Bp46 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Bp46 (Blood pressure QTL 46) Rattus norvegicus

Symbol: Bp46
Name: Blood pressure QTL 46
RGD ID: 61382
Trait: arterial blood pressure trait   (VT:2000000)    
Measurement Type: systolic blood pressure   (CMO:0000004)    
LOD Score: 18.8
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21811,941,791 - 31,393,320RGD_MAPPER_PIPELINE
Rnor_6.01815,532,963 - 32,704,022RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01815,307,563 - 32,348,480RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41812,406,571 - 32,459,145RGDRGSC3.4
RGSC_v3.11812,433,216 - 32,494,411RGD
Cross Type: intercross
Strains Crossed: BB/OK SHR/Mol 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
hypertension  (IDA)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
BB/OK  (IEA)
SHR/Mol  (IEA)

References

References - curated
1. Kovacs P, etal., Biochem Biophys Res Commun 1997 Jun 18;235(2):343-8
Related QTLs

Related QTL Description Reference
Bp32 interacts with RGD:61055
Bp2 maps to same region RGD:61055


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1590736Mapre2microtubule-associated protein, RP/EB family, member 2181481414915780290Rat
3916Ttrtransthyretin181553296315542180Rat
7670702LOC102551809uncharacterized LOC102551809181555501715558435Rat
1311143Dsg2desmoglein 2181557932215637720Rat
9105577LOC103694174uncharacterized LOC103694174181561942215629336Rat
7635703LOC102551904uncharacterized LOC102551904181563781915648994Rat
1592103Dsg3desmoglein 3181565294815688605Rat
11385951LOC108353181uncharacterized LOC108353181181569072215702885Rat
2324544LOC100362510tubulin alpha 6-like181569278315699898Rat
6504280Zfp397zinc finger protein 397181585684115865574Rat
1306095Zscan30zinc finger and SCAN domain containing 30181586647015880569Rat
1312031Zfp35zinc finger protein 35181588318215898803Rat
7699321LOC102552794proline-rich nuclear receptor coactivator 1-like181590517615908979Rat
727963Zfp24zinc finger protein 24181591017515921757Rat
6501135LOC10090985040S ribosomal protein SA-like181597233315973218Rat
1310199Ino80cINO80 complex subunit C181599500516009639Rat
7509723LOC102553011uncharacterized LOC102553011181601671716097963Rat
620358Galnt1polypeptide N-acetylgalactosaminyltransferase 1181614106216187271Rat
1563879LOC498829Ab2-143181618982216193940Rat
9301181LOC10369417539S ribosomal protein L30, mitochondrial pseudogene181624272416243286Rat
7747724LOC102547666uncharacterized LOC102547666181625528216257931Rat
1559877RGD1559877similar to 60S ribosomal protein L29 (P23)181633058016331097Rat
2325557Mir187microRNA 187181639050716390610Rat
7550719LOC102553405protein NYNRIN-like181641233816413795Rat
1564673MGC116121similar to RIKEN cDNA 2700062C07181643809116445514Rat
1307374Rprd1aregulation of nuclear pre-mRNA domain containing 1A181645016016497913Rat
7678926LOC10255357260S ribosomal protein L32-like181649009916491157Rat
1304664Slc39a6solute carrier family 39 member 6181652345016543992Rat
1306419Elp2elongator acetyltransferase complex subunit 2181654451516581086Rat
1308496Mocosmolybdenum cofactor sulfurase181659008616636312Rat
2322319Fhod3formin homology 2 domain containing 3181665078617332209Rat
7691274LOC102554593uncharacterized LOC102554593181677407816780382Rat
9225791LOC103694179uncharacterized LOC103694179181704966817051003Rat
1592105Hsc70-ps2heat shock cognate protein 70, pseudogene 2181711640117118671Rat
11460359LOC108348756glyceraldehyde-3-phosphate dehydrogenase pseudogene181717966717180852Rat
1310571Tpgs2tubulin polyglutamylase complex subunit 2181733903317396886Rat
1562608RGD1562608similar to KIAA1328 protein181739458617678605Rat
1307630Celf4CUGBP, Elav-like family member 4181768909018079835Rat
11511000LOC108348757uncharacterized LOC108348757181785028717874126Rat
