Myo5b (myosin Vb) - Rat Genome Database

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Gene: Myo5b (myosin Vb) Rattus norvegicus
Analyze
Symbol: Myo5b
Name: myosin Vb
RGD ID: 621347
Description: Enables several functions, including ATP hydrolysis activity; ionotropic glutamate receptor binding activity; and small GTPase binding activity. Involved in several processes, including cellular response to glycine; endosomal transport; and positive regulation of neurogenesis. Located in several cellular components, including dendritic spine; neuronal cell body; and recycling endosome. Is active in several cellular components, including Schaffer collateral - CA1 synapse; postsynaptic actin cytoskeleton; and postsynaptic recycling endosome membrane. Human ortholog(s) of this gene implicated in microvillus inclusion disease and progressive familial intrahepatic cholestasis. Orthologous to human MYO5B (myosin VB); PARTICIPATES IN vasopressin signaling pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; vasopressin signaling pathway via receptor type 2; INTERACTS WITH 1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane; 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: myosin 5B; myosin heavy chain myr 6; Myosin of the dilute-myosin-V family; myosin-Vb; Myr6; unconventional myosin-Vb
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81870,313,717 - 70,613,918 (+)NCBIGRCr8
mRatBN7.21868,038,759 - 68,341,568 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1868,038,759 - 68,338,745 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1870,146,914 - 70,446,818 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01870,812,463 - 71,116,126 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01868,671,318 - 68,972,854 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01870,426,865 - 70,729,985 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1870,427,007 - 70,729,030 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01869,568,169 - 69,869,070 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41871,381,068 - 71,580,824 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11871,454,267 - 71,654,025 (+)NCBI
Celera1866,217,242 - 66,515,213 (+)NCBICelera
Cytogenetic Map18q12.2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-catechin  (ISO)
(1->4)-beta-D-glucan  (ISO)
(S)-nicotine  (ISO)
1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane  (EXP,ISO)
1,2-dimethylhydrazine  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2,6-dinitrotoluene  (EXP)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
6-propyl-2-thiouracil  (EXP)
acrylamide  (EXP)
aflatoxin B1  (ISO)
Aflatoxin B2 alpha  (ISO)
all-trans-retinoic acid  (ISO)
ammonium chloride  (EXP)
antirheumatic drug  (ISO)
arsenous acid  (ISO)
atrazine  (EXP)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bisphenol A  (EXP,ISO)
caffeine  (ISO)
calcitriol  (ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
cisplatin  (ISO)
coumestrol  (ISO)
cyclosporin A  (ISO)
dextran sulfate  (ISO)
diarsenic trioxide  (ISO)
dibutyl phthalate  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (EXP)
Enterolactone  (ISO)
entinostat  (ISO)
enzyme inhibitor  (ISO)
ethanol  (EXP,ISO)
folic acid  (ISO)
gentamycin  (EXP)
glyphosate  (EXP)
haloperidol  (ISO)
inulin  (ISO)
kainic acid  (ISO)
methamphetamine  (ISO)
methoxychlor  (EXP)
methylmercury chloride  (ISO)
N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal  (ISO)
nicotine  (ISO)
panobinostat  (ISO)
paracetamol  (EXP,ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (EXP)
phenobarbital  (ISO)
pirinixic acid  (EXP,ISO)
SB 431542  (ISO)
sodium arsenite  (ISO)
Soman  (EXP)
sunitinib  (ISO)
tamoxifen  (ISO)
testosterone  (ISO)
trichloroethene  (EXP)
trichostatin A  (ISO)
triclosan  (ISO)
trimellitic anhydride  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Physiology and pathophysiology of the vasopressin-regulated renal water reabsorption. Boone M and Deen PM, Pflugers Arch. 2008 Sep;456(6):1005-24. Epub 2008 Apr 23.
2. Requirement of myosin Vb.Rab11a.Rab11-FIP2 complex in cholesterol-regulated translocation of NPC1L1 to the cell surface. Chu BB, etal., J Biol Chem. 2009 Aug 14;284(33):22481-90. doi: 10.1074/jbc.M109.034355. Epub 2009 Jun 19.
