095707165186728471167284876Ratregion
5054819RH143443102186724471067244812Ratregion
5054835RH143452123186872501468725137Ratregion
5055157RH143638121186118071961181005Ratregion
5059596BE097391179186153318061533359Ratregion
5056647RH144499288186766156367661851Ratregion
5056845RH144614191186073798360738174Ratregion
5052231D18928106185950904259509148Ratregion
5052295MHAa74a6.seq150185978157559781725Ratregion
5058152BI277637192186136941361369605Ratregion
5052673RH142200181186191647961916660Ratregion
5058914BF387226171186765960367659774Ratregion
5059714BF394247162186076925160769413Ratregion
5058276BF386932172186102683761027009Ratregion
5058312BI277908190186411400664114196Ratregion
5059098BF387492162186755539767555559Ratregion
5059188BF387606153186102763561027788Ratregion
5050412RH134041180186095282860953009Ratregion
5050684RH134198198185956000459560202Ratregion
5050800RH134265186186991807869918264Ratregion
5051244RH134522189186890066868900857Ratregion
5053333RH142588127186735680767356934Ratregion
5054629RH143334237186135492761356264Ratregion
5041806RH129069180186104309161043271Ratregion
5041114RH128670218186184803261848250Ratregion
5045104RH130986180186735585167356031Ratregion
5043906RH130297199186751292167513120Ratregion
5046564RH131826217186991854269918759Ratregion
5047432RH132324189186104203161042220Ratregion
5048890RH133165197186905756669057763Ratregion
5047018RH132087214186101814061018354Ratregion
5047122RH132146215186486922564869440Ratregion
5048464RH132919187186359496763595154Ratregion
5042314RH129363189186837305168373240Ratregion
5042534RH129492215186424063764240852Ratregion
5042546RH129499208186074167060741878Ratregion
5042572RH129515209186837295568373164Ratregion
5040176RH128133182186086500360865185Ratregion
5042614RH129541191186190663061906821Ratregion
5042100RH129239216186074167060741886Ratregion
5040458RH128295185186781824067818425Ratregion
5043124RH129846165186200201162002176Ratregion
5043172RH129873215186724383767244052Ratregion
5042370RH129395159186837308768373246Ratregion
5040284RH128195198186003374260033940Ratregion
5042646RH129559215186104241061042625Ratregion
5075114RH138406188186732133667321524Ratregion
5072664RH136981206186134376361343969Ratregion
5075292RH138510123186103453861034661Ratregion
5080586RH141665184186735111267351296Ratregion
5080684RH141722193186076360260763795Ratregion
5076046RH138947148186328705963287207Ratregion
5075164RH138435123186118619161186314Ratregion
5076730RH139345184186735274167352925Ratregion
5076808RH139390124186411578064115904Ratregion
5078348RH140289206186359792863598134Ratregion
5071138RH134908156186723938867239544Ratregion
5078868RH140598199186185141161851610Ratregion
5071504RH135120186186788267667882863Ratregion
5073878RH137691157186745775467457911Ratregion
5072400RH136827152186779493767795089Ratregion
5071802RH135293205186185385761854062Ratregion
5061786AI709546149185958377359583922Ratregion
5063336BE107548194186120847761208671Ratregion
5065106BF405832177186755551267555689Ratregion
5066822AU048130155186894067268940827Ratregion
5067914AU047460186186610884466109030Ratregion
5070235RH94550172186191785461918026Ratregion
5069104AU046722136186206675362066889Ratregion
5060196BF400698145186121510561215250Ratregion
5063522BE107748179186497075164970930Ratregion
5060628BI286279214186858227768582491Ratregion
5062224BE106373150186537946065379610Ratregion
5063802AW535225203185982889859829104Ratregion
5060730BF389035125186787133267871457Ratregion
5062576BF403438165186122708561227250Ratregion
5062778AW534410169186319711063197279Ratregion
5065328BI297035163186184982161849984Ratregion
5065360AA963895152186851330568513457Ratregion
5062448BI288878199186185280561853004Ratregion
5063982BE120364151186129662761296778Ratregion
5063990BE120385219186306729163067511Ratregion
5065698BE109662152186119251561192667Ratregion
5060920BF401382225186915404169154266Ratregion
5062774AW534396150185958002359580173Ratregion
5066030BE116587150186324976163249911Ratregion
5064536BF399308248186175514961755397Ratregion
5061516BE111942179186716238567162564Ratregion
5061662BE105775152186594549165945643Ratregion
5086877BM388257166186931537369315539Ratregion