1592102LOC291758similar to leucine aminopeptidase 3181793708717938177Rat
1596770LOC681320similar to 60S ribosomal protein L3 (L4)181796331217964542Rat
9208196LOC103694180uncharacterized LOC103694180181822164818311984Rat
9116426LOC103694181uncharacterized LOC103694181181903567419045100Rat
11422045LOC108348758uncharacterized LOC108348758181909097519108110Rat
1591344Spata45spermatogenesis associated 45181914913919149530Rat
7524065LOC102547344lateral signaling target protein 2 homolog181927213419275273Rat
7687052LOC102547510uncharacterized LOC102547510181961314419709285Rat
2321885LOC10036057240S ribosomal protein S15-like182037951620381776Rat
9273446LOC103694182uncharacterized LOC103694182182052014120520636Rat
11463091LOC108348760uncharacterized LOC108348760182098643621013804Rat
6498428LOC100910503uncharacterized LOC100910503182110966721114798Rat
7641502LOC102546350uncharacterized LOC102546350182116375621180550Rat
1589056LOC685830similar to tRNA splicing endonuclease 34182151780121518776Rat
11461415LOC108348761uncharacterized LOC108348761182189658721915083Rat
1591671LOC681731similar to Voltage-dependent anion-selective channel protein 1 (VDAC-1) (mVDAC1) (mVDAC5) (Outer mitochondrial membrane protein porin 1) (Plasmalemmal porin)182218966322190595Rat
6497625LOC100910588voltage-dependent anion-selective channel protein 1-like182219331022194040Rat
7695838LOC102546844uncharacterized LOC102546844182221217722220196Rat
7521148LOC10254722560S ribosomal protein L7-like182231456722315318Rat
7648889LOC102546931uncharacterized LOC102546931182232205022405771Rat
1564026RGD1564026similar to L-lactate dehydrogenase A chain (LDH-A) (LDH muscle subunit) (LDH-M)182286051722861434Rat
620899Pik3c3phosphatidylinositol 3-kinase, catalytic subunit type 3182296412123047896Rat
11454666LOC108348763uncharacterized LOC108348763182346987923479873Rat
1588518LOC364832similar to heat shock protein 8182356672323568683Rat
9433650LOC103694950uncharacterized LOC103694950182358039223586096Rat
1307654Rit2Ras-like without CAAX 2182370001224057917Rat
7635977LOC102549856ribosomal protein L18-like182393870823941031Rat
68397Syt4synaptotagmin 4182417258024181989Rat
1586633LOC686063similar to cytoplasmic beta-actin182426254124263804Rat
9451660LOC103694183uncharacterized LOC103694183182429076824296182Rat
1586622LOC686074similar to 60S ribosomal protein L35182431253924312985Rat
1305072Slc25a46solute carrier family 25, member 46182436910424397412Rat
1311657Sap130Sin3A associated protein 130182439752324497831Rat
1307915Ammecr1lAMMECR1 like182453953024563576Rat
6499927LOC100910201uncharacterized LOC100910201182455920924570650Rat
1308565Polr2dRNA polymerase II subunit D182457076224577894Rat
1309230Wdr33WD repeat domain 33182458483224689681Rat
1561764Sft2d3SFT2 domain containing 3182469128124693481Rat
1305273Lims2LIM zinc finger domain containing 2182470795124746159Rat
1589785Gpr17G protein-coupled receptor 17182473330624739194Rat
1561153Myo7bmyosin VIIb182474232924823889Rat
1584390PotefPOTE ankyrin domain family, member F182478052124783147Rat
7740915LOC102546309uncharacterized LOC102546309182483835224842034Rat
1304762Iws1interacts with SUPT6H, CTD assembly factor 1182484950824891339Rat
3411Procprotein C, inactivator of coagulation factors Va and VIIIa182491840224928822Rat
7707417LOC102546583uncharacterized LOC102546583182492995524961067Rat
7623521LOC102546511uncharacterized LOC102546511182494485824952297Rat
620967Map3k2mitogen activated protein kinase kinase kinase 2182496125025025488Rat
1307139Ercc3ERCC excision repair 3, TFIIH core complex helicase subunit182503766825068380Rat
11479734LOC108348764uncharacterized LOC108348764182514094925143802Rat
621786Bin1bridging integrator 1182516357525222139Rat