3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4. Muscle cells engage Rab8A and myosin Vb in insulin-dependent GLUT4 translocation. Ishikura S and Klip A, Am J Physiol Cell Physiol. 2008 Oct;295(4):C1016-25. Epub 2008 Aug 13.
5. BDNF regulates Rab11-mediated recycling endosome dynamics to induce dendritic branching. Lazo OM, etal., J Neurosci. 2013 Apr 3;33(14):6112-22. doi: 10.1523/JNEUROSCI.4630-12.2013.
6. Involvement of myosin Vb in glutamate receptor trafficking. Lise MF, etal., J Biol Chem. 2006 Feb 10;281(6):3669-78. Epub 2005 Dec 7.
7. Myosin Vb controls biogenesis of post-Golgi Rab10 carriers during axon development. Liu Y, etal., Nat Commun. 2013;4:2005. doi: 10.1038/ncomms3005.
8. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
9. A Role of myosin Vb and Rab11-FIP2 in the aquaporin-2 shuttle. Nedvetsky PI, etal., Traffic. 2007 Feb;8(2):110-23. Epub 2006 Dec 6.
10. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
11. Chemical-genetic inhibition of a sensitized mutant myosin Vb demonstrates a role in peripheral-pericentriolar membrane traffic. Provance DW, etal., Proc Natl Acad Sci U S A. 2004 Feb 17;101(7):1868-73. Epub 2004 Feb 6.
12. GOA pipeline RGD automated data pipeline
13. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
14. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
15. Rho GTPases in insulin-stimulated glucose uptake. Satoh T Small GTPases. 2014;5:e28102. doi: 10.4161/sgtp.28102. Epub 2014 Mar 10.
16. Role for myosin-V motor proteins in the selective delivery of Kv channel isoforms to the membrane surface of cardiac myocytes. Schumacher-Bass SM, etal., Circ Res. 2014 Mar 14;114(6):982-92. doi: 10.1161/CIRCRESAHA.114.302711. Epub 2014 Feb 7.
17. MST3 kinase phosphorylates TAO1/2 to enable Myosin Va function in promoting spine synapse development. Ultanir SK, etal., Neuron. 2014 Dec 3;84(5):968-82. doi: 10.1016/j.neuron.2014.10.025. Epub 2014 Nov 13.
18. Myosin Vb mobilizes recycling endosomes and AMPA receptors for postsynaptic plasticity. Wang Z, etal., Cell. 2008 Oct 31;135(3):535-48. doi: 10.1016/j.cell.2008.09.057.
19. Cloning and characterization of myr 6, an unconventional myosin of the dilute/myosin-V family. Zhao LP, etal., Proc Natl Acad Sci U S A 1996 Oct 1;93(20):10826-31.
Additional References at PubMed
PMID:17462998   PMID:17507647   PMID:19056867   PMID:20124353   PMID:21206382   PMID:22114352   PMID:23389633   PMID:30545898  


Genomics

Comparative Map Data
Myo5b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81870,313,717 - 70,613,918 (+)NCBIGRCr8
mRatBN7.21868,038,759 - 68,341,568 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1868,038,759 - 68,338,745 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1870,146,914 - 70,446,818 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01870,812,463 - 71,116,126 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01868,671,318 - 68,972,854 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01870,426,865 - 70,729,985 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1870,427,007 - 70,729,030 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01869,568,169 - 69,869,070 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41871,381,068 - 71,580,824 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11871,454,267 - 71,654,025 (+)NCBI
Celera1866,217,242 - 66,515,213 (+)NCBICelera
Cytogenetic Map18q12.2NCBI
MYO5B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381849,822,789 - 50,195,147 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1849,822,789 - 50,195,164 (-)EnsemblGRCh38hg38GRCh38
GRCh371847,349,159 - 47,721,517 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361845,603,099 - 45,975,382 (-)NCBINCBI36Build 36hg18NCBI36
Build 341845,603,183 - 45,975,176NCBI
Celera1844,205,823 - 44,578,011 (-)NCBICelera
Cytogenetic Map18q21.1NCBI
HuRef1844,203,440 - 44,575,850 (-)NCBIHuRef
CHM1_11847,344,771 - 47,717,073 (-)NCBICHM1_1
T2T-CHM13v2.01850,024,565 - 50,396,878 (-)NCBIT2T-CHM13v2.0
Myo5b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391874,575,435 - 74,905,769 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1874,574,007 - 74,904,564 (+)EnsemblGRCm39 Ensembl
GRCm381874,442,364 - 74,772,698 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1874,440,936 - 74,771,493 (+)EnsemblGRCm38mm10GRCm38
MGSCv371874,602,273 - 74,931,131 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361874,567,984 - 74,896,170 (+)NCBIMGSCv36mm8
Celera1875,677,935 - 75,995,786 (+)NCBICelera
Cytogenetic Map18E2NCBI
cM Map1850.7NCBI
Myo5b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540234,892,652 - 35,143,704 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540234,892,652 - 35,247,431 (-)NCBIChiLan1.0ChiLan1.0