5086100BF387725150186766467367664823Ratregion
5087340AI717058139186727965067279789Ratregion
5089843AU049396219186896438768964606Ratregion
5083193BF390958192186301840463018596Ratregion
5083339BF417987147186067258460672731Ratregion
5083439BF391242104186747518067475284Ratregion
5088831AU048796167186570772265707889Ratregion
5090165AU049589156186769746667697623Ratregion
5090235AU049630148186419293564193083Ratregion
5087574PMC324399P2500186724454367245043Ratregion
5085395BM390268190187003538770035577Ratregion
5090673AU049893216186290710462907320Ratregion
5090717AU049921182186142044361420625Ratregion
5085314AW534258163186487143364871596Ratregion
5081320RH142092193186086721960867412Ratregion
5085830BF387441183186751504367515226Ratregion
5085978BQ204385188186951808269518270Ratregion
5080884RH141838208186424281164243019Ratregion
5082755AW520939155186592011365920268Ratregion
5081555BE117353155186406578664065941Ratregion
5086707BE107285155186418780864187962Ratregion
5081837BE118490153186541887165419024Ratregion
5503296UniSTS:237838320186328689963287219Ratregion
5503692Smad71509186899031968991828Ratregion
5504526PMC26746P1117186918004269180159Ratregion
5504406PMC193708P2104186899159068991694Ratregion
5504608PMC314306P3270186042065460420924Ratregion
5506549MADH2_1658608186991115469911762Ratregion
5506712AF010230169186725190467252073Ratregion
5500346GDB:201899155186529627165296426Ratregion
5500891STS-Z407940186327565363275991Ratregion
5503300UniSTS:237833200186074091960741119Ratregion
5501217PMC156124P3298186095190660952204Ratregion
5501604RH36897670186927149769272167Ratregion
5505538D9S286720186695011566950835Ratregion
5506885G47243250186881713968817391Ratregion
Position Markers

Flank 1: (D18Rat40)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21859,330,409 - 59,330,563 (+)MAPPER
Rnor_6.01861,499,531 - 61,499,684NCBI
Rnor_5.01860,695,794 - 60,695,947UniSTS
RGSC_v3.41862,106,067 - 62,106,220UniSTS
RGSC_v3.41862,106,066 - 62,106,220RGD
RGSC_v3.11862,179,268 - 62,179,421RGD
Celera1857,453,190 - 57,453,343UniSTS
RH 3.4 Map18572.4RGD
RH 3.4 Map18572.4UniSTS
RH 2.0 Map18323.3RGD
SHRSP x BN Map1831.9599RGD
FHH x ACI Map1841.88RGD
Cytogenetic Map18q12.1UniSTS
Flank 2: (D18Rat82)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21870,263,698 - 70,263,868 (+)MAPPER
Rnor_6.01873,016,379 - 73,016,546NCBI
Rnor_5.01872,695,068 - 72,695,235UniSTS
RGSC_v3.41873,666,205 - 73,666,623RGD
RGSC_v3.41873,666,389 - 73,666,556UniSTS
RGSC_v3.11873,739,662 - 73,739,829RGD
Celera1868,791,744 - 68,791,911UniSTS
RH 3.4 Map18718.1UniSTS
RH 3.4 Map18718.1RGD
RH 2.0 Map18155.5RGD
SHRSP x BN Map1844.4299RGD
Cytogenetic Map18 RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1331733Bp233Blood pressure QTL 2333.97196arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182479697779788953Rat
1358358Sradr6Stress Responsive Adrenal Weight QTL 62.49adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)181194429959330563Rat
1331730Scl27Serum cholesterol level QTL 273.826blood HDL cholesterol amount (VT:0000184)serum high density lipoprotein cholesterol level (CMO:0000361)185229287559796643Rat
1331741Bp232Blood pressure QTL 2323.59112arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)182137289383213037Rat
1331742Bp228Blood pressure QTL 2283.88752arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135940859796643Rat
1298072Cia26Collagen induced arthritis QTL 263.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)185470976983828827Rat
1331736Bp227Blood pressure QTL 2272.791arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)184671876359796643Rat
1300125Rf26Renal function QTL 263.2urine potassium amount (VT:0010539)urine potassium excretion rate (CMO:0000761)185253986365844950Rat
631834Sach3Saccharin preference QTL 33.90.01consumption behavior trait (VT:0002069)calculated saccharin drink intake volume (CMO:0001600)185880568763636873Rat
6893683Bw110Body weight QTL 1102.70.002body mass (VT:0001259)body weight (CMO:0000012)184334502283828827Rat
1331727Bp237Blood pressure QTL 2373.053arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135940861698465Rat