7590894Tex51testis expressed 51182524628625250240Rat
1310295Gypcglycophorin C (Gerbich blood group)182531238625344614Rat
2322847LOC100363500hypothetical LOC100363500182536287825364589Rat
1566345LOC498836LRRG00125182536994025370669Rat
1564290Ubbp4ubiquitin B pseudogene 4182539416025394853Rat
7558896LOC10254714860S ribosomal protein L7-like182547991925488751Rat
1586479Tslpthymic stromal lymphopoietin182561360125618066Rat
1586463Wdr36WD repeat domain 36182563747525665801Rat
2264Camk4calcium/calmodulin-dependent protein kinase IV182574687825975962Rat
1309475Stard4StAR-related lipid transfer domain containing 4182598221025997555Rat
631411Nrepneuronal regeneration related protein182618375326212796Rat
7565214LOC102549443uncharacterized LOC102549443182622564726237703Rat
6495224LOC100911019serine/arginine-rich splicing factor 3-like182644224426442773Rat
1306034Epb41l4aerythrocyte membrane protein band 4.1 like 4A182657005126788586Rat
7671519LOC10255287060S ribosomal protein L23a-like182682919926835513Rat
9353936LOC103694952uncharacterized LOC103694952182698501226999946Rat
2123ApcAPC regulator of WNT signaling pathway182701171027106323Rat
7613549LOC102549857uncharacterized LOC102549857182705846527061551Rat
1308437Srp19signal recognition particle 19182711482227121062Rat
1306047Reep5receptor accessory protein 5182712846227159693Rat
7637519LOC102549915signal recognition particle 19 kDa protein-like182713325127134972Rat
1310272Pkd2l2polycystin 2 like 2, transient receptor potential cation channel182719066127225488Rat
7499234LOC102549063protein SET-like182720569427206514Rat
9264054LOC103694185protein SET-like182720569427207592Rat
1310484Fam13bfamily with sequence similarity 13, member B182722334527304462Rat
1306312Wnt8aWnt family member 8A182733123627336829Rat
1583004Nme5NME/NM23 family member 5182735746027374641Rat
9352503LOC103694186bromodomain-containing protein 8-like182737557327386185Rat
1307003Brd8bromodomain containing 8182737564527423989Rat
1307695Kif20akinesin family member 20A182742432827432814Rat
1304819Cdc23cell division cycle 23182743092427452569Rat
620502Gfra3GDNF family receptor alpha 3182749186027520133Rat
1311875Cdc25ccell division cycle 25C182752876827550316Rat
2323347LOC100363294stem-loop binding protein-like182755042627557699Rat
11451504LOC108348765uncharacterized LOC108348765182755777627561078Rat
1593851Fam53cfamily with sequence similarity 53, member C182755809427572633Rat
1583423Kdm3blysine demethylase 3B182759382327631129Rat
1586980Reep2receptor accessory protein 2182763256227641594Rat
2544Egr1early growth response 1182765790327660101Rat
7615034LOC102550732uncharacterized LOC102550732182767760627680438Rat
1305712Etf1eukaryotic translation termination factor 1182769869327725694Rat
1311806Hspa9heat shock protein family A (Hsp70) member 9182773107227749235Rat
11514929LOC108353164uncharacterized LOC108353164182790362227914642Rat
1359485Ctnna1catenin alpha 1182792322928055972Rat
1593785Lrrtm2leucine rich repeat transmembrane neuronal 2182801287728017925Rat
735103Sil1SIL1 nucleotide exchange factor182806747628302008Rat
7650468LOC102550858uncharacterized LOC102550858182830203828305523Rat
3052Matr3matrin 3182835169128390764Rat
4888598Mir1949microRNA 1949182835314928353245Rat
5130376Snhg4small nucleolar RNA host gene 4 (non-protein coding)182835598728356223Rat
1359176Paip2poly(A) binding protein interacting protein 2182839732028415911Rat
619875Slc23a1solute carrier family 23 member 1182841391028428133Rat
1310251Mzb1marginal zone B and B1 cell-specific protein182843654628438607Rat
1594845Prob1proline-rich basic protein 1182843998528446585Rat
1311742Spata24spermatogenesis associated 24182844659228454724Rat
1310237Dnajc18DnaJ heat shock protein family (Hsp40) member C18182846689228501013Rat