MYO5B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21767,353,649 - 67,723,298 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11853,046,252 - 53,415,901 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01843,207,387 - 43,575,951 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11846,551,603 - 46,783,739 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1846,555,259 - 46,786,223 (-)Ensemblpanpan1.1panPan2
MYO5B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1778,671,636 - 79,006,010 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl778,671,616 - 79,006,006 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha778,076,067 - 78,407,834 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0778,734,540 - 79,067,184 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl778,734,614 - 79,067,103 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1778,448,208 - 78,782,608 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0778,479,066 - 78,811,670 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0778,763,776 - 79,096,706 (+)NCBIUU_Cfam_GSD_1.0
Myo5b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494437,781,039 - 37,998,722 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649712,932,789 - 13,234,244 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649712,932,367 - 13,236,916 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MYO5B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl199,418,449 - 99,810,139 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1199,418,242 - 99,810,934 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21109,021,575 - 109,119,992 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MYO5B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11830,759,345 - 31,143,139 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1830,759,764 - 31,143,474 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660504,906,479 - 5,290,645 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Myo5b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462477813,347,705 - 13,740,767 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462477813,352,285 - 13,740,621 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Myo5b
1924 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:264
Count of miRNA genes:170
Interacting mature miRNAs:194
Transcripts:ENSRNOT00000019512
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61367Iddm4Insulin dependent diabetes mellitus QTL 42.330.0074blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)183819245583192455Rat
61384Bp48Blood pressure QTL 4819.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)186062231177209844Rat
61429Cia17Collagen induced arthritis QTL 174.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)183135940870263868Rat
70185BpQTLcluster15Blood pressure QTL cluster 154.61arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)185971241776477814Rat
70185BpQTLcluster15Blood pressure QTL cluster 154.61arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)185971241776477814Rat
70185BpQTLcluster15Blood pressure QTL cluster 154.61arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)185971241776477814Rat
70185BpQTLcluster15Blood pressure QTL cluster 154.61arterial blood pressure trait (VT:2000000)absolute change in systolic blood pressure (CMO:0000607)185971241776477814Rat
724542Kidm2Kidney mass QTL 22.6kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)185917211583828827Rat
1298072Cia26Collagen induced arthritis QTL 263.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)185470976983828827Rat
631675Iddm15Insulin dependent diabetes mellitus QTL 15urine glucose amount (VT:0001758)percentage of study population developing diabetes mellitus during a period of time (CMO:0001114)186062231177209844Rat
738005Anxrr11Anxiety related response QTL 113.4exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)183003981375039813Rat
738008Hcar14Hepatocarcinoma resistance QTL 144.3liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion number (CMO:0001462)185146473383218561Rat
631274Sprol1Serum protein level QTL 15.3blood total protein amount (VT:0005567)serum total protein level (CMO:0000661)183139332077209694Rat
631509Sald2Serum aldosterone level QTL 22.9blood aldosterone amount (VT:0005346)serum aldosterone level (CMO:0000487)185253976369140759Rat
631518Bw11Body weight QTL 112.8body mass (VT:0001259)body weight (CMO:0000012)183587072380870723Rat
1331733Bp233Blood pressure QTL 2333.97196arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182479697779788953Rat
