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Gene: Atg12 (autophagy related 12) Rattus norvegicus
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Symbol: Atg12
Name: autophagy related 12
Description: Predicted to have Atg8 ligase activity. Involved in autophagy. Localizes to the membrane and protein-containing complex. Orthologous to human ATG12 (autophagy related 12); PARTICIPATES IN autophagy pathway; Retinoic acid-inducible gene (RIG) I-like receptor signaling pathway; INTERACTS WITH 4-nonylphenol; bisphenol A; enniatin.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: APG12-like; Apg12l; ATG12 autophagy related 12 homolog; ATG12 autophagy related 12 homolog (S. cerevisiae); autophagy 12-like; autophagy 12-like (S. cerevisiae); autophagy-related 12; autophagy-related 12 (yeast); autophagy-related protein 12; LOC361321; MGC125080; ubiquitin-like protein ATG12
Orthologs:
Homo sapiens (human) : ATG12 (autophagy related 12)  HGNC  Alliance
Mus musculus (house mouse) : Atg12 (autophagy related 12)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atg12 (autophagy related 12)
Pan paniscus (bonobo/pygmy chimpanzee) : ATG12 (autophagy related 12)
Canis lupus familiaris (dog) : ATG12 (autophagy related 12)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atg12 (autophagy related 12)
Sus scrofa (pig) : ATG12 (autophagy related 12)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01840,721,799 - 40,732,143 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1840,721,800 - 40,732,126 (-)Ensembl
Rnor_5.01840,367,826 - 40,378,153 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41840,933,793 - 40,943,970 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11840,971,333 - 40,981,496 (-)NCBI
Celera1837,703,672 - 37,713,849 (-)NCBICelera
Cytogenetic Map18q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Atg12
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1306306
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.