1594804Ecscrendothelial cell surface expressed chemotaxis and apoptosis regulator182850716728516567Rat
1562552Sting1stimulator of interferon response cGAMP interactor 1182852953728535828Rat
1591897Ube2d2ubiquitin-conjugating enzyme E2D 2182856195728603335Rat
7608294LOC102551514uncharacterized LOC102551514182861190028616036Rat
9210676LOC103694192vegetative cell wall protein gp1-like182862549328653639Rat
1359466Cxxc5CXXC finger protein 5182862638628656916Rat
9198155LOC103694188uncharacterized LOC103694188182862660728630077Rat
1564574RGD1564574similar to 40S ribosomal protein S16182868411328697411Rat
9272642LOC103694193NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 pseudogene182874556628747019Rat
7591891LOC102551758uncharacterized LOC102551758182875502528758332Rat
11437200LOC108348766uncharacterized LOC108348766182875843528761892Rat
1311075Psd2pleckstrin and Sec7 domain containing 2182878126728832429Rat
1303302Nrg2neuregulin 2182883539129015552Rat
9428726LOC103694189uncharacterized LOC103694189182892279628931075Rat
11361777LOC108353165uncharacterized LOC108353165182900657529009838Rat
7498283LOC102557111WAS/WASL-interacting protein family member 3-like182910385029110215Rat
1308543Purapurine rich element binding protein A182910471229114918Rat
2323374IgipIgA-inducing protein182911505129125681Rat
2323233Cystm1cysteine-rich transmembrane module containing 1182916520629233351Rat
1305603Pfdn1prefoldin subunit 1182923398729290447Rat
2526Hbegfheparin-binding EGF-like growth factor182933030229340185Rat
628811Slc4a9solute carrier family 4 member 9182935259629373603Rat
4892133Ankhd1ankyrin repeat and KH domain containing 1182938690629485611Rat
2324556Eif4ebp3eukaryotic translation initiation factor 4E binding protein 3182949098129492727Rat
621148Sra1steroid receptor RNA activator 1182949400429497232Rat
620853Apbb3amyloid beta precursor protein binding family B member 3182949786529504995Rat
628792Slc35a4solute carrier family 35, member A4182950523929509304Rat
1565779RGD1565779similar to hypothetical protein E230025N22182951068529520459Rat
1590895LOC307495similar to biliverdin reductase B (flavin reductase (NADPH))182953512329540186Rat
1563066RGD1563066similar to Ac2-210182955619929556893Rat
620588Cd14CD14 molecule182956034129562290Rat
1309263Tmco6transmembrane and coiled-coil domains 6182957914529585740Rat
1309997Ndufa2NADH:ubiquinone oxidoreductase subunit A2182958567129587760Rat
1359352IkIK cytokine182958790129602705Rat
1305640Wdr55WD repeat domain 55182960521729608730Rat
1583648Dnd1DND microRNA-mediated repression inhibitor 1182960858829611212Rat
1310695Hars1histidyl-tRNA synthetase 1182961154529629087Rat
1308426Hars2histidyl-tRNA synthetase 2, mitochondrial182962920329638460Rat
1583592Zmat2zinc finger, matrin type 2182963999129644626Rat
9344014LOC103694190uncharacterized LOC103694190182970125629706529Rat
9106604LOC103694191uncharacterized LOC103694191182972824329733516Rat
7632293LOC102553180protocadherin alpha-1-like182982489129839850Rat
6487485LOC100912385zinc finger protein 260-like182988601829889498Rat
9474198LOC103694200zinc finger protein 120-like182991251429915456Rat
620337Pcdha4protocadherin alpha 4182995021730215901Rat
735016Pcdha1protocadherin alpha 1182995109430215896Rat
735182Pcdha2protocadherin alpha 2182996007230215896Rat
620336Pcdha3protocadherin alpha 3182996624530215896Rat
735200Pcdha5protocadherin alpha 5182998026830215897Rat
735165Pcdha6protocadherin alpha 6182998720630215896Rat
735055Pcdha7protocadherin alpha 7182999336130215896Rat
620338Pcdha8protocadherin alpha 8182999929030215896Rat
735153Pcdha9protocadherin alpha 9183000456530215897Rat
620749Pcdha10protocadherin alpha 10183001091830215896Rat
1594480Pcdha11protocadherin alpha 11183001791830215896Rat