1331741Bp232Blood pressure QTL 2323.59112arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)182137289383213037Rat
1331754Bp230Blood pressure QTL 2304.61609arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182979296574792965Rat
1331770Bp234Blood pressure QTL 2343.807arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)185979647871893566Rat
1359020Ppulsi2Prepulse inhibition QTL 22.71prepulse inhibition trait (VT:0003088)acoustic startle response measurement (CMO:0001519)185229287573997283Rat
1598826Anxrr20Anxiety related response QTL 203.04body movement coordination trait (VT:0005424)number of rearing movements in an experimental apparatus (CMO:0001752)184143297183828827Rat
1600373Mamtr6Mammary tumor resistance QTL 6mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)181927890183218561Rat
1578661Bss20Bone structure and strength QTL 203.7femur morphology trait (VT:0000559)femoral neck cross-sectional area (CMO:0001697)181179151883218561Rat
1578667Bss21Bone structure and strength QTL 213.5femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)181179151883218561Rat
2303120Mamtr8Mammary tumor resistance QTL 80.001mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)183135940883218561Rat
2303571Bw92Body weight QTL 923body mass (VT:0001259)body weight (CMO:0000012)184852004483828827Rat
2303584Gluco55Glucose level QTL 552blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)184852004483828827Rat
2300157Bmd66Bone mineral density QTL 6613.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)182896485373964853Rat
2300177Bmd65Bone mineral density QTL 6519.70.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)182896485373964853Rat
2301417Bp319Blood pressure QTL 3190.002arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)185253976376104388Rat
2293704Bss35Bone structure and strength QTL 354.590.0002femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)182896485373964853Rat
2301969Bp324Blood pressure QTL 3244.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)185971241776477814Rat
2312600Bp341Blood pressure QTL 3410.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)185933040970263868Rat
2325839Bp348Blood pressure QTL 3480.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182557098570570985Rat
6893683Bw110Body weight QTL 1102.70.002body mass (VT:0001259)body weight (CMO:0000012)184334502283828827Rat
6903353Bp353Blood pressure QTL 3532.8arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)185979647883828827Rat
6903356Bp354Blood pressure QTL 3544.6arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)185979647883828827Rat
9589816Gluco68Glucose level QTL 687.250.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)182979296574792965Rat
8694366Abfw8Abdominal fat weight QTL 86.380.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)184664067583828827Rat
8694378Bw157Body weight QTL 1573.590.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)182979296574792965Rat
9590318Scort22Serum corticosterone level QTL 227.640.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)182979296574792965Rat
8694432Bw165Body weight QTL 1653.810.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)184664067583828827Rat
9589041Epfw12Epididymal fat weight QTL 1217.080.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)184664067583828827Rat
12880368Bw187Body weight QTL 1870.045body mass (VT:0001259)body weight (CMO:0000012)185253976376104388Rat
12904067Cm122Cardiac mass QTL 1220.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)185253976376104388Rat
12904069Cm123Cardiac mass QTL 1230.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)185253976376104388Rat
12904070Cm124Cardiac mass QTL 1240.01heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)185253976376104388Rat
12904071Am18Aortic mass QTL 180.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)185253976376104388Rat
12904073Kidm71Kidney mass QTL 710.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)185253976376104388Rat

Markers in Region
D18Rat10  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21868,058,657 - 68,058,814 (+)MAPPERmRatBN7.2
Rnor_6.01870,446,814 - 70,446,970NCBIRnor6.0
Rnor_5.01869,587,777 - 69,587,933UniSTSRnor5.0
RGSC_v3.41871,265,847 - 71,266,175RGDRGSC3.4
RGSC_v3.41871,265,925 - 71,266,081UniSTSRGSC3.4
RGSC_v3.11871,339,126 - 71,339,282RGD
Celera1866,236,361 - 66,236,517UniSTS
RH 3.4 Map18686.9RGD
RH 3.4 Map18686.9UniSTS
RH 2.0 Map18242.1RGD
SHRSP x BN Map1842.1199RGD
Cytogenetic Map18q12.2-q12.3UniSTS
BF403782  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21868,313,892 - 68,313,994 (+)MAPPERmRatBN7.2
Rnor_6.01870,702,613 - 70,702,714NCBIRnor6.0