9589041Epfw12Epididymal fat weight QTL 1217.080.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)184664067583828827Rat
8694432Bw165Body weight QTL 1653.810.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)184664067583828827Rat
70185BpQTLcluster15Blood pressure QTL cluster 154.61arterial blood pressure trait (VT:2000000)absolute change in systolic blood pressure (CMO:0000607)185971241776477814Rat
1331774Bp226Blood pressure QTL 2264.41065arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135940859796643Rat
9589816Gluco68Glucose level QTL 687.250.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)182979296574792965Rat
1331770Bp234Blood pressure QTL 2343.807arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)185979647871893566Rat
61360EaeyExperimental allergic encephalomyelitis QTL y3nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis duration (CMO:0001424)184698893960377753Rat
2300177Bmd65Bone mineral density QTL 6519.70.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)182896485373964853Rat
2301969Bp324Blood pressure QTL 3244.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)185971241776477814Rat
2303120Mamtr8Mammary tumor resistance QTL 80.001mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)183135940883218561Rat
1578667Bss21Bone structure and strength QTL 213.5femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)181179151883218561Rat
12880368Bw187Body weight QTL 1870.045body mass (VT:0001259)body weight (CMO:0000012)185253976376104388Rat
724542Kidm2Kidney mass QTL 22.6kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)185917211583828827Rat
61367Iddm4Insulin dependent diabetes mellitus QTL 42.330.0074blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)183819245583192455Rat
2293658Bmd23Bone mineral density QTL 237.30.0001femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)185146473363636873Rat
1359020Ppulsi2Prepulse inhibition QTL 22.71prepulse inhibition trait (VT:0003088)acoustic startle response measurement (CMO:0001519)185229287573997283Rat
2312600Bp341Blood pressure QTL 3410.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)185933040970263868Rat
2299160Iddm35Insulin dependent diabetes mellitus QTL 352.79blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)18420794160377792Rat
1331752Bw27Body weight QTL 272.963body mass (VT:0001259)body weight (CMO:0000012)185229287565845095Rat
9590318Scort22Serum corticosterone level QTL 227.640.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)182979296574792965Rat
1578661Bss20Bone structure and strength QTL 203.7femur morphology trait (VT:0000559)femoral neck cross-sectional area (CMO:0001697)181179151883218561Rat
1331754Bp230Blood pressure QTL 2304.61609arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182979296574792965Rat
12904069Cm123Cardiac mass QTL 1230.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)185253976376104388Rat
1331798Bp224Blood pressure QTL 2243.53873arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135940859796643Rat
12904070Cm124Cardiac mass QTL 1240.01heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)185253976376104388Rat
2303584Gluco55Glucose level QTL 552blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)184852004483828827Rat
12904071Am18Aortic mass QTL 180.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)185253976376104388Rat
61383Bp47Blood pressure QTL 4717.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)183127168160377755Rat
12904067Cm122Cardiac mass QTL 1220.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)185253976376104388Rat
61384Bp48Blood pressure QTL 4819.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)186062231177209844Rat
2301417Bp319Blood pressure QTL 3190.002arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)185253976376104388Rat
12904073Kidm71Kidney mass QTL 710.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)185253976376104388Rat
1331780Bp238Blood pressure QTL 2383.269arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)184671876359796643Rat
6903353Bp353Blood pressure QTL 3532.8arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)185979647883828827Rat