620750Pcdha12protocadherin alpha 12183002382830215896Rat
620751Pcdha13protocadherin alpha 13183003688730215897Rat
735086Pcdhac1protocadherin alpha subfamily C, 1183011470830215896Rat
735216Pcdhac2protocadherin alpha subfamily C, 2183017274030215896Rat
2322524LOC100360226hypothetical LOC100360226183023059930231046Rat
1308760Pcdhb1protocadherin beta 1183028264530298971Rat
1563132Pcdhb2protocadherin beta 2183037579830378194Rat
1305171Pcdhb3protocadherin beta 3183038132230383876Rat
1308912Pcdhb4protocadherin beta 4183038793730390476Rat
1304665Pcdhb5protocadherin beta 5183039811330400695Rat
1306123Pcdhb6protocadherin beta 6183041603830419400Rat
1309422Pcdhb7protocadherin beta 7183042290830428141Rat
1309895Pcdhb8protocadherin beta 8183043511930437458Rat
1596855LOC680032similar to Fructose-bisphosphate aldolase A (Muscle-type aldolase)183046528530466730Rat
1596840Pcdhb9protocadherin beta 9183047494730478117Rat
1308364Pcdhb10protocadherin beta 10183048590130492523Rat
1309608Pcdhb11protocadherin beta 11183049559530502514Rat
2322275LOC100360378hypothetical LOC100360378183050708230508993Rat
3266Pcdhb12protocadherin beta 12183050939330512411Rat
11376545Pcdhb6lprotocadherin beta-6-like183051250730518524Rat
1307591Pcdhb14protocadherin beta 14183052713030530330Rat
11357404LOC10834877060S ribosomal protein L26-like 1 pseudogene183053250230540978Rat
11368541LOC108348201protocadherin beta-7-like183054851330553559Rat
1591006LOC690826similar to protocadherin beta 16183055356830559782Rat
11492646Pcdhb16lprotocadherin beta-16-like183056079930565316Rat
1549775Pcdhb17protocadherin beta 17183056581730570184Rat
1549697Pcdhb19protocadherin beta 19183057211030577286Rat
1594228Pcdhb20protocadherin beta 20183058153030584905Rat
1305349Pcdhb21protocadherin beta 21183058787230590789Rat
1310328Pcdhb22protocadherin beta 22183059086430595456Rat
1588517LOC364842similar to Ferritin light chain 1 (Ferritin L subunit 1)183076883230769615Rat
1310667Slc25a2solute carrier family 25 member 2183077420530775401Rat
1309935Taf7TATA-box binding protein associated factor 7183077914930781297Rat
1563159RGD1563159RGD1563159183080148230802242Rat
1590761Pcdhga1protocadherin gamma subfamily A, 1183080840430971113Rat
1587259Pcdhga2protocadherin gamma subfamily A, 2183081495730971113Rat
1598664Pcdhga3protocadherin gamma subfamily A, 3183082015130971113Rat
1560482Pcdhgb1protocadherin gamma subfamily B, 1183082526030829027Rat
620725Pcdhga4protocadherin gamma subfamily A, 4183083103630834819Rat
11469063LOC108353166protocadherin gamma-B2-like183083491830840618Rat
1311949Pcdhga5protocadherin gamma subfamily A, 5183084070030971113Rat
9133771LOC103694196uncharacterized LOC103694196183084937130852190Rat
7625105Pcdhga6protocadherin gamma subfamily A, 6183085523630863958Rat
1305108Pcdhga7protocadherin gamma subfamily A, 7183086401230971113Rat
7632725Pcdhgb4protocadherin gamma subfamily B, 4183086906230872126Rat
1310676Pcdhga8protocadherin gamma subfamily A, 8183087487330971113Rat
1591752Pcdhgb5protocadherin gamma subfamily B, 5183087808430883481Rat
620729Pcdhga9protocadherin gamma subfamily A, 9183088560530971113Rat
7743693Pcdhgb6protocadherin gamma subfamily B, 6183089049330893868Rat
1308289Pcdhga10protocadherin gamma subfamily A, 10183089568430971113Rat
1588516Pcdhgb7protocadherin gamma subfamily B, 7183090012030971116Rat
621232Pcdhga11protocadherin gamma subfamily A, 11183090436430971113Rat
1307432Pcdhgb8protocadherin gamma subfamily B, 8183090931830971113Rat
1587258Pcdhga12protocadherin gamma subfamily A, 12183091365530971113Rat
620746Pcdhgc3protocadherin gamma subfamily C, 3183095455230971113Rat
2312582Pcdhgc5protocadherin gamma subfamily C, 5183096440230969584Rat
1310707Diaph1diaphanous-related formin 1183097290731071371Rat