Rnor_5.01869,842,127 - 69,842,228UniSTSRnor5.0
RGSC_v3.41871,556,004 - 71,556,105UniSTSRGSC3.4
Celera1866,490,362 - 66,490,463UniSTS
RH 3.4 Map18689.2UniSTS
Cytogenetic Map18q12.2-q12.3UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 2 25 31 12 11
Low 1 43 57 41 19 41 49 4 29
Below cutoff 8 10 8

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_017083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006254908 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008772085 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008772086 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017600852 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017600853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017600854 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017600855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017600856 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039096575 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039096576 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063277098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063277099 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063277100 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063277101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063277102 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063277103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063277104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063277105 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide CH474095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U60416 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSRNOT00000019512   ⟹   ENSRNOP00000019512
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1868,038,759 - 68,338,745 (+)Ensembl
Rnor_6.0 Ensembl1870,427,103 - 70,727,462 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000085318   ⟹   ENSRNOP00000069482
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1868,159,911 - 68,331,659 (+)Ensembl
Rnor_6.0 Ensembl1870,548,607 - 70,727,092 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000087959   ⟹   ENSRNOP00000072468
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1868,038,759 - 68,338,745 (+)Ensembl
Rnor_6.0 Ensembl1870,427,007 - 70,729,030 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000094389   ⟹   ENSRNOP00000081367
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1868,125,244 - 68,338,745 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000096247   ⟹   ENSRNOP00000079126
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1868,038,759 - 68,338,745 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000117025   ⟹   ENSRNOP00000091793
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1868,144,771 - 68,338,745 (+)Ensembl
RefSeq Acc Id: NM_017083   ⟹   NP_058779
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81870,313,976 - 70,613,918 (+)NCBI
mRatBN7.21868,038,759 - 68,338,745 (+)NCBI
Rnor_6.01870,427,103 - 70,727,462 (+)NCBI
Rnor_5.01869,568,169 - 69,869,070 (+)NCBI
RGSC_v3.41871,381,068 - 71,580,824 (+)RGD
Celera1866,217,242 - 66,515,213 (+)RGD
Sequence:
RefSeq Acc Id: XM_006254908   ⟹   XP_006254970
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81870,478,386 - 70,613,918 (+)NCBI
mRatBN7.21868,203,112 - 68,341,568 (+)NCBI
Rnor_6.01870,591,613 - 70,729,985 (+)NCBI
Rnor_5.01869,568,169 - 69,869,070 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008772085   ⟹   XP_008770307
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81870,400,405 - 70,613,918 (+)NCBI
mRatBN7.21868,125,211 - 68,341,568 (+)NCBI
Rnor_6.01870,513,791 - 70,729,985 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008772086   ⟹   XP_008770308
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81870,400,405 - 70,613,918 (+)NCBI
mRatBN7.21868,125,211 - 68,338,375 (+)NCBI
Rnor_6.01870,513,791 - 70,729,985 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017600852   ⟹   XP_017456341
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81870,400,405 - 70,613,918 (+)NCBI
mRatBN7.21868,125,211 - 68,341,568 (+)NCBI
Rnor_6.01870,513,791 - 70,729,985 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017600854   ⟹   XP_017456343
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81870,432,325 - 70,613,918 (+)NCBI
mRatBN7.21868,157,158 - 68,338,375 (+)NCBI
Rnor_6.01870,545,760 - 70,729,985 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017600855   ⟹   XP_017456344
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81870,400,405 - 70,613,918 (+)NCBI
mRatBN7.21868,125,211 - 68,341,568 (+)NCBI