738008Hcar14Hepatocarcinoma resistance QTL 144.3liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion number (CMO:0001462)185146473383218561Rat
1331776Bp225Blood pressure QTL 2252.829arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)183135940859796643Rat
6903356Bp354Blood pressure QTL 3544.6arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)185979647883828827Rat
6903359Bp355Blood pressure QTL 3553.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)181194454459796478Rat
631518Bw11Body weight QTL 112.8body mass (VT:0001259)body weight (CMO:0000012)183587072380870723Rat
6903345Bp349Blood pressure QTL 3493.9arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)184671893559796478Rat
2313082Bss85Bone structure and strength QTL 850.80.0001long bone metaphysis morphology trait (VT:0000133)tibia midshaft total cross-sectional area (CMO:0001715)181495133759951337Rat
6903347Bp350Blood pressure QTL 3504.4arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135953059796478Rat
8694366Abfw8Abdominal fat weight QTL 86.380.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)184664067583828827Rat
631509Sald2Serum aldosterone level QTL 22.9blood aldosterone amount (VT:0005346)serum aldosterone level (CMO:0000487)185253976369140759Rat
6903349Bp351Blood pressure QTL 3513.5arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)184671893559796478Rat
738005Anxrr11Anxiety related response QTL 113.4exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)183003981375039813Rat
2300157Bmd66Bone mineral density QTL 6613.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)182896485373964853Rat
6903351Bp352Blood pressure QTL 3523.3arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)184671893559796478Rat
631274Sprol1Serum protein level QTL 15.3blood total protein amount (VT:0005567)serum total protein level (CMO:0000661)183139332077209694Rat
1358193Emca2Estrogen-induced mammary cancer QTL 21.6mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)181800759963571040Rat
2293704Bss35Bone structure and strength QTL 354.590.0002femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)182896485373964853Rat
2325839Bp348Blood pressure QTL 3480.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182557098570570985Rat
1600373Mamtr6Mammary tumor resistance QTL 6mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)181927890183218561Rat
2293708Bss46Bone structure and strength QTL 468.80.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)181179151863636873Rat
8694378Bw157Body weight QTL 1573.590.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)182979296574792965Rat
1600375Mcs22Mammary carcinoma susceptibility QTL 223.3mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)185253976363933058Rat
2303571Bw92Body weight QTL 923body mass (VT:0001259)body weight (CMO:0000012)184852004483828827Rat
631675Iddm15Insulin dependent diabetes mellitus QTL 15urine glucose amount (VT:0001758)percentage of study population developing diabetes mellitus during a period of time (CMO:0001114)186062231177209844Rat
1598826Anxrr20Anxiety related response QTL 203.04body movement coordination trait (VT:0005424)number of rearing movements in an experimental apparatus (CMO:0001752)184143297183828827Rat
61429Cia17Collagen induced arthritis QTL 174.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)183135940870263868Rat
7411719Strs5Sensitivity to stroke QTL 59.4cerebrum integrity trait (VT:0010549)percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)184999995865845095Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general to test the dependence of blood pressure phenotypes by genes expressed within or outside the kidney, SHR recipients were transplanted kidneys from SHR or SHR.BN-(D18Rat113-D18Rat82)/Ipcv; lower systolic blood pressure was noted in the latter ones 2312571
qtl_general this region contains blood pressure regualtory genes including 88 protein-coding genes 2312571
qtl_general software used: 2-way fixed ANOVA 2312571
qtl_general measurement method: at 15-17 weeks of age rats were given 1% NaCl for drinking instead of tap water and blood pressure was measured for 6 days 2312571
qtl_map 12.4cM; 11.6 Mbp 2312571