619977Hdac3histone deacetylase 3183107305731094347Rat
1305276Rell2RELT-like 2183109496531098536Rat
1308240Fchsd1FCH and double SH3 domains 1183109681531109077Rat
1304938Arap3ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3183111208331138142Rat
11369277LOC108348772uncharacterized LOC108348772183129539031312627Rat
1308490Pcdh1protocadherin 1183133008131343147Rat
735029Dele1DAP3 binding cell death enhancer 1183139689731409914Rat
619917Pcdh12protocadherin 12183141553331431108Rat
1589576Rnf14ring finger protein 14183144342431468641Rat
1585624Gnpda1glucosamine-6-phosphate deaminase 1183147911731489154Rat
1310053Ndfip1Nedd4 family interacting protein 1183157475931625286Rat
11489685LOC10834877360S ribosomal protein L34 pseudogene183158883331591485Rat
9145800LOC103694197uncharacterized LOC103694197183162021731623095Rat
2741Nr3c1nuclear receptor subfamily 3, group C, member 1183172837332704022Rat
7662502LOC102547564uncharacterized LOC102547564183175608031767091Rat
6493059LOC100911367uncharacterized LOC100911367183179250331808720Rat
1310923Arhgap26Rho GTPase activating protein 26183180705232557176Rat
11505777LOC108348867uncharacterized LOC108348867183181239731814088Rat
9398406LOC103694198uncharacterized LOC103694198183211360032119048Rat
2605Fgf1fibroblast growth factor 1183227383032359831Rat
7524540LOC102556326uncharacterized LOC102556326183230217632303683Rat
7604298LOC102555677uncharacterized LOC102555677183242399732437180Rat
11453601Trnaa-agc20transfer RNA alanine (anticodon AGC) 20183242461432424686Rat
11386003LOC108353182uncharacterized LOC108353182183254977132560541Rat
7701056LOC102547511uncharacterized LOC102547511183255726832570049Rat
1305324Spry4sprouty RTK signaling antagonist 4183259337032609890Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10287D18Wox14148182575036425750511Ratregion
10689D18Mit5110183267035232670473Ratregion
33949D18Mit1496181588992715890022Ratregion
34340D18Mgh7135182260462622604764Ratregion
34340D18Mgh7135182260373622604764Ratregion
34550D18Mgh9136182596102625961165Ratregion
11461D18Mit1245181553942715539671Ratregion
11462D18Wox7200181553955115539697Ratregion
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Position Markers

Flank 1: (Ttr)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21811,941,791 - 11,951,008 (+)NCBI
Rnor_6.0 Ensembl1815,532,963 - 15,540,177 (-)Ensembl
Rnor_6.01815,532,963 - 15,542,180 (-)NCBI
Rnor_5.01815,307,563 - 15,316,780 (-)NCBI
RGSC_v3.41812,406,571 - 12,413,680 (+)NCBI
RGSC_v3.11812,433,216 - 12,440,326 (+)NCBI
Celera1811,951,406 - 11,958,617 (+)NCBI
RH 3.4 Map1891.82RGD
Cytogenetic Map18p12NCBI
Flank 2: (Nr3c1)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21831,271,681 - 31,393,320 (-)NCBI
Rnor_6.0 Ensembl1831,728,373 - 31,749,647 (-)Ensembl
Rnor_6.01831,728,373 - 32,704,022 (-)NCBI
Rnor_5.01831,408,742 - 31,442,725 (-)NCBI
Rnor_5.01832,347,227 - 32,348,480 (-)NCBI
RGSC_v3.41832,371,496 - 32,459,145 (-)NCBI
RGSC_v3.11832,406,765 - 32,494,411 (-)NCBI
Celera1830,905,394 - 30,993,522 (-)NCBI
RH 3.4 Map18442.9RGD
Cytogenetic Map18p11NCBI


QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
9590248Scort10Serum corticosterone level QTL 1019.710.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)18125999214Rat
8552968Pigfal19Plasma insulin-like growth factor 1 level QTL 1911.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)18125999214Rat
61388Bp2Blood pressure QTL 23.23arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)18135097280Rat
2300180Bmd67Bone mineral density QTL 674.80.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)18138195967Rat
2293661Bss50Bone structure and strength QTL 504.640.0003lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)18138195967Rat