Rnor_6.01870,513,791 - 70,729,985 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039096575   ⟹   XP_038952503
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81870,400,405 - 70,613,918 (+)NCBI
mRatBN7.21868,125,211 - 68,341,568 (+)NCBI
RefSeq Acc Id: XM_039096576   ⟹   XP_038952504
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81870,544,183 - 70,613,918 (+)NCBI
mRatBN7.21868,264,441 - 68,341,568 (+)NCBI
RefSeq Acc Id: XM_063277098   ⟹   XP_063133168
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81870,400,405 - 70,613,918 (+)NCBI
RefSeq Acc Id: XM_063277099   ⟹   XP_063133169
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81870,400,212 - 70,613,918 (+)NCBI
RefSeq Acc Id: XM_063277100   ⟹   XP_063133170
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81870,313,717 - 70,613,918 (+)NCBI
RefSeq Acc Id: XM_063277101   ⟹   XP_063133171
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81870,400,405 - 70,613,918 (+)NCBI
RefSeq Acc Id: XM_063277102   ⟹   XP_063133172
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81870,400,405 - 70,613,918 (+)NCBI
RefSeq Acc Id: XM_063277103   ⟹   XP_063133173
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81870,400,405 - 70,613,918 (+)NCBI
RefSeq Acc Id: XM_063277104   ⟹   XP_063133174
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81870,400,420 - 70,613,918 (+)NCBI
RefSeq Acc Id: XM_063277105   ⟹   XP_063133175
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81870,410,329 - 70,613,918 (+)NCBI
Protein Sequences
Protein RefSeqs NP_058779 (Get FASTA)   NCBI Sequence Viewer  
  XP_006254970 (Get FASTA)   NCBI Sequence Viewer  
  XP_008770307 (Get FASTA)   NCBI Sequence Viewer  
  XP_008770308 (Get FASTA)   NCBI Sequence Viewer  
  XP_017456341 (Get FASTA)   NCBI Sequence Viewer  
  XP_017456343 (Get FASTA)   NCBI Sequence Viewer  
  XP_017456344 (Get FASTA)   NCBI Sequence Viewer  
  XP_038952503 (Get FASTA)   NCBI Sequence Viewer  
  XP_038952504 (Get FASTA)   NCBI Sequence Viewer  
  XP_063133168 (Get FASTA)   NCBI Sequence Viewer  
  XP_063133169 (Get FASTA)   NCBI Sequence Viewer  
  XP_063133170 (Get FASTA)   NCBI Sequence Viewer  
  XP_063133171 (Get FASTA)   NCBI Sequence Viewer  
  XP_063133172 (Get FASTA)   NCBI Sequence Viewer  
  XP_063133173 (Get FASTA)   NCBI Sequence Viewer  
  XP_063133174 (Get FASTA)   NCBI Sequence Viewer  
  XP_063133175 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAB38840 (Get FASTA)   NCBI Sequence Viewer  
  EDL82886 (Get FASTA)   NCBI Sequence Viewer  
  EDL82887 (Get FASTA)   NCBI Sequence Viewer  
  EDL82888 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000019512
  ENSRNOP00000019512.6
  ENSRNOP00000069482
  ENSRNOP00000069482.2
  ENSRNOP00000072468.2
  ENSRNOP00000079126.1
  ENSRNOP00000081367
  ENSRNOP00000081367.1
  ENSRNOP00000091793.1
GenBank Protein P70569 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_058779   ⟸   NM_017083
- UniProtKB: F1M3R4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006254970   ⟸   XM_006254908
- Peptide Label: isoform X14
- UniProtKB: F1M3R4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008770307   ⟸   XM_008772085
- Peptide Label: isoform X1
- UniProtKB: F1M3R4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008770308   ⟸   XM_008772086
- Peptide Label: isoform X7
- UniProtKB: A0A8I6ACS1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017456344   ⟸   XM_017600855
- Peptide Label: isoform X6
- UniProtKB: A0A8I5ZST3 (UniProtKB/TrEMBL),   A0A8I6ACS1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017456341   ⟸   XM_017600852
- Peptide Label: isoform X2
- UniProtKB: F1M3R4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017456343   ⟸   XM_017600854
- Peptide Label: isoform X3
- UniProtKB: F1M3R4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000069482   ⟸   ENSRNOT00000085318
RefSeq Acc Id: ENSRNOP00000072468   ⟸   ENSRNOT00000087959
RefSeq Acc Id: ENSRNOP00000019512   ⟸   ENSRNOT00000019512
RefSeq Acc Id: XP_038952503   ⟸   XM_039096575
- Peptide Label: isoform X10
- UniProtKB: A0A8I6G4V2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038952504   ⟸   XM_039096576
- Peptide Label: isoform X15
- UniProtKB: A6KRF7 (UniProtKB/TrEMBL),   A6KRF8 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSRNOP00000079126   ⟸   ENSRNOT00000096247
RefSeq Acc Id: ENSRNOP00000081367   ⟸   ENSRNOT00000094389
RefSeq Acc Id: ENSRNOP00000091793   ⟸   ENSRNOT00000117025
RefSeq Acc Id: XP_063133170   ⟸   XM_063277100
- Peptide Label: isoform X8
- UniProtKB: F1M3R4 (UniProtKB/TrEMBL),   A0A0G2K318 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063133169   ⟸   XM_063277099
