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Gene: Chsy3 (chondroitin sulfate synthase 3) Rattus norvegicus
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Symbol: Chsy3
Name: chondroitin sulfate synthase 3
RGD ID: 1560819
Description: Predicted to have acetylgalactosaminyltransferase activity. Predicted to localize to Golgi cisterna membrane. Orthologous to human CHSY3 (chondroitin sulfate synthase 3); PARTICIPATES IN chondroitin sulfate biosynthetic pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; bisphenol A.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC291577; RGD1560819; similar to chondroitin sulfate synthase 3
Orthologs:
Homo sapiens (human) : CHSY3 (chondroitin sulfate synthase 3)  HGNC  Alliance
Mus musculus (house mouse) : Chsy3 (chondroitin sulfate synthase 3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Chsy3 (chondroitin sulfate synthase 3)
Pan paniscus (bonobo/pygmy chimpanzee) : CHSY3 (chondroitin sulfate synthase 3)
Canis lupus familiaris (dog) : CHSY3 (chondroitin sulfate synthase 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Chsy3 (chondroitin sulfate synthase 3)
Sus scrofa (pig) : CHSY3 (chondroitin sulfate synthase 3)
Chlorocebus sabaeus (African green monkey) : CHSY3 (chondroitin sulfate synthase 3)
Heterocephalus glaber (naked mole-rat) : Chsy3 (chondroitin sulfate synthase 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01854,243,626 - 54,497,475 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1854,243,949 - 54,496,585 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01853,477,339 - 53,731,655 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41854,963,517 - 55,273,226 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1850,748,557 - 51,001,455 (+)NCBICelera
Cytogenetic Map18q12.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Chsy3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1560819
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-09-01
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.