9589153Insul31Insulin level QTL 317.150.05blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)18138753381Rat
1641910Colcr3Colorectal carcinoma resistance QTL 35.020.000007intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor surface area measurement (CMO:0002078)18247709623184414Rat
1641910Colcr3Colorectal carcinoma resistance QTL 35.020.000007intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor number (CMO:0002076)18247709623184414Rat
2312598Bp340Blood pressure QTL 3400.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)18371954732487870Rat
2299160Iddm35Insulin dependent diabetes mellitus QTL 352.79blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)18440751362570466Rat
2312568Glom21Glomerulus QTL 2120.005kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)18543013441781619Rat
2313082Bss85Bone structure and strength QTL 850.80.0001long bone metaphysis morphology trait (VT:0000133)tibia midshaft total cross-sectional area (CMO:0001715)181467885259678852Rat
631264Scl22Serum cholesterol level QTL 226.2blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)181553296332704022Rat
61382Bp46Blood pressure QTL 4618.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)181553296332704022Rat
1331781Scl28Serum cholesterol level QTL 283.995blood HDL cholesterol amount (VT:0000184)serum high density lipoprotein cholesterol level (CMO:0000361)181553942725961165Rat
1331766Bp236Blood pressure QTL 2363.022arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)181553942732670473Rat
1331753Bp231Blood pressure QTL 2313.643arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)181553942753861431Rat
1358358Sradr6Stress Responsive Adrenal Weight QTL 62.49adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)181553942761499684Rat
2301410Bp317Blood pressure QTL 3170.004arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)181553955127743236Rat
12904690Cm129Cardiac mass QTL 1290.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)181553955127743236Rat
12904689Cm128Cardiac mass QTL 1280.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)181553955127743236Rat
12904693Am20Aortic mass QTL 200.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)181553955127743236Rat
12904695Kidm73Kidney mass QTL 730.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)181553955127743236Rat
12904691Cm130Cardiac mass QTL 1300.001heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)181553955127743236Rat
12904680Bw189Body weight QTL 1890.019body mass (VT:0001259)body weight (CMO:0000012)181553955127743236Rat
61375Bp41Blood pressure QTL 412.4blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)181553967129530300Rat
6903359Bp355Blood pressure QTL 3553.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)181553967161985648Rat
2293708Bss46Bone structure and strength QTL 468.80.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)181569587268524999Rat
1578661Bss20Bone structure and strength QTL 203.7femur morphology trait (VT:0000559)femoral neck cross-sectional area (CMO:0001697)181569587287080053Rat
1578667Bss21Bone structure and strength QTL 213.5femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)181569587287080053Rat
1358193Emca2Estrogen-induced mammary cancer QTL 21.6mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)181903103068436105Rat
1331775Bp235Blood pressure QTL 2353.201arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)181925171732670473Rat
1331735Rf44Renal function QTL 442.981total urine protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)181925171732670473Rat
1600373Mamtr6Mammary tumor resistance QTL 6mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)182028575887080053Rat
7387267Uae42Urinary albumin excretion QTL 420.61urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)142163949166639491Rat