- Peptide Label: isoform X5
- UniProtKB: F1M3R4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063133168   ⟸   XM_063277098
- Peptide Label: isoform X4
- UniProtKB: F1M3R4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063133172   ⟸   XM_063277102
- Peptide Label: isoform X11
- UniProtKB: A0A8I6G4V2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063133171   ⟸   XM_063277101
- Peptide Label: isoform X9
- UniProtKB: A0A8I6ACS1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063133173   ⟸   XM_063277103
- Peptide Label: isoform X12
- UniProtKB: A0A8I6G4V2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063133174   ⟸   XM_063277104
- Peptide Label: isoform X13
- UniProtKB: F1M3R4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063133175   ⟸   XM_063277105
- Peptide Label: isoform X13
- UniProtKB: F1M3R4 (UniProtKB/TrEMBL)
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P70569-F1-model_v2 AlphaFold P70569 1-1846 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13700866
Promoter ID:EPDNEW_R11389
Type:initiation region
Name:Myo5b_1
Description:myosin Vb
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01870,427,065 - 70,427,125EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:621347 AgrOrtholog
BioCyc Gene G2FUF-7025 BioCyc
Ensembl Genes ENSRNOG00000014104 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000019512 ENTREZGENE
  ENSRNOT00000019512.7 UniProtKB/TrEMBL
  ENSRNOT00000085318.2 UniProtKB/TrEMBL
  ENSRNOT00000087959.2 UniProtKB/TrEMBL
  ENSRNOT00000094389.1 UniProtKB/TrEMBL
  ENSRNOT00000096247.1 UniProtKB/TrEMBL
  ENSRNOT00000117025.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.10.820 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  1.20.5.190 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  1.20.58.530 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.30.70.1590 UniProtKB/TrEMBL
  3.40.850.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  6.20.240.20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Myosin VI head, motor domain, U50 subdomain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Dilute_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  IQ_motif_EF-hand-BS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kinesin_motor_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Myo5b_CBD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Myosin_head_motor_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Myosin_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MYSc_Myo5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:25132 UniProtKB/Swiss-Prot
NCBI Gene 25132 ENTREZGENE
PANTHER DILUTE DOMAIN-CONTAINING PROTEIN YPR089W UniProtKB/TrEMBL
  MYOSIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MYOSIN VB UniProtKB/TrEMBL
  UNCONVENTIONAL MYOSIN-VB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam DIL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Myosin_head UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PF00612 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Myo5b PhenoGen
PRINTS MYOSINHEAVY UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE DILUTE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MYOSIN_MOTOR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PS50096 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3_LIKE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000014104 RatGTEx
SMART DIL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MYSc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00015 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0G2JVH1_RAT UniProtKB/TrEMBL
  A0A0G2K318 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZST3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6ACS1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6G4V2 ENTREZGENE, UniProtKB/TrEMBL
  A6KRF7 ENTREZGENE, UniProtKB/TrEMBL
  A6KRF8 ENTREZGENE, UniProtKB/TrEMBL
  A6KRF9_RAT UniProtKB/TrEMBL
  F1M3R4 ENTREZGENE, UniProtKB/TrEMBL
  MYO5B_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-05-27 Myo5b  myosin Vb  Myo5b  myosin 5B  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2003-04-09 Myo5b  myosin 5B      Symbol and Name updated 629477 APPROVED
2003-03-06 Myo5b  myosin 5B  Myr6  Myosin of the dilute-myosin-V family  Data merged from RGD:3147 628472 PROVISIONAL
2002-08-07 Myo5b        Symbol and Name status set to provisional 70820 PROVISIONAL
2002-06-10 Myr6  Myosin of the dilute-myosin-V family      Symbol and Name status set to approved 70586 APPROVED

RGD Curation Notes
Note Type Note Reference
gene_expression expressed in brain, highest expression in choroid plexus and the limbic system, 633433