1331741Bp232Blood pressure QTL 2323.59112arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)182260373687074531Rat
6903353Bp353Blood pressure QTL 3532.8arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)182260476461985648Rat
1641923Colcr8Colorectal carcinoma resistance QTL 83.10.0014intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor number (CMO:0002076)182318422753861431Rat
1331733Bp233Blood pressure QTL 2333.97196arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182596102681761656Rat
2325839Bp348Blood pressure QTL 3480.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182674340443659626Rat
2301413Bp318Blood pressure QTL 3180.002arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182774302448499517Rat
12904673Cm127Cardiac mass QTL 1270.005heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)182774302448499517Rat
12904675Am19Aortic mass QTL 190.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)182774302448499517Rat
12904677Kidm72Kidney mass QTL 720.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)182774302448499517Rat
12904668Bw188Body weight QTL 1880.03body mass (VT:0001259)body weight (CMO:0000012)182774302448499517Rat
12904669Cm125Cardiac mass QTL 1250.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)182774302448499517Rat
12904670Cm126Cardiac mass QTL 1260.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)182774302448499517Rat
2300157Bmd66Bone mineral density QTL 6613.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)183053361475533614Rat
2300177Bmd65Bone mineral density QTL 6519.70.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)183053361475533614Rat
2293704Bss35Bone structure and strength QTL 354.590.0002femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)183053361475533614Rat
9590318Scort22Serum corticosterone level QTL 227.640.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)183136134176361341Rat
1331754Bp230Blood pressure QTL 2304.61609arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183136134176361341Rat
9589816Gluco68Glucose level QTL 687.250.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)183136134176361341Rat
8694378Bw157Body weight QTL 1573.590.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)183136134176361341Rat
738005Anxrr11Anxiety related response QTL 113.4exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)183160842476608424Rat
61383Bp47Blood pressure QTL 4717.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)183172837362570429Rat
1331776Bp225Blood pressure QTL 2252.829arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)183267035261985812Rat
1331774Bp226Blood pressure QTL 2264.41065arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183267035261985812Rat
1331742Bp228Blood pressure QTL 2283.88752arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183267035261985812Rat
1331798Bp224Blood pressure QTL 2243.53873arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183267035261985812Rat
1331727Bp237Blood pressure QTL 2373.053arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183267035263897621Rat
61429Cia17Collagen induced arthritis QTL 174.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)183267035273016546Rat
2303120Mamtr8Mammary tumor resistance QTL 80.001mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)183267035287080053Rat
6903347Bp350Blood pressure QTL 3504.4arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183267047361985648Rat
631274Sprol1Serum protein level QTL 15.3blood total protein amount (VT:0005567)serum total protein level (CMO:0000661)183270402280696226Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Bp46

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general linked to the albumin and phosphate excretion 61055